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The map label for this gene is hupF [H]

Identifier: 154246120

GI number: 154246120

Start: 2438398

End: 2438730

Strand: Direct

Name: hupF [H]

Synonym: Xaut_2177

Alternate gene names: 154246120

Gene position: 2438398-2438730 (Clockwise)

Preceding gene: 154246119

Following gene: 154246121

Centisome position: 45.93

GC content: 72.97

Gene sequence:

>333_bases
ATGTGCCTCGGCCTGCCCATGCGCATCGAGGAGGTGGAGGGCAGCTTCGCCCTGTGCCGCGCCGAGGGCGCCCGCGAGCG
GGTGGATCTTGCCCTGGTGCCCGAAGCGCGCACCGGCGACCATGTGCTCGTCTTCCAGGGCACCGCCCGTCGCCTGCTGG
ACGCTGACGAGGCGCGCCTCATCACCGAGGCGCTCGCCGGCGTCGCCGCCATCATGGCGGGGGAGGCGGATGCCGCAGTC
ATTGACCGCGCCTTCGCCGACCTCGCCGACCGCGAGCCCACTTTGCCGCCCCATCTCGCCGCGGCCTATGCCGCCGGCCG
AAAGGAAGCCTGA

Upstream 100 bases:

>100_bases
CGCCGTCGGCCGGCAGTCCTACGAAAGCGAGCGCCCGAGCGCGGAGGCGGCGTGCCGCATCGGCGATCCCCGCGTCCTCG
CCACCTCCCGGAGCTGAACC

Downstream 100 bases:

>100_bases
TGTCCGAGGCCGCGATCCCCGATCCCAACCTGCATCCCCTGGTGCGCCGGCTCGTGTCCGAGCGCGCCTGGCCCTATCTG
GAAGCGCCCGAGGACACGGC

Product: hydrogenase assembly chaperone HypC/HupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MCLGLPMRIEEVEGSFALCRAEGARERVDLALVPEARTGDHVLVFQGTARRLLDADEARLITEALAGVAAIMAGEADAAV
IDRAFADLADREPTLPPHLAAAYAAGRKEA

Sequences:

>Translated_110_residues
MCLGLPMRIEEVEGSFALCRAEGARERVDLALVPEARTGDHVLVFQGTARRLLDADEARLITEALAGVAAIMAGEADAAV
IDRAFADLADREPTLPPHLAAAYAAGRKEA
>Mature_110_residues
MCLGLPMRIEEVEGSFALCRAEGARERVDLALVPEARTGDHVLVFQGTARRLLDADEARLITEALAGVAAIMAGEADAAV
IDRAFADLADREPTLPPHLAAAYAAGRKEA

Specific function: Unknown

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 11640; Mature: 11640

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGLPMRIEEVEGSFALCRAEGARERVDLALVPEARTGDHVLVFQGTARRLLDADEARL
CCCCCCCCHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHCCHHHHH
ITEALAGVAAIMAGEADAAVIDRAFADLADREPTLPPHLAAAYAAGRKEA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MCLGLPMRIEEVEGSFALCRAEGARERVDLALVPEARTGDHVLVFQGTARRLLDADEARL
CCCCCCCCHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHCCHHHHH
ITEALAGVAAIMAGEADAAVIDRAFADLADREPTLPPHLAAAYAAGRKEA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8230232; 8163174; 12597275 [H]