Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is icfG [H]
Identifier: 154246461
GI number: 154246461
Start: 2815782
End: 2817833
Strand: Reverse
Name: icfG [H]
Synonym: Xaut_2520
Alternate gene names: 154246461
Gene position: 2817833-2815782 (Counterclockwise)
Preceding gene: 154246462
Following gene: 154246460
Centisome position: 53.08
GC content: 69.35
Gene sequence:
>2052_bases ATGCTGCTGCGTACCCGCATCACCCTGATCGTCGCCATCGGCTTCGCCGTCCTCATGCTGGGCATCTGGGGCGCCACCCT GCTGCGCGACCGCGTGGCCGAGACCCAGGAGGCGGAGCTGGCCATCGAGGGCCAGACCGTGCTCTGGCGCGAGATCGTCG CGTTCCAGACCTCGAACCTCGCCCGTATCCTCGAGCGGGTGGACAGCTCCGCCGCCTTCCGCATCGCGCTCGGCTTCTCC GACCGGCCGGGCGTTGCCGCCGCCATCCGCGAGCTCGGCGTCAACATCAACGACGACGACACCTATTTCGAGGTGATGAC CGCCGACCGCGAGGTGGTGTTCAGCGACGGCGGCACCGCCAACCGCTACATCCTCGACGCCGGCAGCCTCGACCGGGCGC TCAAGGGCGAGGTGCTCTCCGGCCTGCGGCAGGTGGGCGCCAACCAGGTGGTCGTGCTGACCACCCGCACCGTGGAGCTT CCCGGCAAGGGCACAGCCGTGCTCATCCTCGGGCGCGACGCCGCCCTCGGCATGGAGCGCTTCGCCCGCGGCCTCACCGC AACGACCACCCTCGTCACCCTGCGCGGCCGGGTGGTGGCTAGTACCGACTTCCGCTTGTGGGAACGGGCCAAGCTCTCCA TCACGCCGCGCCGGCCCACCTCCGAGCGCATGGTGCTGGACGGGCGCAACTACAACGTCACCAGCATCCCCATTTCAGAC ATCAGCGCCAGCACCGTGGGTGCGCTGGTGAGCTTCGAGGACACCACCGAGACCGTCCAGGCGACCGCCTTCATCCGCCA GTCGGCAGTGACCGGCGCCATCGGCCTGGTGCTGATCGGCGTCATCGGGCTCAACGTGTTCCTCTGGTACAGCTTCCGGC CGCTGGAATCGGCCATCGACGTGCTGCAGGCGCTGGCGCGGGGCGACACCTCCGTCACCGTCGGCCACGTGGGCAACGAC GAGATCGGCCGCATCGCCTCCGCCGTGCTCGCCTTGCGCGGTAATGTGCAGGCCCTTGCCGAGACCCGGCGCCAGCGCGA GCGCGTGCGCCGCCGGCAGGAGGCGGTCATCTCCGCCGAGTTGCAGGCGCTGGCCGACGCCATCGACCCCACCGACCGCG AGGAAGTGCTCGCGCTGCTCGCCAAGGGTTCCGAGGGCGAGCAGGACGACGAGCTGCGGCGCGTCGCCCGCGTGCTGCAC GACCTGTCGCGGCGCATCGTGGAGCAGCACACCCGGCTGTCCTCCATGGTGGTGGAACTGCGCGAAGCCCTCATCACCAA GACCAAGCTCGCCGGCCTGCAGCAGGAGCTGGAGATCGCCCGGCAGGTGCAGCTCGCCATCCTGCCCAAGGAATTCCCGC CGGACGCCCGCGTCGCCATCCACGGCCAGATGACGCCGGCCCGCGAGGTGGGCGGCGACTTCTACGACTACTTCATGATC GACGACACCAACTTGGGCTTCGTGGTGGCGGATGTCTCCGGCAAGGGCGTGCCGGCGGCCCTGTTCATGGCCATCGCCCG CACACTGCTGCGCTCCACCGCCCTGTTCGAGCGCTCGCCGGCCAGCTCTATCCGCCGCCTCAACGACCTGCTGGCGGTGG AGAACGAGCAGATGCTGTTCGTCACCGTGCTCTACGGCGTGATCGACCTGTCATCCGGGCGCGTCACCTATGTGAATGCC GGCCACAACCTGCCCTATCGCATCACCCGCGCGGGTGAGGTCTCCACCGTGCCCTCCACCGGCGGCATGGCGGTGGCGGT GCTGGAGGGCTTCGTCTACGTGGAGCACGAGCTGCATCTCCAGCCGGGCGACACGCTCTTCCTCTACACCGACGGCGTCA ACGAGGCGTTCGACGTGGACGAGAAGCCCTATGGCGAGGAACGGCTGGAAGACCTGCTCCGCAGCGGCGCCGCGGACTGG TCGGTGCCCGAACTGTCGGAGCGGGTGCTGGCCTCGGTCCATGTGTTCGAACGCGGCGCGCCGCAGGCCGACGACATCAC CTGCCTGACGCTGCGGTACTTCGGTGGCCACGGACCGCGCCGTACCAGGTAA
Upstream 100 bases:
>100_bases TGGCGGTGGATTTCGACGGCGGGCTGCGGCCGGACGTAGAACGAGTGCGGCGCGAGGTGATGGCCCCGCCCGGCGCGGCT GAGACGGAACGAGGGGTCTG
Downstream 100 bases:
>100_bases GCGCCAGATGAGCACGAAGGCCGCAACGGACCGTGCGCAAACGTGAAGGCCCGCGCCCCGCTTCGAGGGTGACGGCGTCG GCGGCAACAGGGTAAGACAC
Product: stage II sporulation E family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 683; Mature: 683
Protein sequence:
>683_residues MLLRTRITLIVAIGFAVLMLGIWGATLLRDRVAETQEAELAIEGQTVLWREIVAFQTSNLARILERVDSSAAFRIALGFS DRPGVAAAIRELGVNINDDDTYFEVMTADREVVFSDGGTANRYILDAGSLDRALKGEVLSGLRQVGANQVVVLTTRTVEL PGKGTAVLILGRDAALGMERFARGLTATTTLVTLRGRVVASTDFRLWERAKLSITPRRPTSERMVLDGRNYNVTSIPISD ISASTVGALVSFEDTTETVQATAFIRQSAVTGAIGLVLIGVIGLNVFLWYSFRPLESAIDVLQALARGDTSVTVGHVGND EIGRIASAVLALRGNVQALAETRRQRERVRRRQEAVISAELQALADAIDPTDREEVLALLAKGSEGEQDDELRRVARVLH DLSRRIVEQHTRLSSMVVELREALITKTKLAGLQQELEIARQVQLAILPKEFPPDARVAIHGQMTPAREVGGDFYDYFMI DDTNLGFVVADVSGKGVPAALFMAIARTLLRSTALFERSPASSIRRLNDLLAVENEQMLFVTVLYGVIDLSSGRVTYVNA GHNLPYRITRAGEVSTVPSTGGMAVAVLEGFVYVEHELHLQPGDTLFLYTDGVNEAFDVDEKPYGEERLEDLLRSGAADW SVPELSERVLASVHVFERGAPQADDITCLTLRYFGGHGPRRTR
Sequences:
>Translated_683_residues MLLRTRITLIVAIGFAVLMLGIWGATLLRDRVAETQEAELAIEGQTVLWREIVAFQTSNLARILERVDSSAAFRIALGFS DRPGVAAAIRELGVNINDDDTYFEVMTADREVVFSDGGTANRYILDAGSLDRALKGEVLSGLRQVGANQVVVLTTRTVEL PGKGTAVLILGRDAALGMERFARGLTATTTLVTLRGRVVASTDFRLWERAKLSITPRRPTSERMVLDGRNYNVTSIPISD ISASTVGALVSFEDTTETVQATAFIRQSAVTGAIGLVLIGVIGLNVFLWYSFRPLESAIDVLQALARGDTSVTVGHVGND EIGRIASAVLALRGNVQALAETRRQRERVRRRQEAVISAELQALADAIDPTDREEVLALLAKGSEGEQDDELRRVARVLH DLSRRIVEQHTRLSSMVVELREALITKTKLAGLQQELEIARQVQLAILPKEFPPDARVAIHGQMTPAREVGGDFYDYFMI DDTNLGFVVADVSGKGVPAALFMAIARTLLRSTALFERSPASSIRRLNDLLAVENEQMLFVTVLYGVIDLSSGRVTYVNA GHNLPYRITRAGEVSTVPSTGGMAVAVLEGFVYVEHELHLQPGDTLFLYTDGVNEAFDVDEKPYGEERLEDLLRSGAADW SVPELSERVLASVHVFERGAPQADDITCLTLRYFGGHGPRRTR >Mature_683_residues MLLRTRITLIVAIGFAVLMLGIWGATLLRDRVAETQEAELAIEGQTVLWREIVAFQTSNLARILERVDSSAAFRIALGFS DRPGVAAAIRELGVNINDDDTYFEVMTADREVVFSDGGTANRYILDAGSLDRALKGEVLSGLRQVGANQVVVLTTRTVEL PGKGTAVLILGRDAALGMERFARGLTATTTLVTLRGRVVASTDFRLWERAKLSITPRRPTSERMVLDGRNYNVTSIPISD ISASTVGALVSFEDTTETVQATAFIRQSAVTGAIGLVLIGVIGLNVFLWYSFRPLESAIDVLQALARGDTSVTVGHVGND EIGRIASAVLALRGNVQALAETRRQRERVRRRQEAVISAELQALADAIDPTDREEVLALLAKGSEGEQDDELRRVARVLH DLSRRIVEQHTRLSSMVVELREALITKTKLAGLQQELEIARQVQLAILPKEFPPDARVAIHGQMTPAREVGGDFYDYFMI DDTNLGFVVADVSGKGVPAALFMAIARTLLRSTALFERSPASSIRRLNDLLAVENEQMLFVTVLYGVIDLSSGRVTYVNA GHNLPYRITRAGEVSTVPSTGGMAVAVLEGFVYVEHELHLQPGDTLFLYTDGVNEAFDVDEKPYGEERLEDLLRSGAADW SVPELSERVLASVHVFERGAPQADDITCLTLRYFGGHGPRRTR
Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003660 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]
EC number: NA
Molecular weight: Translated: 74706; Mature: 74706
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50885 HAMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRTRITLIVAIGFAVLMLGIWGATLLRDRVAETQEAELAIEGQTVLWREIVAFQTSNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCHH ARILERVDSSAAFRIALGFSDRPGVAAAIRELGVNINDDDTYFEVMTADREVVFSDGGTA HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCC NRYILDAGSLDRALKGEVLSGLRQVGANQVVVLTTRTVELPGKGTAVLILGRDAALGMER CEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEEEECCCHHHHHHH FARGLTATTTLVTLRGRVVASTDFRLWERAKLSITPRRPTSERMVLDGRNYNVTSIPISD HHCCCHHHHEEEEECCEEEEECCHHHHHCCEEEECCCCCCCCCEEEECCCCEEEEEECCC ISASTVGALVSFEDTTETVQATAFIRQSAVTGAIGLVLIGVIGLNVFLWYSFRPLESAID CCHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHH VLQALARGDTSVTVGHVGNDEIGRIASAVLALRGNVQALAETRRQRERVRRRQEAVISAE HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LQALADAIDPTDREEVLALLAKGSEGEQDDELRRVARVLHDLSRRIVEQHTRLSSMVVEL HHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REALITKTKLAGLQQELEIARQVQLAILPKEFPPDARVAIHGQMTPAREVGGDFYDYFMI HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCHHHHCCCEEEEEEE DDTNLGFVVADVSGKGVPAALFMAIARTLLRSTALFERSPASSIRRLNDLLAVENEQMLF ECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEH VTVLYGVIDLSSGRVTYVNAGHNLPYRITRAGEVSTVPSTGGMAVAVLEGFVYVEHELHL HEEHHHHHCCCCCCEEEEECCCCCCEEEEECCCCEECCCCCCEEEEEECCEEEEEEEEEE QPGDTLFLYTDGVNEAFDVDEKPYGEERLEDLLRSGAADWSVPELSERVLASVHVFERGA CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC PQADDITCLTLRYFGGHGPRRTR CCCCCEEEEEEEEECCCCCCCCC >Mature Secondary Structure MLLRTRITLIVAIGFAVLMLGIWGATLLRDRVAETQEAELAIEGQTVLWREIVAFQTSNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCHH ARILERVDSSAAFRIALGFSDRPGVAAAIRELGVNINDDDTYFEVMTADREVVFSDGGTA HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCC NRYILDAGSLDRALKGEVLSGLRQVGANQVVVLTTRTVELPGKGTAVLILGRDAALGMER CEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEEEECCCHHHHHHH FARGLTATTTLVTLRGRVVASTDFRLWERAKLSITPRRPTSERMVLDGRNYNVTSIPISD HHCCCHHHHEEEEECCEEEEECCHHHHHCCEEEECCCCCCCCCEEEECCCCEEEEEECCC ISASTVGALVSFEDTTETVQATAFIRQSAVTGAIGLVLIGVIGLNVFLWYSFRPLESAID CCHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHH VLQALARGDTSVTVGHVGNDEIGRIASAVLALRGNVQALAETRRQRERVRRRQEAVISAE HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LQALADAIDPTDREEVLALLAKGSEGEQDDELRRVARVLHDLSRRIVEQHTRLSSMVVEL HHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REALITKTKLAGLQQELEIARQVQLAILPKEFPPDARVAIHGQMTPAREVGGDFYDYFMI HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCHHHHCCCEEEEEEE DDTNLGFVVADVSGKGVPAALFMAIARTLLRSTALFERSPASSIRRLNDLLAVENEQMLF ECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEH VTVLYGVIDLSSGRVTYVNAGHNLPYRITRAGEVSTVPSTGGMAVAVLEGFVYVEHELHL HEEHHHHHCCCCCCEEEEECCCCCCEEEEECCCCEECCCCCCEEEEEECCEEEEEEEEEE QPGDTLFLYTDGVNEAFDVDEKPYGEERLEDLLRSGAADWSVPELSERVLASVHVFERGA CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC PQADDITCLTLRYFGGHGPRRTR CCCCCEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8075401; 8905231 [H]