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The map label for this gene is yisS [H]

Identifier: 154246281

GI number: 154246281

Start: 2613583

End: 2614617

Strand: Reverse

Name: yisS [H]

Synonym: Xaut_2339

Alternate gene names: 154246281

Gene position: 2614617-2613583 (Counterclockwise)

Preceding gene: 154246283

Following gene: 154246280

Centisome position: 49.25

GC content: 70.05

Gene sequence:

>1035_bases
ATGGCTCATACGGCAGCGCCCGGCACGGAGCGCGCCCGGGTTCGTCCGAAGGACGACCAGCCGGTGCGGATCGGCGTCAC
GGGCATCGGCATCATGGGCTCCAACCACGCCCGCGTTCTTTCCCAGCTTCCCGGCGCGGAACTCGTCGCCGTCGCCGATC
CCGACCAGGAGCAGGCGCAGCGCGTCGCCAACTTCCTCGGCTGCCAGGCTGTGGGCGACCATCGCGCCCTGCTCGACCTC
GGCCTTGACGCCGTGGTGGTGGCGGCCCCCACCCACCTGCATCACCCCATCGCCCTCGACGTGATCGCCGCCGGCTGCTC
GGTGCTGGTGGAAAAGCCCGTCGCCTCCACGGTGGAGGAAGGCCGCGAGATCGTCGCCGCCGCCCGCGAGAAGGGCGTGA
CCTTGATGGTCGGCCATGTGGAGCGCTTCAATCCCGCCGTCCGGGCGGTGAAGGAGGCCATCCGCGACGAAAGCCTGCTT
TCCATCGCCATCACCCGGGTGGGGCCGTTCCCGCCGCGCATGTCCAACGTGGGCGTGGTGATCGACCTCGCGGTGCACGA
CATCGACCTCATCCGCTGGTTCACCGGCTCGGATATCCTCGAGGTGCAGCCGCAGACCTCGGCCGCCATCGCCGAGCGCG
AGGATATCGCCCTCCTCCAGTTCCGCACCACCTCGGGCGTGCTCGCCCACATCAACACCAACTGGCTGACGCCGTTCAAG
GCCCGCACGGTGCATGTGGCGACCCGCAAGAAGTACGTGATCGGCGACCTCCTCACCCGCCAGGTGACCGAGCATTTCGA
CTACCGGCCGGACGGTTCCTATTCCACCCGCCACCTGCCGGTGGCCTACGCCGAGCCGCTGCGCGCCGAGCTGGAGAATT
TCCTCTCCGCCGTACGCACCGGCCGCGCGCCGGAAGTGACCGGCGAGGAAGGCGTATCGAGCCTGGAGATCGCCATCTCC
TGCCTGCCCGGCTCGGCGCCCGCCAAGGCCGCGCCGTCCGAGACGGCGGCCGAGAAGCGCCGCGCCCTGGGCTGA

Upstream 100 bases:

>100_bases
TCTTGAACGTGGCGGGATGGGGGAATTGACGCCCCTCCTCGCCTTTTAAACGTTGATCGTGCTAGAGCCCGCACTCGTTG
AATGATGGAAGAGGGCTGAA

Downstream 100 bases:

>100_bases
ACACAGGCCGGCCGGGGTGGCCGTGGCCGCCTACGACTTTGCGCCCACCGCGCGGGCATGCGTCACACCGGGGGCTGTGA
GTTCGGCTCACCTGCCCCGG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MAHTAAPGTERARVRPKDDQPVRIGVTGIGIMGSNHARVLSQLPGAELVAVADPDQEQAQRVANFLGCQAVGDHRALLDL
GLDAVVVAAPTHLHHPIALDVIAAGCSVLVEKPVASTVEEGREIVAAAREKGVTLMVGHVERFNPAVRAVKEAIRDESLL
SIAITRVGPFPPRMSNVGVVIDLAVHDIDLIRWFTGSDILEVQPQTSAAIAEREDIALLQFRTTSGVLAHINTNWLTPFK
ARTVHVATRKKYVIGDLLTRQVTEHFDYRPDGSYSTRHLPVAYAEPLRAELENFLSAVRTGRAPEVTGEEGVSSLEIAIS
CLPGSAPAKAAPSETAAEKRRALG

Sequences:

>Translated_344_residues
MAHTAAPGTERARVRPKDDQPVRIGVTGIGIMGSNHARVLSQLPGAELVAVADPDQEQAQRVANFLGCQAVGDHRALLDL
GLDAVVVAAPTHLHHPIALDVIAAGCSVLVEKPVASTVEEGREIVAAAREKGVTLMVGHVERFNPAVRAVKEAIRDESLL
SIAITRVGPFPPRMSNVGVVIDLAVHDIDLIRWFTGSDILEVQPQTSAAIAEREDIALLQFRTTSGVLAHINTNWLTPFK
ARTVHVATRKKYVIGDLLTRQVTEHFDYRPDGSYSTRHLPVAYAEPLRAELENFLSAVRTGRAPEVTGEEGVSSLEIAIS
CLPGSAPAKAAPSETAAEKRRALG
>Mature_343_residues
AHTAAPGTERARVRPKDDQPVRIGVTGIGIMGSNHARVLSQLPGAELVAVADPDQEQAQRVANFLGCQAVGDHRALLDLG
LDAVVVAAPTHLHHPIALDVIAAGCSVLVEKPVASTVEEGREIVAAAREKGVTLMVGHVERFNPAVRAVKEAIRDESLLS
IAITRVGPFPPRMSNVGVVIDLAVHDIDLIRWFTGSDILEVQPQTSAAIAEREDIALLQFRTTSGVLAHINTNWLTPFKA
RTVHVATRKKYVIGDLLTRQVTEHFDYRPDGSYSTRHLPVAYAEPLRAELENFLSAVRTGRAPEVTGEEGVSSLEIAISC
LPGSAPAKAAPSETAAEKRRALG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=136, Percent_Identity=31.6176470588235, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787574, Length=191, Percent_Identity=29.8429319371728, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081947, Length=181, Percent_Identity=26.5193370165746, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36860; Mature: 36728

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHTAAPGTERARVRPKDDQPVRIGVTGIGIMGSNHARVLSQLPGAELVAVADPDQEQAQ
CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHCCCCEEEEEECCCHHHHH
RVANFLGCQAVGDHRALLDLGLDAVVVAAPTHLHHPIALDVIAAGCSVLVEKPVASTVEE
HHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHH
GREIVAAAREKGVTLMVGHVERFNPAVRAVKEAIRDESLLSIAITRVGPFPPRMSNVGVV
HHHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEE
IDLAVHDIDLIRWFTGSDILEVQPQTSAAIAEREDIALLQFRTTSGVLAHINTNWLTPFK
EEEEECCEEEEEEECCCCEEEECCCCHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCC
ARTVHVATRKKYVIGDLLTRQVTEHFDYRPDGSYSTRHLPVAYAEPLRAELENFLSAVRT
CEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GRAPEVTGEEGVSSLEIAISCLPGSAPAKAAPSETAAEKRRALG
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AHTAAPGTERARVRPKDDQPVRIGVTGIGIMGSNHARVLSQLPGAELVAVADPDQEQAQ
CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHCCCCEEEEEECCCHHHHH
RVANFLGCQAVGDHRALLDLGLDAVVVAAPTHLHHPIALDVIAAGCSVLVEKPVASTVEE
HHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHH
GREIVAAAREKGVTLMVGHVERFNPAVRAVKEAIRDESLLSIAITRVGPFPPRMSNVGVV
HHHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEE
IDLAVHDIDLIRWFTGSDILEVQPQTSAAIAEREDIALLQFRTTSGVLAHINTNWLTPFK
EEEEECCEEEEEEECCCCEEEECCCCHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCC
ARTVHVATRKKYVIGDLLTRQVTEHFDYRPDGSYSTRHLPVAYAEPLRAELENFLSAVRT
CEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GRAPEVTGEEGVSSLEIAISCLPGSAPAKAAPSETAAEKRRALG
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]