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The map label for this gene is dadA

Identifier: 154246246

GI number: 154246246

Start: 2573157

End: 2574422

Strand: Reverse

Name: dadA

Synonym: Xaut_2304

Alternate gene names: 154246246

Gene position: 2574422-2573157 (Counterclockwise)

Preceding gene: 154246250

Following gene: 154246245

Centisome position: 48.49

GC content: 69.12

Gene sequence:

>1266_bases
ATGCGCATTCTGATTCTCGGCAGCGGCGTCGTGGGAACTGCATCGGCCTATTACCTGGCAAAGGCCGGGCACGAGGTGAC
CGTGCTCGACCGCCAGCGGGCGGCGGGCATGGAAACCTCATTTGCCAATGCGGGGCAGGTCTCGCCCGGCTATTCGGCGC
CCTGGGCCGGACCGGGCATCCCGGTGAAGGCCATCAAGTGGCTGCTCATGCACCACCGCCCGCTGGTTGTGTGGCCGAGC
CTCGACCCCAAGCTCTATCTGTGGCTGGCCAAGATGCTGGCCAACTGCACCGAGGAGGCCTACCGCCGCAACAAGGCGCG
CATGGTGGCCCTCGCCGAATACAGCCGCGACGCCCTCGATGCCCTGAGGTCCGAGACCGGCATCGCCTATGACGAGCGCA
TGCTGGGCACGCTCCAGCTGTTCCGCACCCGCAAGCAGCTCGACCATGTGCATTCCGACACCGAGGTGCTGGACGCCCAC
AACGTCCGCTACGAGCTGCTCGACCCCTCGGGCTGCATCCGCGCCGAGCCGGCGCTCGCCCGGGTGCGGGACAAGTTCGT
CGGCGGCTTGCGCTTGCCGGGGGACGAGACCGGCGACGCCCACATCTTCACCCGCAATCTTGCGGACATCTGCGCGCGGC
AGGGCGTCACCTTCCGCTATGGCGTCACCGTGGAAGGGCTGAGGCACGAGGCCGGGCGCATCACCGGCGTGGCGCTGGCG
GGGGGCGAAATCGCCACCGCCGACATCTACGTGGCCGCCATGGGCAGCTATACCCCGGCGCTGCTCGCGCCTTTGGGCAT
CAGGCTGCCGGTCTATCCGGTGAAGGGCTATTCCCTCACCCTGCCCATCACCGACCCGGACGCGGCGCCCCGCTCCACCG
TCATGGACGAGACCTACAAGGTGGCCATCACCCGCCTCGGCGAGCGCATCCGGGTGGGGGGAACGGCGGAGCTCGCCGGC
TTCGACCTCAGCCTCAGGGAGCCGCGCCGGGCCACCCTCGCCCATTCGGTGGGCGACCTGTTCCCCGCCGGCGGCGACAT
CTCAAAAGCCACATTCTGGACCGGGCTGCGCCCCATGACGCCGGACGGCACCCCCATCATCGGCCCGACGAAGCTCGACA
ATCTCTTTACCAATACCGGCCACGGGACGCTGGGCTGGACCATGGCCTGCGGCTCCGGGCGGGTGCTCGCCGACCTGATA
GGCGGACGCGCCCCCGACATCGACACCGCCGACCTCTCGGTCGCCCGTTATGCTGAGGCGGCCTGA

Upstream 100 bases:

>100_bases
TTGCGCCGAGTTCGGCGCTCAATGTCGTTTTGCCGCCTCATGGGGCACCGGCGGGAGCCGGGGTGCCGGCGGGGCGGGCG
GGTCCGGAGGGGTCTTCGCC

Downstream 100 bases:

>100_bases
GGGAAGACGGGGTGGCCTGAGGGCGCCGGGGCGGCGGCGATGACGGCGCAGGAGCCCTTTTGGACCACCAAAAGGGCATG
ACTGCACCCACCCCCGTCAT

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MRILILGSGVVGTASAYYLAKAGHEVTVLDRQRAAGMETSFANAGQVSPGYSAPWAGPGIPVKAIKWLLMHHRPLVVWPS
LDPKLYLWLAKMLANCTEEAYRRNKARMVALAEYSRDALDALRSETGIAYDERMLGTLQLFRTRKQLDHVHSDTEVLDAH
NVRYELLDPSGCIRAEPALARVRDKFVGGLRLPGDETGDAHIFTRNLADICARQGVTFRYGVTVEGLRHEAGRITGVALA
GGEIATADIYVAAMGSYTPALLAPLGIRLPVYPVKGYSLTLPITDPDAAPRSTVMDETYKVAITRLGERIRVGGTAELAG
FDLSLREPRRATLAHSVGDLFPAGGDISKATFWTGLRPMTPDGTPIIGPTKLDNLFTNTGHGTLGWTMACGSGRVLADLI
GGRAPDIDTADLSVARYAEAA

Sequences:

>Translated_421_residues
MRILILGSGVVGTASAYYLAKAGHEVTVLDRQRAAGMETSFANAGQVSPGYSAPWAGPGIPVKAIKWLLMHHRPLVVWPS
LDPKLYLWLAKMLANCTEEAYRRNKARMVALAEYSRDALDALRSETGIAYDERMLGTLQLFRTRKQLDHVHSDTEVLDAH
NVRYELLDPSGCIRAEPALARVRDKFVGGLRLPGDETGDAHIFTRNLADICARQGVTFRYGVTVEGLRHEAGRITGVALA
GGEIATADIYVAAMGSYTPALLAPLGIRLPVYPVKGYSLTLPITDPDAAPRSTVMDETYKVAITRLGERIRVGGTAELAG
FDLSLREPRRATLAHSVGDLFPAGGDISKATFWTGLRPMTPDGTPIIGPTKLDNLFTNTGHGTLGWTMACGSGRVLADLI
GGRAPDIDTADLSVARYAEAA
>Mature_421_residues
MRILILGSGVVGTASAYYLAKAGHEVTVLDRQRAAGMETSFANAGQVSPGYSAPWAGPGIPVKAIKWLLMHHRPLVVWPS
LDPKLYLWLAKMLANCTEEAYRRNKARMVALAEYSRDALDALRSETGIAYDERMLGTLQLFRTRKQLDHVHSDTEVLDAH
NVRYELLDPSGCIRAEPALARVRDKFVGGLRLPGDETGDAHIFTRNLADICARQGVTFRYGVTVEGLRHEAGRITGVALA
GGEIATADIYVAAMGSYTPALLAPLGIRLPVYPVKGYSLTLPITDPDAAPRSTVMDETYKVAITRLGERIRVGGTAELAG
FDLSLREPRRATLAHSVGDLFPAGGDISKATFWTGLRPMTPDGTPIIGPTKLDNLFTNTGHGTLGWTMACGSGRVLADLI
GGRAPDIDTADLSVARYAEAA

Specific function: Oxidative deamination of D-amino acids

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=420, Percent_Identity=57.1428571428571, Blast_Score=479, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA_XANP2 (A7IHQ4)

Other databases:

- EMBL:   CP000781
- RefSeq:   YP_001417204.1
- ProteinModelPortal:   A7IHQ4
- STRING:   A7IHQ4
- GeneID:   5421295
- GenomeReviews:   CP000781_GR
- KEGG:   xau:Xaut_2304
- eggNOG:   COG0665
- HOGENOM:   HBG729204
- OMA:   PITDESQ
- ProtClustDB:   CLSK2328131
- BioCyc:   XAUT78245:XAUT_2304-MONOMER
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 45350; Mature: 45350

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILILGSGVVGTASAYYLAKAGHEVTVLDRQRAAGMETSFANAGQVSPGYSAPWAGPGI
CEEEEEECCCCCCCHHEEEECCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PVKAIKWLLMHHRPLVVWPSLDPKLYLWLAKMLANCTEEAYRRNKARMVALAEYSRDALD
CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHCHHHHH
ALRSETGIAYDERMLGTLQLFRTRKQLDHVHSDTEVLDAHNVRYELLDPSGCIRAEPALA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCCCHHHH
RVRDKFVGGLRLPGDETGDAHIFTRNLADICARQGVTFRYGVTVEGLRHEAGRITGVALA
HHHHHHHCCEECCCCCCCCCEEEEHHHHHHHHHCCCEEEECCEECCHHCCCCCEEEEEEE
GGEIATADIYVAAMGSYTPALLAPLGIRLPVYPVKGYSLTLPITDPDAAPRSTVMDETYK
CCCEEEEEEEEEECCCCCHHHHHCCCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHH
VAITRLGERIRVGGTAELAGFDLSLREPRRATLAHSVGDLFPAGGDISKATFWTGLRPMT
HHHHHCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCC
PDGTPIIGPTKLDNLFTNTGHGTLGWTMACGSGRVLADLIGGRAPDIDTADLSVARYAEA
CCCCEECCCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHCC
A
C
>Mature Secondary Structure
MRILILGSGVVGTASAYYLAKAGHEVTVLDRQRAAGMETSFANAGQVSPGYSAPWAGPGI
CEEEEEECCCCCCCHHEEEECCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PVKAIKWLLMHHRPLVVWPSLDPKLYLWLAKMLANCTEEAYRRNKARMVALAEYSRDALD
CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHCHHHHH
ALRSETGIAYDERMLGTLQLFRTRKQLDHVHSDTEVLDAHNVRYELLDPSGCIRAEPALA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCCCHHHH
RVRDKFVGGLRLPGDETGDAHIFTRNLADICARQGVTFRYGVTVEGLRHEAGRITGVALA
HHHHHHHCCEECCCCCCCCCEEEEHHHHHHHHHCCCEEEECCEECCHHCCCCCEEEEEEE
GGEIATADIYVAAMGSYTPALLAPLGIRLPVYPVKGYSLTLPITDPDAAPRSTVMDETYK
CCCEEEEEEEEEECCCCCHHHHHCCCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHH
VAITRLGERIRVGGTAELAGFDLSLREPRRATLAHSVGDLFPAGGDISKATFWTGLRPMT
HHHHHCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCC
PDGTPIIGPTKLDNLFTNTGHGTLGWTMACGSGRVLADLIGGRAPDIDTADLSVARYAEA
CCCCEECCCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA