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The map label for this gene is hupZ [H]

Identifier: 154246118

GI number: 154246118

Start: 2436621

End: 2437373

Strand: Direct

Name: hupZ [H]

Synonym: Xaut_2175

Alternate gene names: 154246118

Gene position: 2436621-2437373 (Clockwise)

Preceding gene: 154246117

Following gene: 154246119

Centisome position: 45.9

GC content: 62.95

Gene sequence:

>753_bases
ATGAGCGAGACCTCACTGTCCGGCGCCGCGCCTCCGGCGGCCCCTGTTTCCCCGGTTGCCAAGGCGGCGGCCGGTGGAAA
GAAGCTGACCACCGTCTATGTGTACGAGGCGCCGGTGCGCCTCTGGCACTGGGTGAATGCGCTTTCCATCGTGGTGCTGT
GCATCACCGGCTACTTCATCGGCTCGCCGTTCCCGACCCTGTCGGGGGAGGCGAGTTCCCACTACCTCATGGGCACCATC
CGCTTCGTGCACTTCTCGGCGGGCTATATCCTCGCCGTGGGCTTCCTCGGGCGGATCATCTGGGCCTTCTTCGGCAACAA
GTATTCCCGCGAGCTGTTCACCTTCCCGTTCTGGCGCAAGAGCTTCTGGCGGGGCTTCTTCGTCGAGATCAAGTGGTATG
CGTTCCTCAAGCCCCGCCCGCTGAAGTTCGTGGGGCACAATCCGCTGGCCCAGGTCTTCATGTTTTTCGTGATGGTGCTG
GGCCTGACCTTCATGATCGTCACCGGCTTTGCCCTCTATTCGGAGGGGGCCGGAGCAGGCTCATGGCAGGACCGGCTGTT
CGGCTGGGTGCTGCCGCTGCTGGGCGGGTCCATGCAGGTGCACACGCTGCATCACCTGGGCATGTGGATGATTATCCTGT
TCGTGATCATCCATGTCTATTCGGTGATCCGCGAGGACATCATGTCCCGCCAGACCATGGTCTCGGCCATCACCAACGGC
CACCGCACCTTCCGGGACGACGACCCGGAGTGA

Upstream 100 bases:

>100_bases
CCTGCACTCGTTCGACCCGTGCCTGGCCTGCTCCACCCATGTCATGTCCGAAGGCGGCGAGGAACTCGCCCGCGTCACCG
TCCGCTGAGGGAGGGATGCC

Downstream 100 bases:

>100_bases
GCGGCGGAAGCAGCTTGGAAGGAAAGGGCGCGGCCTCGGCCGCGCCCTTTTCGTTTGGCGAGCCGTCGCGCGTTTGGGTC
GGCGGAGAGGCCTGCGCCGT

Product: Ni/Fe-hydrogenase, b-type cytochrome subunit

Products: oxidized ferredoxin; H2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSETSLSGAAPPAAPVSPVAKAAAGGKKLTTVYVYEAPVRLWHWVNALSIVVLCITGYFIGSPFPTLSGEASSHYLMGTI
RFVHFSAGYILAVGFLGRIIWAFFGNKYSRELFTFPFWRKSFWRGFFVEIKWYAFLKPRPLKFVGHNPLAQVFMFFVMVL
GLTFMIVTGFALYSEGAGAGSWQDRLFGWVLPLLGGSMQVHTLHHLGMWMIILFVIIHVYSVIREDIMSRQTMVSAITNG
HRTFRDDDPE

Sequences:

>Translated_250_residues
MSETSLSGAAPPAAPVSPVAKAAAGGKKLTTVYVYEAPVRLWHWVNALSIVVLCITGYFIGSPFPTLSGEASSHYLMGTI
RFVHFSAGYILAVGFLGRIIWAFFGNKYSRELFTFPFWRKSFWRGFFVEIKWYAFLKPRPLKFVGHNPLAQVFMFFVMVL
GLTFMIVTGFALYSEGAGAGSWQDRLFGWVLPLLGGSMQVHTLHHLGMWMIILFVIIHVYSVIREDIMSRQTMVSAITNG
HRTFRDDDPE
>Mature_249_residues
SETSLSGAAPPAAPVSPVAKAAAGGKKLTTVYVYEAPVRLWHWVNALSIVVLCITGYFIGSPFPTLSGEASSHYLMGTIR
FVHFSAGYILAVGFLGRIIWAFFGNKYSRELFTFPFWRKSFWRGFFVEIKWYAFLKPRPLKFVGHNPLAQVFMFFVMVLG
LTFMIVTGFALYSEGAGAGSWQDRLFGWVLPLLGGSMQVHTLHHLGMWMIILFVIIHVYSVIREDIMSRQTMVSAITNGH
RTFRDDDPE

Specific function: Probable b-type cytochrome [H]

COG id: COG1969

COG function: function code C; Ni,Fe-hydrogenase I cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupC/hyaC/hydC family [H]

Homologues:

Organism=Escherichia coli, GI1787208, Length=223, Percent_Identity=50.2242152466368, Blast_Score=221, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174
- InterPro:   IPR000516 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 28146; Mature: 28015

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00882 NI_HGENASE_CYTB_1 ; PS00883 NI_HGENASE_CYTB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETSLSGAAPPAAPVSPVAKAAAGGKKLTTVYVYEAPVRLWHWVNALSIVVLCITGYFI
CCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHH
GSPFPTLSGEASSHYLMGTIRFVHFSAGYILAVGFLGRIIWAFFGNKYSRELFTFPFWRK
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHH
SFWRGFFVEIKWYAFLKPRPLKFVGHNPLAQVFMFFVMVLGLTFMIVTGFALYSEGAGAG
HHCCEEEEEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SWQDRLFGWVLPLLGGSMQVHTLHHLGMWMIILFVIIHVYSVIREDIMSRQTMVSAITNG
CHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HRTFRDDDPE
CCCCCCCCCC
>Mature Secondary Structure 
SETSLSGAAPPAAPVSPVAKAAAGGKKLTTVYVYEAPVRLWHWVNALSIVVLCITGYFI
CCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHH
GSPFPTLSGEASSHYLMGTIRFVHFSAGYILAVGFLGRIIWAFFGNKYSRELFTFPFWRK
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHH
SFWRGFFVEIKWYAFLKPRPLKFVGHNPLAQVFMFFVMVLGLTFMIVTGFALYSEGAGAG
HHCCEEEEEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SWQDRLFGWVLPLLGGSMQVHTLHHLGMWMIILFVIIHVYSVIREDIMSRQTMVSAITNG
CHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HRTFRDDDPE
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; 2 H+ [C]

Specific reaction: Reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7966281 [H]