Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246618
Identifier: 154246618
GI number: 154246618
Start: 2966144
End: 2966542
Strand: Reverse
Name: 154246618
Synonym: Xaut_2678
Alternate gene names: NA
Gene position: 2966542-2966144 (Counterclockwise)
Preceding gene: 154246620
Following gene: 154246617
Centisome position: 55.88
GC content: 65.41
Gene sequence:
>399_bases ATGAAGCCACGTCGCTACGAGATCACGGACTTCGAGTGGTCGATCATCGCGCCGCTGTTGCCGAACAAGCCGCGGGGTGT GGCGCGTGTCGATGACCGCAGGGTGCTCAATGGGATTTTCTGGCGGCTGCGCACCGGCTCTCCCTGGGCCGACATCCCTG AGCGCTACGGGCCGTGTACGACCTGCTACAACCGCTTTGTGCGCTGGCGGAAGGCCGGTGTCTGGGATCGGCTGTTCGCG GCTGTCTCGCGGGCCTATGATGGCGACCTGCAGATGATCGACAGTTCGTCGATCCGCGTTCATCAGCACGCGGCCAACGT CAAAAAGGGGGTGCGGCGGAAGCCGTCGCTGGGGACGTCACTCCTGCCCGATGCATGGGGCGCTCGCGCGGCGGACTGA
Upstream 100 bases:
>100_bases TTTGCGCTATCTCCACCCAAGGTACTCTTTAGGTCATCAACCCATAAAACTGTAGCGCCGACGCGGCGTTGGCTGATTCA AGGTAGCCGGAGGTGCTGCC
Downstream 100 bases:
>100_bases CCACCAAGATCCACGCCGTGGTGGACGCCAACGGCAACCCCATCGCGCTCAAGCTGACTGAAGGCCAGGCGCATGATGGT CGCAGTGCTGCTGATCTGCT
Product: ISBm1, transposase orfA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKPRRYEITDFEWSIIAPLLPNKPRGVARVDDRRVLNGIFWRLRTGSPWADIPERYGPCTTCYNRFVRWRKAGVWDRLFA AVSRAYDGDLQMIDSSSIRVHQHAANVKKGVRRKPSLGTSLLPDAWGARAAD
Sequences:
>Translated_132_residues MKPRRYEITDFEWSIIAPLLPNKPRGVARVDDRRVLNGIFWRLRTGSPWADIPERYGPCTTCYNRFVRWRKAGVWDRLFA AVSRAYDGDLQMIDSSSIRVHQHAANVKKGVRRKPSLGTSLLPDAWGARAAD >Mature_132_residues MKPRRYEITDFEWSIIAPLLPNKPRGVARVDDRRVLNGIFWRLRTGSPWADIPERYGPCTTCYNRFVRWRKAGVWDRLFA AVSRAYDGDLQMIDSSSIRVHQHAANVKKGVRRKPSLGTSLLPDAWGARAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To transposase of insertion sequence IS6501 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15168; Mature: 15168
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRRYEITDFEWSIIAPLLPNKPRGVARVDDRRVLNGIFWRLRTGSPWADIPERYGPCT CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCHH TCYNRFVRWRKAGVWDRLFAAVSRAYDGDLQMIDSSSIRVHQHAANVKKGVRRKPSLGTS HHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHHCCCCCCCCC LLPDAWGARAAD CCCCCCCCCCCC >Mature Secondary Structure MKPRRYEITDFEWSIIAPLLPNKPRGVARVDDRRVLNGIFWRLRTGSPWADIPERYGPCT CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCHH TCYNRFVRWRKAGVWDRLFAAVSRAYDGDLQMIDSSSIRVHQHAANVKKGVRRKPSLGTS HHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHHCCCCCCCCC LLPDAWGARAAD CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8190622 [H]