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The map label for this gene is yedQ [H]

Identifier: 154246349

GI number: 154246349

Start: 2686898

End: 2688181

Strand: Direct

Name: yedQ [H]

Synonym: Xaut_2408

Alternate gene names: 154246349

Gene position: 2686898-2688181 (Clockwise)

Preceding gene: 154246348

Following gene: 154246350

Centisome position: 50.61

GC content: 68.46

Gene sequence:

>1284_bases
ATGCGACGGCCCTGGCGCAAAGGGGGCGTCCCGCGTGCGGGCGCTCGAAGGCAAAGAATGTCCGAGGGACGCCTTTATCT
CCTGGCCGGCCCGGCCGTCTCGCTCGTTGTCGCCTGCGTCTTTCTCCTGGTCTGGCTGCACCACCGCAAGCGGTCCTACG
TGCCGTTCTTCGCCGTGGCGTTCTGCGCCTATGCCATGGCCGCGCTGTCGCAGCTGTTCCAGATCCCGGCAGGTGTCGGG
CTCAATACCATGGTCTCGGGCCTGGTCTACACGTTCGGCATCTTCTGCCTTGTGCAAGGAGTGCTGGCGCGGTTCGGCAA
GGCAGGCGCCGCCCCGGTGCTGGCGGCCGTCTCCGTGGCGATCCTCGGGCTGCTGTACTACTTCATGTATGTGGACCGGA
GCCTCGTGGCCCGGATCTACGTGCAGAATTTCGGCTACGGCGTGATGTTCCTGTTTGCCGCGGTCGAGATCTTCGGGGCC
AGTGGCCGGCGGAAGGTGGACCGGATCCTGTTCTGGGTTTTCCTGCTGTTCGGCCTCCATTTCTTCGTGCGCACCGTGCT
CACCCTGTCCATCTCGCCCGACCTGTTCGCGCTCGATCGGATGCGTACCGAGGGCGCCGATGCGCGGACCATCGGCCTGC
TGTTCCGCCGCTCGCCGTTCTGGCAGGTGCTTAACTTCTCGCTTCTGGTTAGCGGCCTGCTGGTGGCGCTCGCCCTGCTT
GGCGCCATCGCCGTCGATGCCATGGACGAGCTGGAGCGGCAGGGCCGCATCGACCCCCTGACCGGGCTCGCCAACCGCCG
CGGCTTCGACGATCTCGCCCAGGAGCTCATCGCCGACAAGACGAGCCATCCCCAGAGCCTGGTCTATTTCGACATCGACC
GCTTCAAGGGCATCAACGACGGTTTCGGCCATGCGACCGGGGACCTGGTGCTTGCCACCGTCGGCGGCCTCGTCGCCCGC
GTGGTGATGCCGCGAGACGTGGCGGCCCGCCGCGGCGGCGAGGAGTTCGTGGTGCTGCTGGCCAGCACCAGCGCCCGCAG
CGCGTTCCACTTCGCCGAGCGGATGCGCGCCGAGCTGCGGCGCACCTCGTTCCCCATGCTGCCGCCGGGCGCCGTCGTCA
CCGCGAGCTTCGGCGTCGCCGAGCGCAGGCCCGACGAGGACCTGGCGGACCTGCTCCACCGCGCCGACCAGCTGGTCTAT
GCCGCCAAGCACGCCGGCCGGGATCTTGTCCTCACCGACGACGGCGTGCTGGCGGTGCCGGTGGTGGGGCAGGGCGCCGG
TTGA

Upstream 100 bases:

>100_bases
GATTGCATGGCAAGATGATCGGCCTGTAAGCCAAGCCTTGACTTTGCCGTTGCGGCACATTGAAGTTGCGGTGTGGCCGG
TTGCAATGCAGGGGCGTGCG

Downstream 100 bases:

>100_bases
TCCAGATCAACGTCGCGCGCGGAGCAGGTGCCTAGCCTTCCAAAAAACATCGGGAGGCCCAAGGGCCCCCAAGGGGAGGC
CAAGGACATGCCTGCGCAAG

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MRRPWRKGGVPRAGARRQRMSEGRLYLLAGPAVSLVVACVFLLVWLHHRKRSYVPFFAVAFCAYAMAALSQLFQIPAGVG
LNTMVSGLVYTFGIFCLVQGVLARFGKAGAAPVLAAVSVAILGLLYYFMYVDRSLVARIYVQNFGYGVMFLFAAVEIFGA
SGRRKVDRILFWVFLLFGLHFFVRTVLTLSISPDLFALDRMRTEGADARTIGLLFRRSPFWQVLNFSLLVSGLLVALALL
GAIAVDAMDELERQGRIDPLTGLANRRGFDDLAQELIADKTSHPQSLVYFDIDRFKGINDGFGHATGDLVLATVGGLVAR
VVMPRDVAARRGGEEFVVLLASTSARSAFHFAERMRAELRRTSFPMLPPGAVVTASFGVAERRPDEDLADLLHRADQLVY
AAKHAGRDLVLTDDGVLAVPVVGQGAG

Sequences:

>Translated_427_residues
MRRPWRKGGVPRAGARRQRMSEGRLYLLAGPAVSLVVACVFLLVWLHHRKRSYVPFFAVAFCAYAMAALSQLFQIPAGVG
LNTMVSGLVYTFGIFCLVQGVLARFGKAGAAPVLAAVSVAILGLLYYFMYVDRSLVARIYVQNFGYGVMFLFAAVEIFGA
SGRRKVDRILFWVFLLFGLHFFVRTVLTLSISPDLFALDRMRTEGADARTIGLLFRRSPFWQVLNFSLLVSGLLVALALL
GAIAVDAMDELERQGRIDPLTGLANRRGFDDLAQELIADKTSHPQSLVYFDIDRFKGINDGFGHATGDLVLATVGGLVAR
VVMPRDVAARRGGEEFVVLLASTSARSAFHFAERMRAELRRTSFPMLPPGAVVTASFGVAERRPDEDLADLLHRADQLVY
AAKHAGRDLVLTDDGVLAVPVVGQGAG
>Mature_427_residues
MRRPWRKGGVPRAGARRQRMSEGRLYLLAGPAVSLVVACVFLLVWLHHRKRSYVPFFAVAFCAYAMAALSQLFQIPAGVG
LNTMVSGLVYTFGIFCLVQGVLARFGKAGAAPVLAAVSVAILGLLYYFMYVDRSLVARIYVQNFGYGVMFLFAAVEIFGA
SGRRKVDRILFWVFLLFGLHFFVRTVLTLSISPDLFALDRMRTEGADARTIGLLFRRSPFWQVLNFSLLVSGLLVALALL
GAIAVDAMDELERQGRIDPLTGLANRRGFDDLAQELIADKTSHPQSLVYFDIDRFKGINDGFGHATGDLVLATVGGLVAR
VVMPRDVAARRGGEEFVVLLASTSARSAFHFAERMRAELRRTSFPMLPPGAVVTASFGVAERRPDEDLADLLHRADQLVY
AAKHAGRDLVLTDDGVLAVPVVGQGAG

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=201, Percent_Identity=34.3283582089552, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI87081881, Length=165, Percent_Identity=36.3636363636364, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1787262, Length=164, Percent_Identity=37.1951219512195, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI145693134, Length=157, Percent_Identity=33.7579617834395, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787802, Length=179, Percent_Identity=29.0502793296089, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788381, Length=153, Percent_Identity=34.640522875817, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1787816, Length=188, Percent_Identity=29.2553191489362, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1787541, Length=171, Percent_Identity=32.1637426900585, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786584, Length=154, Percent_Identity=32.4675324675325, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87081977, Length=157, Percent_Identity=34.3949044585987, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081974, Length=201, Percent_Identity=26.865671641791, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788956, Length=163, Percent_Identity=35.5828220858896, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788085, Length=174, Percent_Identity=28.1609195402299, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 46703; Mature: 46703

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCCCCC
>Mature Secondary Structure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ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]