Click here to switch to the map view.

The map label for this gene is ycgN [C]

Identifier: 154246350

GI number: 154246350

Start: 2688503

End: 2689123

Strand: Direct

Name: ycgN [C]

Synonym: Xaut_2409

Alternate gene names: 154246350

Gene position: 2688503-2689123 (Clockwise)

Preceding gene: 154246349

Following gene: 154246353

Centisome position: 50.64

GC content: 70.37

Gene sequence:

>621_bases
ATGAGCAGCCCCGAAAAGAGCAGCCCCGAAGACGCCCCTCGGGACGACATCGCCCCGGACGCCCCGGCGCCCGATGGGGC
CAGTGTCCCGTTCTGGCGGGCGAAGCCGTTGTCGGCCATGAGCACCACCGAGTGGGAGAGCCTGTGCGACGGCTGCGGGC
GCTGCTGCCTCGTGAAGCTCGAGGACGAGGACACCGGGCAGGTCGCCTATACGGATGTCGCCTGCCGCCTGCTGGATGCC
GCCACCTGTCGCTGCTCCGACTATGAGCGGCGTTCCGAGATCGTCTCCGACTGTGTGCGCCTGACCCCTGAGAGCGTCGC
GGAGCTGAACTGGCTGCCGCCCACCTGCGCCTACCGGCTGGTGGGCGAGGGCAAGGACCTGCCGTTCTGGCATCCGCTGG
TGTCGGGCGATGCGGGAAGCGTCGCGGCGGCAGGCATCACGGTCTCGGGCAAGGTGGCCGGCAGCGAGAACGAGTTCGGC
CTGTTCGAGCTGGTGGACCACATCGTCGCCTGGCCGGTGCGCTGGCCTCGGGGTGCAAAAGGCGCGGCCAAGCCGAGCCC
GAAGGGCACGCCCGGCGCAAGCCGCCGGCGTCGTCCGAAGGCCGGTGAGCAGAAAGCCTGA

Upstream 100 bases:

>100_bases
CGCACGGCCGCGGGCAAGGCGCACCGAGGCGCACCGACCTGACGCGCACCGCCGCGCGCGGGAGCGGACGCGGCGGGTCC
GGTGTGCTAGAGGGGCGGCC

Downstream 100 bases:

>100_bases
CAGGCCTATTCGGCGGCGGTGGAGCGCTTCTTGCGGGTCTCCACCGGAGCCGGCTCGATCAGGGTGCGGCACTCCTCGGC
GGTGAGGGGCTCGCCGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSSPEKSSPEDAPRDDIAPDAPAPDGASVPFWRAKPLSAMSTTEWESLCDGCGRCCLVKLEDEDTGQVAYTDVACRLLDA
ATCRCSDYERRSEIVSDCVRLTPESVAELNWLPPTCAYRLVGEGKDLPFWHPLVSGDAGSVAAAGITVSGKVAGSENEFG
LFELVDHIVAWPVRWPRGAKGAAKPSPKGTPGASRRRRPKAGEQKA

Sequences:

>Translated_206_residues
MSSPEKSSPEDAPRDDIAPDAPAPDGASVPFWRAKPLSAMSTTEWESLCDGCGRCCLVKLEDEDTGQVAYTDVACRLLDA
ATCRCSDYERRSEIVSDCVRLTPESVAELNWLPPTCAYRLVGEGKDLPFWHPLVSGDAGSVAAAGITVSGKVAGSENEFG
LFELVDHIVAWPVRWPRGAKGAAKPSPKGTPGASRRRRPKAGEQKA
>Mature_205_residues
SSPEKSSPEDAPRDDIAPDAPAPDGASVPFWRAKPLSAMSTTEWESLCDGCGRCCLVKLEDEDTGQVAYTDVACRLLDAA
TCRCSDYERRSEIVSDCVRLTPESVAELNWLPPTCAYRLVGEGKDLPFWHPLVSGDAGSVAAAGITVSGKVAGSENEFGL
FELVDHIVAWPVRWPRGAKGAAKPSPKGTPGASRRRRPKAGEQKA

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=146, Percent_Identity=51.3698630136986, Blast_Score=160, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 22044; Mature: 21913

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPEKSSPEDAPRDDIAPDAPAPDGASVPFWRAKPLSAMSTTEWESLCDGCGRCCLVKL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
EDEDTGQVAYTDVACRLLDAATCRCSDYERRSEIVSDCVRLTPESVAELNWLPPTCAYRL
CCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHH
VGEGKDLPFWHPLVSGDAGSVAAAGITVSGKVAGSENEFGLFELVDHIVAWPVRWPRGAK
HCCCCCCCEECHHHCCCCCCEEEECEEEECEECCCCCCCCHHHHHHHHHHCCCCCCCCCC
GAAKPSPKGTPGASRRRRPKAGEQKA
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSPEKSSPEDAPRDDIAPDAPAPDGASVPFWRAKPLSAMSTTEWESLCDGCGRCCLVKL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
EDEDTGQVAYTDVACRLLDAATCRCSDYERRSEIVSDCVRLTPESVAELNWLPPTCAYRL
CCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHH
VGEGKDLPFWHPLVSGDAGSVAAAGITVSGKVAGSENEFGLFELVDHIVAWPVRWPRGAK
HCCCCCCCEECHHHCCCCCCEEEECEEEECEECCCCCCCCHHHHHHHHHHCCCCCCCCCC
GAAKPSPKGTPGASRRRRPKAGEQKA
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA