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The map label for this gene is panD

Identifier: 154246282

GI number: 154246282

Start: 2614925

End: 2615377

Strand: Direct

Name: panD

Synonym: Xaut_2340

Alternate gene names: 154246282

Gene position: 2614925-2615377 (Clockwise)

Preceding gene: 154246279

Following gene: 154246286

Centisome position: 49.26

GC content: 66.89

Gene sequence:

>453_bases
ATGCGTAAGATCGTCGCCGGCAAGCTGCACGGCCTGACCGTGACGGGGGCCGACCTCAACTATCACGGCTCCATCACGCT
TGATCCCGAGCATTGCGAGGAGGCGGGGATCCTGCCGCTGGAATTCGTCGAGATCTGGAACCGCAATTCCGGGGCGCGGA
TCTCCACCTATGTCATCCTCGGCGAGCGCGGCTCGCGCTGCTGCGTGCTCAATGGCGCCGCCGCCCGCACCTGCCAGCCG
GGCGACGAGGTCATCATCTGCAATTCGGTCTACGTGCCGGAAGGCGAGATCGTGGCGCTGCGCCCGCGCGTCCTGACCTT
CGACAAGGATAACCGCGTCACGAGCCGCCTCACCTATGAGGTGACGCGCGACAGCCAGGGCGCCTACCACTTCGCCGTGC
GCGACGAACGCGGCGACGAGAAGCCGATCCCGCTCCGGGTCGAGGCGTCCTGA

Upstream 100 bases:

>100_bases
AGATGGATACCGGTCGCGTCAAGAAAACGCAGCAACACACAAGGCTGGGTCATTTGCTCGGGGCAGTGCGATAACGATCC
GGCGGGGAGGACGGCTGAAC

Downstream 100 bases:

>100_bases
TGTGCGGCGCGGCTGGCGCGCGCGGGATCAGAACTTGTAGTTGATGCCGATCCTGGCGGTCTGCGCGGTCACGCCGGCGC
TGGCGCCGAGGGTGTCGTAG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRKIVAGKLHGLTVTGADLNYHGSITLDPEHCEEAGILPLEFVEIWNRNSGARISTYVILGERGSRCCVLNGAAARTCQP
GDEVIICNSVYVPEGEIVALRPRVLTFDKDNRVTSRLTYEVTRDSQGAYHFAVRDERGDEKPIPLRVEAS

Sequences:

>Translated_150_residues
MRKIVAGKLHGLTVTGADLNYHGSITLDPEHCEEAGILPLEFVEIWNRNSGARISTYVILGERGSRCCVLNGAAARTCQP
GDEVIICNSVYVPEGEIVALRPRVLTFDKDNRVTSRLTYEVTRDSQGAYHFAVRDERGDEKPIPLRVEAS
>Mature_150_residues
MRKIVAGKLHGLTVTGADLNYHGSITLDPEHCEEAGILPLEFVEIWNRNSGARISTYVILGERGSRCCVLNGAAARTCQP
GDEVIICNSVYVPEGEIVALRPRVLTFDKDNRVTSRLTYEVTRDSQGAYHFAVRDERGDEKPIPLRVEAS

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=113, Percent_Identity=46.0176991150442, Blast_Score=101, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_XANP2 (A7IHU0)

Other databases:

- EMBL:   CP000781
- RefSeq:   YP_001417240.1
- ProteinModelPortal:   A7IHU0
- SMR:   A7IHU0
- STRING:   A7IHU0
- GeneID:   5421686
- GenomeReviews:   CP000781_GR
- KEGG:   xau:Xaut_2340
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   DLNYHGS
- ProtClustDB:   PRK05449
- BioCyc:   XAUT78245:XAUT_2340-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 16584; Mature: 16584

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: ACT_SITE 24-24 ACT_SITE 57-57 BINDING 56-56

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIVAGKLHGLTVTGADLNYHGSITLDPEHCEEAGILPLEFVEIWNRNSGARISTYVIL
CCCEECEEECCEEEECCCCCCCCEEEECHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEE
GERGSRCCVLNGAAARTCQPGDEVIICNSVYVPEGEIVALRPRVLTFDKDNRVTSRLTYE
CCCCCEEEEEECCCCCCCCCCCCEEEECEEECCCCCEEEECCEEEEECCCCCEEEEEEEE
VTRDSQGAYHFAVRDERGDEKPIPLRVEAS
EECCCCCEEEEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure
MRKIVAGKLHGLTVTGADLNYHGSITLDPEHCEEAGILPLEFVEIWNRNSGARISTYVIL
CCCEECEEECCEEEECCCCCCCCEEEECHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEE
GERGSRCCVLNGAAARTCQPGDEVIICNSVYVPEGEIVALRPRVLTFDKDNRVTSRLTYE
CCCCCEEEEEECCCCCCCCCCCCEEEECEEECCCCCEEEECCEEEEECCCCCEEEEEEEE
VTRDSQGAYHFAVRDERGDEKPIPLRVEAS
EECCCCCEEEEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA