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The map label for this gene is 154246079

Identifier: 154246079

GI number: 154246079

Start: 2397673

End: 2398890

Strand: Direct

Name: 154246079

Synonym: Xaut_2136

Alternate gene names: NA

Gene position: 2397673-2398890 (Clockwise)

Preceding gene: 154246076

Following gene: 154246080

Centisome position: 45.16

GC content: 64.94

Gene sequence:

>1218_bases
ATGATGTATCAGGCGTATCAAACCCAGTCCGACTTGATGGGGCCCATCCGCTTCCTGGCGGGGCTCGCGCGCCAGACCCT
CACGGGGCCTCTGATCAATGGTTACGGCCATGCAGGCCTGCGCCATCTCGCCGCTGCCTACGAACTTGTGGAGCGCACCG
GGCTTAGCCACGGGCGCCCCGACTTCGGCCTCCGCACGGTGGAGGTGGGCAACCGCGAGGTCCAGGTCACCGAGGAGAAG
GCGGCGGTGCTGCCCTTCGGCACCCTGCTGCGCTTCAAGAAGGACGTGGACATTGCCCAGCCCCGCGTGCTGGTGGTGGC
GCCCCTCTCCGGCCATTTCGCCACGCTGCTCGTCAACACCGTGAAGACGATGCTGCCGGACCACGATGTGTACATCACAG
ACTGGCACAATGCCCGTGACGTGCCGTTGTCGGCCGGCCGGTTCGCCTTCGACGACTATGTCGAGCACGTCATCAAGTTC
CTGGAGATCATGGGGCCGGGCTCTCACCTCGTGGCCGTGTGCCAGCCGTGCGTCCAGGCGCTGGTGGCGGCGGCGGTGAT
GGCGCAGGACAAGAATCCGGCCGCGCCGGCCTCCATGACGCTCATGGCTGGCCCCATCGACTGCCGGGTCAACCCCACCA
AGGTGAACGAGCTCGCCACCTCCAAGCCCATTTCCTGGTTCGAGAAGAACCTGATCGCCACGGTGCCGAAGGGGTTTCCC
GGCTCGGGCCGCAAGGTCTATCCGGGCTTCGTGCAGCTCACTGCGTTCGTCAGCATGAACGTGAGCCGGCACGTCAAGGC
CCATCTCGATCTCTATAACGCCCTCGCCGAGGGTGATCACGAGAAGGCCGAGGCCACCAAGTCCTTCTACGACGAATATT
TCGCGGTGCTGGACCTCGACGCCGAGTTCTACCTGGAAACGGTGCGGTACGTGTTCCAGGAATACCGGCTGCCCAAGGGC
GAGCTGACCTATCGCGGCCAGCCCATCGACTTCAAGGCCATCCGCAAGACGGCCCTTTTGACGGTGGAAGGCGAGCGGGA
CGACATCTGCTCCATCGGCCAGACCATGGCGGCGCAGGACATCTGCTCGGGCCTGCGGCCCCACAAGAAGCGCCATCACA
TGCAGGCCGGCGTCGGCCATTACGGCGTCTTCTCCGGCCGCAAATGGGCCGGGCAGGTCTACCCGATCGTGCGCAACCAC
ATCCTGTCCAGCGACTGA

Upstream 100 bases:

>100_bases
GCAGACGGGGAATAGAAGGACCTTTCAGCGTCATGCTGCAAATGATATTCAGGTCAGTCTCTCCGGGGCACAGCCGCCGG
TCGCAGCGGCACGGGCAGCC

Downstream 100 bases:

>100_bases
TCCTCTAACGGTCCGGGGCGCCTGCCCCGGCCGCGTTCCACCGACATCGCCTGACGGGCCAGGGCAGGCCGGACCAGAGC
CGGCCGCCTTGGCTCGGAGA

Product: polyhydroxyalkanoate depolymerase, intracellular

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Poly(3-Hydroxyalkanoate)Synthetase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; PHB De-Polymerase Domain Protein; PHB De-Polymerase; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MMYQAYQTQSDLMGPIRFLAGLARQTLTGPLINGYGHAGLRHLAAAYELVERTGLSHGRPDFGLRTVEVGNREVQVTEEK
AAVLPFGTLLRFKKDVDIAQPRVLVVAPLSGHFATLLVNTVKTMLPDHDVYITDWHNARDVPLSAGRFAFDDYVEHVIKF
LEIMGPGSHLVAVCQPCVQALVAAAVMAQDKNPAAPASMTLMAGPIDCRVNPTKVNELATSKPISWFEKNLIATVPKGFP
GSGRKVYPGFVQLTAFVSMNVSRHVKAHLDLYNALAEGDHEKAEATKSFYDEYFAVLDLDAEFYLETVRYVFQEYRLPKG
ELTYRGQPIDFKAIRKTALLTVEGERDDICSIGQTMAAQDICSGLRPHKKRHHMQAGVGHYGVFSGRKWAGQVYPIVRNH
ILSSD

Sequences:

>Translated_405_residues
MMYQAYQTQSDLMGPIRFLAGLARQTLTGPLINGYGHAGLRHLAAAYELVERTGLSHGRPDFGLRTVEVGNREVQVTEEK
AAVLPFGTLLRFKKDVDIAQPRVLVVAPLSGHFATLLVNTVKTMLPDHDVYITDWHNARDVPLSAGRFAFDDYVEHVIKF
LEIMGPGSHLVAVCQPCVQALVAAAVMAQDKNPAAPASMTLMAGPIDCRVNPTKVNELATSKPISWFEKNLIATVPKGFP
GSGRKVYPGFVQLTAFVSMNVSRHVKAHLDLYNALAEGDHEKAEATKSFYDEYFAVLDLDAEFYLETVRYVFQEYRLPKG
ELTYRGQPIDFKAIRKTALLTVEGERDDICSIGQTMAAQDICSGLRPHKKRHHMQAGVGHYGVFSGRKWAGQVYPIVRNH
ILSSD
>Mature_405_residues
MMYQAYQTQSDLMGPIRFLAGLARQTLTGPLINGYGHAGLRHLAAAYELVERTGLSHGRPDFGLRTVEVGNREVQVTEEK
AAVLPFGTLLRFKKDVDIAQPRVLVVAPLSGHFATLLVNTVKTMLPDHDVYITDWHNARDVPLSAGRFAFDDYVEHVIKF
LEIMGPGSHLVAVCQPCVQALVAAAVMAQDKNPAAPASMTLMAGPIDCRVNPTKVNELATSKPISWFEKNLIATVPKGFP
GSGRKVYPGFVQLTAFVSMNVSRHVKAHLDLYNALAEGDHEKAEATKSFYDEYFAVLDLDAEFYLETVRYVFQEYRLPKG
ELTYRGQPIDFKAIRKTALLTVEGERDDICSIGQTMAAQDICSGLRPHKKRHHMQAGVGHYGVFSGRKWAGQVYPIVRNH
ILSSD

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44868; Mature: 44868

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMYQAYQTQSDLMGPIRFLAGLARQTLTGPLINGYGHAGLRHLAAAYELVERTGLSHGRP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
DFGLRTVEVGNREVQVTEEKAAVLPFGTLLRFKKDVDIAQPRVLVVAPLSGHFATLLVNT
CCCEEEEEECCCEEEEECCCCHHCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHH
VKTMLPDHDVYITDWHNARDVPLSAGRFAFDDYVEHVIKFLEIMGPGSHLVAVCQPCVQA
HHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LVAAAVMAQDKNPAAPASMTLMAGPIDCRVNPTKVNELATSKPISWFEKNLIATVPKGFP
HHHHHHHHCCCCCCCCCCEEEEECCEECCCCHHHHHHHHCCCCHHHHHHHHHEECCCCCC
GSGRKVYPGFVQLTAFVSMNVSRHVKAHLDLYNALAEGDHEKAEATKSFYDEYFAVLDLD
CCCCEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECC
AEFYLETVRYVFQEYRLPKGELTYRGQPIDFKAIRKTALLTVEGERDDICSIGQTMAAQD
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHCEEEEEEECCCCCHHHHHHHHHHHH
ICSGLRPHKKRHHMQAGVGHYGVFSGRKWAGQVYPIVRNHILSSD
HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MMYQAYQTQSDLMGPIRFLAGLARQTLTGPLINGYGHAGLRHLAAAYELVERTGLSHGRP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
DFGLRTVEVGNREVQVTEEKAAVLPFGTLLRFKKDVDIAQPRVLVVAPLSGHFATLLVNT
CCCEEEEEECCCEEEEECCCCHHCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHH
VKTMLPDHDVYITDWHNARDVPLSAGRFAFDDYVEHVIKFLEIMGPGSHLVAVCQPCVQA
HHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LVAAAVMAQDKNPAAPASMTLMAGPIDCRVNPTKVNELATSKPISWFEKNLIATVPKGFP
HHHHHHHHCCCCCCCCCCEEEEECCEECCCCHHHHHHHHCCCCHHHHHHHHHEECCCCCC
GSGRKVYPGFVQLTAFVSMNVSRHVKAHLDLYNALAEGDHEKAEATKSFYDEYFAVLDLD
CCCCEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECC
AEFYLETVRYVFQEYRLPKGELTYRGQPIDFKAIRKTALLTVEGERDDICSIGQTMAAQD
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHCEEEEEEECCCCCHHHHHHHHHHHH
ICSGLRPHKKRHHMQAGVGHYGVFSGRKWAGQVYPIVRNHILSSD
HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA