Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is yrbH [C]
Identifier: 154246304
GI number: 154246304
Start: 2637375
End: 2637806
Strand: Direct
Name: yrbH [C]
Synonym: Xaut_2362
Alternate gene names: 154246304
Gene position: 2637375-2637806 (Clockwise)
Preceding gene: 154246303
Following gene: 154246306
Centisome position: 49.68
GC content: 67.82
Gene sequence:
>432_bases ATGACCGTGAGCGTCATCCTCAGCCGCAAGGGCAACGACATCTGCACCATCGGGCCGGATGCGACCGTGGGCGATGCCGT GGCGCGCCTTGCCGGGCGCCGCATCGGCGCCATCGTCGTGGTTGACGACGCCATGAGCGTGGAAGGCATCATCTCCGAGC GCGACGTGGTGCGCCTGATCGGGGAGCAGGGGGTCAACGTGCTCGCCGAGCCGCTGTCGAGCGTGATGACGCGCGCGGTG GTGACCTGCACGCCCGACGAGACCGTTCCCGTGATCATGGAGCGCATGACGCGCGGCCGCTTCCGCCACGTGCCCGTGGT GTCGGGCGACAAGCTGGTGGGCATCATCTCCATCGGCGATGTGGTGAAGTTCCGCGTGGAGGAGATGGAGCGCGAGAGCG CCCAGCTGCGCGACTACATCATGTCGGCCTGA
Upstream 100 bases:
>100_bases GCGCATTGCGAGGGATCATCGCTCTTCCAAACCATGCCGCCAGAGAAGACCGGCCAATGCGAAGCCGGTCCCTGGAATGA CGAGAAGGGAGCCAACGCCT
Downstream 100 bases:
>100_bases TCAGGCCGGCTGAACCCAAAGCCTGAAACGAAACCGGCCGGCATGAGCCGGCCGGGACGCATGCGGCGGGATGTGTCCCG CCGCATATGGCTCGTGGGCG
Product: signal-transduction protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; Signal Transduction Protein With CBS Domains; CBS Domain Protein; CBS Domain Containing Protein; Signal Transduction Protein; Signal-Transduction Protein With CBS Domains; CBS Domain Containing Membrane Protein; Signal Transduction Protein With Cbs Domains; Inosine-5-Monophosphate Dehydrogenase; IMP Dehydrogenase; CBS Domain Signal-Transduction Protein; CBS Domain-Containing Signal Transduction Protein; Transcriptional Regulator; XRE Family Transcriptional Regulator; Signal-Transduction Protein With CBS; CBS Domain Pair Family; CBS Domains; CBS Domain Pair Family Protein; Cystathionine-Beta-Synthase; Inosine-5`-Monophosphate Dehydrogenase Protein; Inosine-5prime-Monophosphate Dehydrogenase Protein; Signal-Transduction Protein With Cbs Domains
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTVSVILSRKGNDICTIGPDATVGDAVARLAGRRIGAIVVVDDAMSVEGIISERDVVRLIGEQGVNVLAEPLSSVMTRAV VTCTPDETVPVIMERMTRGRFRHVPVVSGDKLVGIISIGDVVKFRVEEMERESAQLRDYIMSA
Sequences:
>Translated_143_residues MTVSVILSRKGNDICTIGPDATVGDAVARLAGRRIGAIVVVDDAMSVEGIISERDVVRLIGEQGVNVLAEPLSSVMTRAV VTCTPDETVPVIMERMTRGRFRHVPVVSGDKLVGIISIGDVVKFRVEEMERESAQLRDYIMSA >Mature_142_residues TVSVILSRKGNDICTIGPDATVGDAVARLAGRRIGAIVVVDDAMSVEGIISERDVVRLIGEQGVNVLAEPLSSVMTRAVV TCTPDETVPVIMERMTRGRFRHVPVVSGDKLVGIISIGDVVKFRVEEMERESAQLRDYIMSA
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15438; Mature: 15307
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSVILSRKGNDICTIGPDATVGDAVARLAGRRIGAIVVVDDAMSVEGIISERDVVRLI CEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHCHHHHHHHH GEQGVNVLAEPLSSVMTRAVVTCTPDETVPVIMERMTRGRFRHVPVVSGDKLVGIISIGD HHCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCEECCCEECCCCEEEEEEHHH VVKFRVEEMERESAQLRDYIMSA HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVSVILSRKGNDICTIGPDATVGDAVARLAGRRIGAIVVVDDAMSVEGIISERDVVRLI EEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHCHHHHHHHH GEQGVNVLAEPLSSVMTRAVVTCTPDETVPVIMERMTRGRFRHVPVVSGDKLVGIISIGD HHCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCEECCCEECCCCEEEEEEHHH VVKFRVEEMERESAQLRDYIMSA HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA