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The map label for this gene is glcD [H]

Identifier: 154246459

GI number: 154246459

Start: 2812672

End: 2814123

Strand: Direct

Name: glcD [H]

Synonym: Xaut_2518

Alternate gene names: 154246459

Gene position: 2812672-2814123 (Clockwise)

Preceding gene: 154246458

Following gene: 154246464

Centisome position: 52.98

GC content: 69.83

Gene sequence:

>1452_bases
ATGTCGAGCCACGCCCCGCATCCCGTCCTTCTCGATGCCGCCCGCCTTGCTGCGCTGCTGGAGCGCATCGCCGCGCGCAT
CGGTCCCGCCCGCGTGGTTACCGACGCGGCGGAGCTGGCCCCCTGGCTGGTGGAAGGACGTGGCCTGTTCCAGGGCGCCA
CCCCGGCCATGGTGGAGCCGGCGACCACGGACGAGGTGTCCTTCATCGTCGCCGCCTGCGCCGAGGCGGGGGTTCCCGTG
GTGCCGCAGGGCGGCAATACCGGTCTTGTGGGCGGGCAGGTGCCGTTCGGCGGCCTGCTCCTCTCGCTGCGGCGCATGAG
CCGCATCCGCGACCTTGACCCCATCGATCTCACCGTGGTGGCGGAAGCAGGCTGTACGCTCCATCAGGTACAGCAGGCGG
CGGCGGAGACGGGCTGCCTGTTCCCGCTCTCCATCGCCTCGGAAGGCAGCTGCCGCATCGGCGGCAACCTCTCCACCAAT
GCCGGCGGCACTGCCGTGCTGCGTTACGGTAACATGCGGGAACTCACGTTCGGGCTGGAAGTGGTGCTGCCGGACGGGCG
GATCTGGAACGGCCTCAGCCGCCTGCGCAAGGACAATACCGGCTACGCCCTGAAGGACCTGTTCATCGGTGCGGAAGGCA
CGCTCGGCATCATCACCGCCGCCGTGCTGCGGCTTTATCCGGCGCCACGCGCCCACGCCACCACGCTGACCGGCCTCGCA
AGCCCCGAGGCCGCTCTCAAGCTGTTCCAGCGGCTGCGCAATGTGGCGGGGGATGCGCTCACCGGCTTCGAGATCCTGCC
GCGCTTCGGCATGGAGACGGTGCTGACGCATATTCCCGGCACCACCCGCGCGCTGGCCGGCGACCACGGCTGGTATGCGC
TCGCCGAACTCACCTCCACCCGCCGCGACGACGACCTCTCCGCCTTGGCGCTGGAGGTGTTCGGCGAGGCGTTCGAGGCG
GGGGAGATCGAGGATGCGGTGATCGCCGCCAGCGAGGCCCAGGCCGAGGCCCTTTGGAAGCTGCGCGAGGCCCTGTCCGA
CGCCCAGAAGTTCGAGGGCGGCTCCATCAAGCACGACGTGTCGGTGCCGGTGTCGCGGGTGCCGCACTTCATCGCCGAGG
CGGCCCGCGCCTGCGAGGCCCATATGCCGGGGGTGCGGGTGTGCGCCTTCGGCCACATGGGCGACGGCAATATCCATTTC
AACCTGAGCCAGCCGGTGGGCATGGACAAGGCGGCCTATCTGGCCTGCTGGGAAGGCTTCAACCGCATCGTCCACGACAT
CGTGGCCGGGCTCGGCGGCTCCATCTCGGCAGAGCACGGCATCGGCCTGCTCAAGCGCGAGGAACTGCCGCTCTACAAGG
ACCCGGTGGCGCTGGAGCTGATGGCGGCCATCAAGGCCGCCATCGATCCCAAGGGCCTCGCCAATCCCGGCAAGGTGCTG
CCGGGCGGGTAG

Upstream 100 bases:

>100_bases
TCGACGCTCCGACTGCGCAGTCGCTGGTCCGGGATGCGATTCCGCACCGCACCCAACCCGGCCCTTGCGGAGCCTGGGGC
CGTGCGGCACCCTCCCGGCC

Downstream 100 bases:

>100_bases
GACCCGTTTGAAAAATCGCTTGGATGGACGCCTGCAACCCGCGATGGGGCTTTCTCTCCGTCATGGCCGGGACAAGCCCG
GGCATGACGGGGTGATTGCG

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSSHAPHPVLLDAARLAALLERIAARIGPARVVTDAAELAPWLVEGRGLFQGATPAMVEPATTDEVSFIVAACAEAGVPV
VPQGGNTGLVGGQVPFGGLLLSLRRMSRIRDLDPIDLTVVAEAGCTLHQVQQAAAETGCLFPLSIASEGSCRIGGNLSTN
AGGTAVLRYGNMRELTFGLEVVLPDGRIWNGLSRLRKDNTGYALKDLFIGAEGTLGIITAAVLRLYPAPRAHATTLTGLA
SPEAALKLFQRLRNVAGDALTGFEILPRFGMETVLTHIPGTTRALAGDHGWYALAELTSTRRDDDLSALALEVFGEAFEA
GEIEDAVIAASEAQAEALWKLREALSDAQKFEGGSIKHDVSVPVSRVPHFIAEAARACEAHMPGVRVCAFGHMGDGNIHF
NLSQPVGMDKAAYLACWEGFNRIVHDIVAGLGGSISAEHGIGLLKREELPLYKDPVALELMAAIKAAIDPKGLANPGKVL
PGG

Sequences:

>Translated_483_residues
MSSHAPHPVLLDAARLAALLERIAARIGPARVVTDAAELAPWLVEGRGLFQGATPAMVEPATTDEVSFIVAACAEAGVPV
VPQGGNTGLVGGQVPFGGLLLSLRRMSRIRDLDPIDLTVVAEAGCTLHQVQQAAAETGCLFPLSIASEGSCRIGGNLSTN
AGGTAVLRYGNMRELTFGLEVVLPDGRIWNGLSRLRKDNTGYALKDLFIGAEGTLGIITAAVLRLYPAPRAHATTLTGLA
SPEAALKLFQRLRNVAGDALTGFEILPRFGMETVLTHIPGTTRALAGDHGWYALAELTSTRRDDDLSALALEVFGEAFEA
GEIEDAVIAASEAQAEALWKLREALSDAQKFEGGSIKHDVSVPVSRVPHFIAEAARACEAHMPGVRVCAFGHMGDGNIHF
NLSQPVGMDKAAYLACWEGFNRIVHDIVAGLGGSISAEHGIGLLKREELPLYKDPVALELMAAIKAAIDPKGLANPGKVL
PGG
>Mature_482_residues
SSHAPHPVLLDAARLAALLERIAARIGPARVVTDAAELAPWLVEGRGLFQGATPAMVEPATTDEVSFIVAACAEAGVPVV
PQGGNTGLVGGQVPFGGLLLSLRRMSRIRDLDPIDLTVVAEAGCTLHQVQQAAAETGCLFPLSIASEGSCRIGGNLSTNA
GGTAVLRYGNMRELTFGLEVVLPDGRIWNGLSRLRKDNTGYALKDLFIGAEGTLGIITAAVLRLYPAPRAHATTLTGLAS
PEAALKLFQRLRNVAGDALTGFEILPRFGMETVLTHIPGTTRALAGDHGWYALAELTSTRRDDDLSALALEVFGEAFEAG
EIEDAVIAASEAQAEALWKLREALSDAQKFEGGSIKHDVSVPVSRVPHFIAEAARACEAHMPGVRVCAFGHMGDGNIHFN
LSQPVGMDKAAYLACWEGFNRIVHDIVAGLGGSISAEHGIGLLKREELPLYKDPVALELMAAIKAAIDPKGLANPGKVLP
GG

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=457, Percent_Identity=37.636761487965, Blast_Score=290, Evalue=3e-78,
Organism=Homo sapiens, GI37595756, Length=447, Percent_Identity=33.5570469798658, Blast_Score=188, Evalue=8e-48,
Organism=Homo sapiens, GI37595754, Length=465, Percent_Identity=31.8279569892473, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI4501993, Length=187, Percent_Identity=28.8770053475936, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1789351, Length=451, Percent_Identity=28.6031042128603, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1787977, Length=521, Percent_Identity=24.3761996161228, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI48994907, Length=266, Percent_Identity=24.4360902255639, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17534361, Length=436, Percent_Identity=32.5688073394495, Blast_Score=236, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI71992373, Length=453, Percent_Identity=30.9050772626932, Blast_Score=158, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI71992381, Length=452, Percent_Identity=29.8672566371681, Blast_Score=148, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI71992392, Length=405, Percent_Identity=29.6296296296296, Blast_Score=130, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6320023, Length=440, Percent_Identity=37.0454545454545, Blast_Score=297, Evalue=2e-81,
Organism=Saccharomyces cerevisiae, GI6320764, Length=452, Percent_Identity=35.1769911504425, Blast_Score=277, Evalue=3e-75,
Organism=Saccharomyces cerevisiae, GI6320027, Length=431, Percent_Identity=29.0023201856148, Blast_Score=157, Evalue=3e-39,
Organism=Drosophila melanogaster, GI18921117, Length=438, Percent_Identity=36.3013698630137, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24639277, Length=438, Percent_Identity=36.3013698630137, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24639275, Length=438, Percent_Identity=36.3013698630137, Blast_Score=273, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50737; Mature: 50606

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHAPHPVLLDAARLAALLERIAARIGPARVVTDAAELAPWLVEGRGLFQGATPAMVEP
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ATTDEVSFIVAACAEAGVPVVPQGGNTGLVGGQVPFGGLLLSLRRMSRIRDLDPIDLTVV
CCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE
AEAGCTLHQVQQAAAETGCLFPLSIASEGSCRIGGNLSTNAGGTAVLRYGNMRELTFGLE
ECCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEEE
VVLPDGRIWNGLSRLRKDNTGYALKDLFIGAEGTLGIITAAVLRLYPAPRAHATTLTGLA
EEECCCHHHHHHHHHHCCCCCCEEHHEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHCCC
SPEAALKLFQRLRNVAGDALTGFEILPRFGMETVLTHIPGTTRALAGDHGWYALAELTST
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHCCCCCHHHCCCCCHHHHHHHHHC
RRDDDLSALALEVFGEAFEAGEIEDAVIAASEAQAEALWKLREALSDAQKFEGGSIKHDV
CCCCHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
SVPVSRVPHFIAEAARACEAHMPGVRVCAFGHMGDGNIHFNLSQPVGMDKAAYLACWEGF
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHH
NRIVHDIVAGLGGSISAEHGIGLLKREELPLYKDPVALELMAAIKAAIDPKGLANPGKVL
HHHHHHHHHCCCCCCCHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PGG
CCC
>Mature Secondary Structure 
SSHAPHPVLLDAARLAALLERIAARIGPARVVTDAAELAPWLVEGRGLFQGATPAMVEP
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ATTDEVSFIVAACAEAGVPVVPQGGNTGLVGGQVPFGGLLLSLRRMSRIRDLDPIDLTVV
CCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE
AEAGCTLHQVQQAAAETGCLFPLSIASEGSCRIGGNLSTNAGGTAVLRYGNMRELTFGLE
ECCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEEE
VVLPDGRIWNGLSRLRKDNTGYALKDLFIGAEGTLGIITAAVLRLYPAPRAHATTLTGLA
EEECCCHHHHHHHHHHCCCCCCEEHHEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHCCC
SPEAALKLFQRLRNVAGDALTGFEILPRFGMETVLTHIPGTTRALAGDHGWYALAELTST
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHCCCCCHHHCCCCCHHHHHHHHHC
RRDDDLSALALEVFGEAFEAGEIEDAVIAASEAQAEALWKLREALSDAQKFEGGSIKHDV
CCCCHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
SVPVSRVPHFIAEAARACEAHMPGVRVCAFGHMGDGNIHFNLSQPVGMDKAAYLACWEGF
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHH
NRIVHDIVAGLGGSISAEHGIGLLKREELPLYKDPVALELMAAIKAAIDPKGLANPGKVL
HHHHHHHHHCCCCCCCHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PGG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]