Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is thrB
Identifier: 154246298
GI number: 154246298
Start: 2629775
End: 2630740
Strand: Direct
Name: thrB
Synonym: Xaut_2356
Alternate gene names: 154246298
Gene position: 2629775-2630740 (Clockwise)
Preceding gene: 154246297
Following gene: 154246299
Centisome position: 49.53
GC content: 68.53
Gene sequence:
>966_bases GTGGCGGTCTATACGGACGTTGCGCCGGCGGAGCTTGAGGCTTTCCTGTCCGGCTACGACATCGGCACGCTCACCTCTTT CCACGGCATCGCGGAAGGGGTGGAGAACTCCAACTTCCTGGTTCAGACCACGCGCGGCAGCTACATCCTCACCCTCTATG AGAAGCGGGTGAACCGGGACGATTTGCCCTTCTTCATCGGCCTCATGGAGCATCTGGCGGCGCGTGGCCTGTCGTGCCCG CAGCCGGTGGCGCAGCGCTCGGGGGCGGTGCTGTCGGAGATCGCGGGGCGGCCGGCGGCCATGGTCACCTTCCTGCCCGG CGTCTCGGTGCGGCGGCCCACGGCCGAGCATTGCGCCGAGCTGGGGCGGGGCCTCGCCCAGCTGCATCTGGCCGGCGCTG ACTTCGCCATGAGGCGGGCCAACAACCTCTCCGTCGCCGGCTGGCGGCCTTTGTTCGTGGCGGCGGACGGGCAGGCCGAC GACGTGGCGCCGGGCCTTGCCGATGCCATCGCGGCGGAGCTGGCAACGCTGGAGGCGAACTGGCCGCAGGGTCTGCCGGC GGGCGTCATTCATGCCGACCTGTTCCCGGACAACGCCTTCTTCCTCGATGAAAAGCTCTCGGGCATCATCGACTTCTACT TCGCCTGCACCGACTTCCTCGCCTATGACGTGGCGGTGTGCCTCAACGCCTGGTGCTTCGAGCCGGACGGCTCCTACAAC GTCACCAAGGGGCGGGCGCTGCTGTCGGGCTATGAAGCGGTGCGGCCCCTGTCGGGGGCCGAGAAGGCAGCCCTGCCGCG CCTTGCCCGGGGCGCTGCCCTGCGCTTCCTGCTCACCCGCCTCGTGGACTGGCTGAACGTGCCCGAGGGCGCTTTGGTGC GCCCCAAGGACCCGCTGGAATATCTGAAGAAGCTGCGCTTCCACCAGGCGGTGGACAGCGCGCAGGATTACGGTCTGGCG GCATGA
Upstream 100 bases:
>100_bases CGAACGCTTCACCGTGACGGTCGAGACTGTGACCTCAACGGAGGAGGACGTGTTCTTCCCCCTGCCGCGCGCCCTGCGGC CGGATGCGGCGGAGTAGAAC
Downstream 100 bases:
>100_bases AAGAAGTGGCGGTGTTCACGGACGGGGCCTGCTCGGGCAATCCCGGCCCCGGCGGCTGGGGCGCGATCCTGCGCTTCGGC GCCCACGAGAAGGAGCTGAG
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MAVYTDVAPAELEAFLSGYDIGTLTSFHGIAEGVENSNFLVQTTRGSYILTLYEKRVNRDDLPFFIGLMEHLAARGLSCP QPVAQRSGAVLSEIAGRPAAMVTFLPGVSVRRPTAEHCAELGRGLAQLHLAGADFAMRRANNLSVAGWRPLFVAADGQAD DVAPGLADAIAAELATLEANWPQGLPAGVIHADLFPDNAFFLDEKLSGIIDFYFACTDFLAYDVAVCLNAWCFEPDGSYN VTKGRALLSGYEAVRPLSGAEKAALPRLARGAALRFLLTRLVDWLNVPEGALVRPKDPLEYLKKLRFHQAVDSAQDYGLA A
Sequences:
>Translated_321_residues MAVYTDVAPAELEAFLSGYDIGTLTSFHGIAEGVENSNFLVQTTRGSYILTLYEKRVNRDDLPFFIGLMEHLAARGLSCP QPVAQRSGAVLSEIAGRPAAMVTFLPGVSVRRPTAEHCAELGRGLAQLHLAGADFAMRRANNLSVAGWRPLFVAADGQAD DVAPGLADAIAAELATLEANWPQGLPAGVIHADLFPDNAFFLDEKLSGIIDFYFACTDFLAYDVAVCLNAWCFEPDGSYN VTKGRALLSGYEAVRPLSGAEKAALPRLARGAALRFLLTRLVDWLNVPEGALVRPKDPLEYLKKLRFHQAVDSAQDYGLA A >Mature_320_residues AVYTDVAPAELEAFLSGYDIGTLTSFHGIAEGVENSNFLVQTTRGSYILTLYEKRVNRDDLPFFIGLMEHLAARGLSCPQ PVAQRSGAVLSEIAGRPAAMVTFLPGVSVRRPTAEHCAELGRGLAQLHLAGADFAMRRANNLSVAGWRPLFVAADGQADD VAPGLADAIAAELATLEANWPQGLPAGVIHADLFPDNAFFLDEKLSGIIDFYFACTDFLAYDVAVCLNAWCFEPDGSYNV TKGRALLSGYEAVRPLSGAEKAALPRLARGAALRFLLTRLVDWLNVPEGALVRPKDPLEYLKKLRFHQAVDSAQDYGLAA
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KHSE_XANP2 (A7IHV6)
Other databases:
- EMBL: CP000781 - RefSeq: YP_001417256.1 - ProteinModelPortal: A7IHV6 - SMR: A7IHV6 - STRING: A7IHV6 - GeneID: 5422658 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_2356 - eggNOG: COG2334 - HOGENOM: HBG309377 - OMA: ADLFRDN - ProtClustDB: PRK05231 - BioCyc: XAUT78245:XAUT_2356-MONOMER - HAMAP: MF_00301 - InterPro: IPR002575 - InterPro: IPR005280 - InterPro: IPR011009 - TIGRFAMs: TIGR00938
Pfam domain/function: PF01636 APH; SSF56112 Kinase_like
EC number: =2.7.1.39
Molecular weight: Translated: 34614; Mature: 34483
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYTDVAPAELEAFLSGYDIGTLTSFHGIAEGVENSNFLVQTTRGSYILTLYEKRVNRD CCEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHCCCC DLPFFIGLMEHLAARGLSCPQPVAQRSGAVLSEIAGRPAAMVTFLPGVSVRRPTAEHCAE CCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHH LGRGLAQLHLAGADFAMRRANNLSVAGWRPLFVAADGQADDVAPGLADAIAAELATLEAN HHHHHHHHHHCCCHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC WPQGLPAGVIHADLFPDNAFFLDEKLSGIIDFYFACTDFLAYDVAVCLNAWCFEPDGSYN CCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC VTKGRALLSGYEAVRPLSGAEKAALPRLARGAALRFLLTRLVDWLNVPEGALVRPKDPLE CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHH YLKKLRFHQAVDSAQDYGLAA HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVYTDVAPAELEAFLSGYDIGTLTSFHGIAEGVENSNFLVQTTRGSYILTLYEKRVNRD CEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHCCCC DLPFFIGLMEHLAARGLSCPQPVAQRSGAVLSEIAGRPAAMVTFLPGVSVRRPTAEHCAE CCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHH LGRGLAQLHLAGADFAMRRANNLSVAGWRPLFVAADGQADDVAPGLADAIAAELATLEAN HHHHHHHHHHCCCHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC WPQGLPAGVIHADLFPDNAFFLDEKLSGIIDFYFACTDFLAYDVAVCLNAWCFEPDGSYN CCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC VTKGRALLSGYEAVRPLSGAEKAALPRLARGAALRFLLTRLVDWLNVPEGALVRPKDPLE CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHH YLKKLRFHQAVDSAQDYGLAA HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA