Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is cbh [H]
Identifier: 154246306
GI number: 154246306
Start: 2638832
End: 2639938
Strand: Direct
Name: cbh [H]
Synonym: Xaut_2364
Alternate gene names: 154246306
Gene position: 2638832-2639938 (Clockwise)
Preceding gene: 154246304
Following gene: 154246309
Centisome position: 49.71
GC content: 67.21
Gene sequence:
>1107_bases TTGAAACGCATCCTGGCAGCTGCGCTTGCAGCATTCCTTCCCATCCAGAACGCCGGGCTGGCCGTGGCCTGCACGGCGGT GAACGTGGTCGCGGCCGACAAGACCGTGATCGCCGGCCGCACCATGGAATGGGCATTCGACATGAAATGGACGCTCAAGA GCATCCCCAAGGGCACGTCGCTGACGCTGACCGCCCCGACCGACCTCGGCCTGCCTGAGAAGACGGTGGCGACCCTCTAT TCCGTCGTGGGCATCAGTGCCGAGGTCATTCCCGGCGGCGCCATCGTCGAGGGGCAGAACGCGGCCGGCCTCGGCATGAG CGGCAATTTCCTGCCCGGATTCACCACCTACCAGACGGTCACCAAGGCGGACACGTCCTACGTCTCCATCCTCGGCTTCG GCGCCTGGGCGCTCGGGATGAACGGCTCGGTGGCCGAGGTGCGCGCCGCTTTGGCGAAGATCAAGGTCTGGGCCGATGCC TCGCTGCCGAGCGGGCCGACGCCGCCCACCCTCCACATGGTCTTCACTGACCGCTCGGGCGCCAGCATTGTCGTGGAATA TGTCGGCGGAGAACTGCAGATCCACGACAATGTGGCGAGCGTCCTCACCAACTCGCCGCCCTACGACTGGCACCTCCTGA ACCTGCGCAACTATCTCAACCTCTCCACCATGGGCGTCGGCGACCGCCGGTTCGGGACGGCCAACGTCACCGCCATCGGC CAGGGCGGCGGCGCCACCGGGCTGCCGGGCGACTTCACCCCGCCCTCGCGCTTCGTGCGGGCGGCCTTCATGCGCCATTC CATGGCCCAGCCGAAGGACGCCGCCACCGCCACCGCCGCCATCGGCCACGTCCTGAACACCGTGGATATTCCGCTGGGCG TCGCCCAGAGCAAGGACGGCGACACGGTCGTCTCGGACTACACCCAGTGGGTGGCCATCAAGGATCTCACCCACAACCGG ATGATGATCTCGGACTATGCCCACCGGGCGACCTTCCTGACCCTCGATCTCGATGCGATCTTCGCCCAGGACAAGCCGAG TGCGCGGCTGGTCACGGACCTGCCGTTTCCGGCCGCGGTGGACGGGACGGCCGCGCTCCGGAACTGA
Upstream 100 bases:
>100_bases CGCTCAATGCGGGTTCATCGGAAATCAGGCATTCCAGCGTCACGTTCAGGCGCAGGCGGCGAGACTAAAACAATCAGAAC ACAAGATGGAGGACGCTTCC
Downstream 100 bases:
>100_bases ACCGGCGGGCCGGCGCGCAGCCCCTCAGGCCGCCGGCCCCTCGGCCTCTCAGACCAGGGCGTGGCGCGCCACCTGCTCGC CCACCTCGAACACCCGCTTG
Product: choloylglycine hydrolase
Products: NA
Alternate protein names: Bile salt hydrolase; Conjugated bile acid hydrolase; CBAH [H]
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKRILAAALAAFLPIQNAGLAVACTAVNVVAADKTVIAGRTMEWAFDMKWTLKSIPKGTSLTLTAPTDLGLPEKTVATLY SVVGISAEVIPGGAIVEGQNAAGLGMSGNFLPGFTTYQTVTKADTSYVSILGFGAWALGMNGSVAEVRAALAKIKVWADA SLPSGPTPPTLHMVFTDRSGASIVVEYVGGELQIHDNVASVLTNSPPYDWHLLNLRNYLNLSTMGVGDRRFGTANVTAIG QGGGATGLPGDFTPPSRFVRAAFMRHSMAQPKDAATATAAIGHVLNTVDIPLGVAQSKDGDTVVSDYTQWVAIKDLTHNR MMISDYAHRATFLTLDLDAIFAQDKPSARLVTDLPFPAAVDGTAALRN
Sequences:
>Translated_368_residues MKRILAAALAAFLPIQNAGLAVACTAVNVVAADKTVIAGRTMEWAFDMKWTLKSIPKGTSLTLTAPTDLGLPEKTVATLY SVVGISAEVIPGGAIVEGQNAAGLGMSGNFLPGFTTYQTVTKADTSYVSILGFGAWALGMNGSVAEVRAALAKIKVWADA SLPSGPTPPTLHMVFTDRSGASIVVEYVGGELQIHDNVASVLTNSPPYDWHLLNLRNYLNLSTMGVGDRRFGTANVTAIG QGGGATGLPGDFTPPSRFVRAAFMRHSMAQPKDAATATAAIGHVLNTVDIPLGVAQSKDGDTVVSDYTQWVAIKDLTHNR MMISDYAHRATFLTLDLDAIFAQDKPSARLVTDLPFPAAVDGTAALRN >Mature_368_residues MKRILAAALAAFLPIQNAGLAVACTAVNVVAADKTVIAGRTMEWAFDMKWTLKSIPKGTSLTLTAPTDLGLPEKTVATLY SVVGISAEVIPGGAIVEGQNAAGLGMSGNFLPGFTTYQTVTKADTSYVSILGFGAWALGMNGSVAEVRAALAKIKVWADA SLPSGPTPPTLHMVFTDRSGASIVVEYVGGELQIHDNVASVLTNSPPYDWHLLNLRNYLNLSTMGVGDRRFGTANVTAIG QGGGATGLPGDFTPPSRFVRAAFMRHSMAQPKDAATATAAIGHVLNTVDIPLGVAQSKDGDTVVSDYTQWVAIKDLTHNR MMISDYAHRATFLTLDLDAIFAQDKPSARLVTDLPFPAAVDGTAALRN
Specific function: The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.24 [H]
Molecular weight: Translated: 38631; Mature: 38631
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILAAALAAFLPIQNAGLAVACTAVNVVAADKTVIAGRTMEWAFDMKWTLKSIPKGTS CHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEECCEEEEEEECEEHHHHCCCCCE LTLTAPTDLGLPEKTVATLYSVVGISAEVIPGGAIVEGQNAAGLGMSGNFLPGFTTYQTV EEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHH TKADTSYVSILGFGAWALGMNGSVAEVRAALAKIKVWADASLPSGPTPPTLHMVFTDRSG HHCCCCEEEEEECCEEEECCCCCHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEEECCCC ASIVVEYVGGELQIHDNVASVLTNSPPYDWHLLNLRNYLNLSTMGVGDRRFGTANVTAIG CEEEEEECCCEEEECCCHHHHHCCCCCCCEEEEEHHHHCCEEEECCCCCCCCCCEEEEEE QGGGATGLPGDFTPPSRFVRAAFMRHSMAQPKDAATATAAIGHVLNTVDIPLGVAQSKDG CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC DTVVSDYTQWVAIKDLTHNRMMISDYAHRATFLTLDLDAIFAQDKPSARLVTDLPFPAAV CEEHHHHHHEEEEEECCCCEEEEECCCCCEEEEEEEHHHEECCCCCCCEEEEECCCCCCC DGTAALRN CCHHHCCC >Mature Secondary Structure MKRILAAALAAFLPIQNAGLAVACTAVNVVAADKTVIAGRTMEWAFDMKWTLKSIPKGTS CHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEECCEEEEEEECEEHHHHCCCCCE LTLTAPTDLGLPEKTVATLYSVVGISAEVIPGGAIVEGQNAAGLGMSGNFLPGFTTYQTV EEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHH TKADTSYVSILGFGAWALGMNGSVAEVRAALAKIKVWADASLPSGPTPPTLHMVFTDRSG HHCCCCEEEEEECCEEEECCCCCHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEEECCCC ASIVVEYVGGELQIHDNVASVLTNSPPYDWHLLNLRNYLNLSTMGVGDRRFGTANVTAIG CEEEEEECCCEEEECCCHHHHHCCCCCCCEEEEEHHHHCCEEEECCCCCCCCCCEEEEEE QGGGATGLPGDFTPPSRFVRAAFMRHSMAQPKDAATATAAIGHVLNTVDIPLGVAQSKDG CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC DTVVSDYTQWVAIKDLTHNRMMISDYAHRATFLTLDLDAIFAQDKPSARLVTDLPFPAAV CEEHHHHHHEEEEEECCCCEEEEECCCCCEEEEEEEHHHEECCCCCCCEEEEECCCCCCC DGTAALRN CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7618863; 11792842 [H]