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The map label for this gene is ifcA [H]

Identifier: 154246216

GI number: 154246216

Start: 2532941

End: 2534338

Strand: Direct

Name: ifcA [H]

Synonym: Xaut_2274

Alternate gene names: 154246216

Gene position: 2532941-2534338 (Clockwise)

Preceding gene: 154246215

Following gene: 154246217

Centisome position: 47.71

GC content: 67.45

Gene sequence:

>1398_bases
ATGGACGCGACACTCGCGCGCGTGGACGTCGTCGTCATCGGTGGCGGCAACGCCGGGCTTTGCGCTGCCATCTCAGCGCG
ACGCTCCGGCGCTTCCGTCCTGGTCGTGGAGGCGGCCCCGAAATTCTACCGTGGCGGCAACACGCGCCACACCCGCAACA
TGCGCTGTGCCCACGACAGCGCCACGAAGATCCTCTCCGGCCCCTACACGCAGGACGAATTCTTCGAAGACCTCCTGCGG
GTCACCCAGGGCCAGACGGACGAGGTCCTCGCCCGGCTGATGATCCGCGAATCCCAGGACATGCTGGGGTGGATCGTTGA
ACAGGGCGTGCGCTGGCAGCCCTCGCTGGGCGGCACGCTCAGCCTCGGCCGTACCAATTCGTTCTTCCTCGGCGGCGGCC
GGGCCATGCTCAATGCGCTTTATCTCACCGCCGAGCGCCTCGGCGTCGAGGTCCTCTACGACACCGAGGTGGTCGAGATG
GAGATGGAAGGCGGACGCTGCAGCGGCGTCCTCGTCCGTCGCCCGGATGGCATGCATCGCATTTCCGCCAAGGCCGTCGT
CGCCGCCGCCGGCGGCTTCGAGGCCAACATCGACTGGCTGAAGGAGGCCTGGGGCCCCTCCGCCGGTAATTTTCTCATCC
GCGGCACGCCCTACAACCGGGGAACCGTGCTGAAGATGCTGATGGACAAGGGCGTGGAGACGATCCGCGATCCCACCCAG
TGCCATGCGGTCGCCATCGATGCACGGGCCCCGAAGTTCGATGGCGGCATCATCACGCGGCTCGACTGCGTGGTCTTCGG
TATCGTCGTCAACAACCGGGCAGAGCGCTTTTACGACGAGGGCGAGGACATCTGGCCCAAGCGCTACGCCATCTGGGGTC
GCCTCGTGGCCCAGCAGCCCGACCAGATCGCCTACATCCTTTTCGATGCCTCCTCGCTTGAGCTGTTCATGCCCTCCCTG
TACCCGCCCATCGCGGCGCCCACCATCGCCGAGCTGGCGGGCAAGCTCGGCCTCGATGCCGAGGCCCTCACCCGCACCGT
GGAGGGCTTCAACGCCGCCGTTCGACCCGGCACCTTCGACGACAAGACCCTCGATGATTGCCGCACCGAGGGCCTGACGC
CGCCCAAATCCCACTGGGCGCGCAAGCTCCAGACGGCGCCTTACTACGCCTATCCGGTGCGGCCGGGCATCACCTTCACC
TATCTTGGCGTCCGCGTCGGCGCCGATGCGCGCATGCGGATGGCCGACGGGACAGGCGCGGACAATCTGTTCGCCGCCGG
GGAGATCATGGCCGGCAACGTGCTCGGCCGCGGCTATGCCGCGGGCATCGGCATGACCATTGGCAGCGTGTTCGGGCGCA
TCGCAGGACGGGAGGCGGCCGACCATGCACGCCACTGA

Upstream 100 bases:

>100_bases
GCACCGGGCTTCTGGCTCATGGCCGCGGCCGCCTCGGGCCTGATCGCGACCATCCTCATCTATCGCGGACGGGGCGCGGC
CCCCGCGCGGAGTTGACGTG

Downstream 100 bases:

>100_bases
TGCTTTGAAGGAGGCCGACCGCCTGATGACGGTCTGCAACTCCTGCCGCTATTGCGAAGGCCTGTGCGCGGTGTTTCCCG
CCATGGAGATGCGGCGCGCC

Product: tricarballylate dehydrogenase

Products: NA

Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MDATLARVDVVVIGGGNAGLCAAISARRSGASVLVVEAAPKFYRGGNTRHTRNMRCAHDSATKILSGPYTQDEFFEDLLR
VTQGQTDEVLARLMIRESQDMLGWIVEQGVRWQPSLGGTLSLGRTNSFFLGGGRAMLNALYLTAERLGVEVLYDTEVVEM
EMEGGRCSGVLVRRPDGMHRISAKAVVAAAGGFEANIDWLKEAWGPSAGNFLIRGTPYNRGTVLKMLMDKGVETIRDPTQ
CHAVAIDARAPKFDGGIITRLDCVVFGIVVNNRAERFYDEGEDIWPKRYAIWGRLVAQQPDQIAYILFDASSLELFMPSL
YPPIAAPTIAELAGKLGLDAEALTRTVEGFNAAVRPGTFDDKTLDDCRTEGLTPPKSHWARKLQTAPYYAYPVRPGITFT
YLGVRVGADARMRMADGTGADNLFAAGEIMAGNVLGRGYAAGIGMTIGSVFGRIAGREAADHARH

Sequences:

>Translated_465_residues
MDATLARVDVVVIGGGNAGLCAAISARRSGASVLVVEAAPKFYRGGNTRHTRNMRCAHDSATKILSGPYTQDEFFEDLLR
VTQGQTDEVLARLMIRESQDMLGWIVEQGVRWQPSLGGTLSLGRTNSFFLGGGRAMLNALYLTAERLGVEVLYDTEVVEM
EMEGGRCSGVLVRRPDGMHRISAKAVVAAAGGFEANIDWLKEAWGPSAGNFLIRGTPYNRGTVLKMLMDKGVETIRDPTQ
CHAVAIDARAPKFDGGIITRLDCVVFGIVVNNRAERFYDEGEDIWPKRYAIWGRLVAQQPDQIAYILFDASSLELFMPSL
YPPIAAPTIAELAGKLGLDAEALTRTVEGFNAAVRPGTFDDKTLDDCRTEGLTPPKSHWARKLQTAPYYAYPVRPGITFT
YLGVRVGADARMRMADGTGADNLFAAGEIMAGNVLGRGYAAGIGMTIGSVFGRIAGREAADHARH
>Mature_465_residues
MDATLARVDVVVIGGGNAGLCAAISARRSGASVLVVEAAPKFYRGGNTRHTRNMRCAHDSATKILSGPYTQDEFFEDLLR
VTQGQTDEVLARLMIRESQDMLGWIVEQGVRWQPSLGGTLSLGRTNSFFLGGGRAMLNALYLTAERLGVEVLYDTEVVEM
EMEGGRCSGVLVRRPDGMHRISAKAVVAAAGGFEANIDWLKEAWGPSAGNFLIRGTPYNRGTVLKMLMDKGVETIRDPTQ
CHAVAIDARAPKFDGGIITRLDCVVFGIVVNNRAERFYDEGEDIWPKRYAIWGRLVAQQPDQIAYILFDASSLELFMPSL
YPPIAAPTIAELAGKLGLDAEALTRTVEGFNAAVRPGTFDDKTLDDCRTEGLTPPKSHWARKLQTAPYYAYPVRPGITFT
YLGVRVGADARMRMADGTGADNLFAAGEIMAGNVLGRGYAAGIGMTIGSVFGRIAGREAADHARH

Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71986328, Length=341, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 50385; Mature: 50385

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATLARVDVVVIGGGNAGLCAAISARRSGASVLVVEAAPKFYRGGNTRHTRNMRCAHDS
CCCCEEEEEEEEEECCCCCEEEEEHHCCCCCEEEEEECCCHHHCCCCCCCCCCCEECCCH
ATKILSGPYTQDEFFEDLLRVTQGQTDEVLARLMIRESQDMLGWIVEQGVRWQPSLGGTL
HHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCEE
SLGRTNSFFLGGGRAMLNALYLTAERLGVEVLYDTEVVEMEMEGGRCSGVLVRRPDGMHR
EECCCCCEEEECHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCCEEEEECCCCCHH
ISAKAVVAAAGGFEANIDWLKEAWGPSAGNFLIRGTPYNRGTVLKMLMDKGVETIRDPTQ
HHHEEEEEECCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCHHHHCCCCC
CHAVAIDARAPKFDGGIITRLDCVVFGIVVNNRAERFYDEGEDIWPKRYAIWGRLVAQQP
EEEEEEECCCCCCCCCHHEEEHHEEEEHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCC
DQIAYILFDASSLELFMPSLYPPIAAPTIAELAGKLGLDAEALTRTVEGFNAAVRPGTFD
CCEEEEEEECCCHHEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCC
DKTLDDCRTEGLTPPKSHWARKLQTAPYYAYPVRPGITFTYLGVRVGADARMRMADGTGA
CCCHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCEEEECCCCCC
DNLFAAGEIMAGNVLGRGYAAGIGMTIGSVFGRIAGREAADHARH
CCEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MDATLARVDVVVIGGGNAGLCAAISARRSGASVLVVEAAPKFYRGGNTRHTRNMRCAHDS
CCCCEEEEEEEEEECCCCCEEEEEHHCCCCCEEEEEECCCHHHCCCCCCCCCCCEECCCH
ATKILSGPYTQDEFFEDLLRVTQGQTDEVLARLMIRESQDMLGWIVEQGVRWQPSLGGTL
HHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCEE
SLGRTNSFFLGGGRAMLNALYLTAERLGVEVLYDTEVVEMEMEGGRCSGVLVRRPDGMHR
EECCCCCEEEECHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCCEEEEECCCCCHH
ISAKAVVAAAGGFEANIDWLKEAWGPSAGNFLIRGTPYNRGTVLKMLMDKGVETIRDPTQ
HHHEEEEEECCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCHHHHCCCCC
CHAVAIDARAPKFDGGIITRLDCVVFGIVVNNRAERFYDEGEDIWPKRYAIWGRLVAQQP
EEEEEEECCCCCCCCCHHEEEHHEEEEHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCC
DQIAYILFDASSLELFMPSLYPPIAAPTIAELAGKLGLDAEALTRTVEGFNAAVRPGTFD
CCEEEEEEECCCHHEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCC
DKTLDDCRTEGLTPPKSHWARKLQTAPYYAYPVRPGITFTYLGVRVGADARMRMADGTGA
CCCHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCEEEECCCCCC
DNLFAAGEIMAGNVLGRGYAAGIGMTIGSVFGRIAGREAADHARH
CCEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10455032; 10581549 [H]