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The map label for this gene is ybdA [C]

Identifier: 154246080

GI number: 154246080

Start: 2398999

End: 2400273

Strand: Direct

Name: ybdA [C]

Synonym: Xaut_2137

Alternate gene names: 154246080

Gene position: 2398999-2400273 (Clockwise)

Preceding gene: 154246079

Following gene: 154246081

Centisome position: 45.19

GC content: 70.67

Gene sequence:

>1275_bases
GTGTCCCAAGCTTCTGCCCCGACCCCATCCCCTTCCGAACGGCTGCGGGATCACCCGGCCTTTCTGCTGTTCTGGATCAG
CCGCGTCGCTTCCGCCCTCGCCTTCCAGATGCTGGGAGTGGCAGTGGGCTGGCTGGTCTATGCCCTCACCGGCAGCGCAG
TGGCGCTGGGACTGGTGGGCCTTGCCCAGTTCCTGCCCCTGCTGTTCCTGAGCCTGATCGCCGGCCATGCCGCCGACGTG
TTCGACCGGCGCCGCATCGTCTTCATCGGCCAGTCCGTCGCCGCCGTGACTCTCGCCCTGCTGGCCCTGGGGCTTGGCGA
GGGGGTGGTCGGCCTTGCCGCCATTTACGGCGCGGTGGTGATGCTCGGCGCCTGCCGCGCCTTCGAGCATCCCACCATGG
CGGCGCTATTGCCCCGCCTCGTGCCCGGCGAGGTGTTGCCCCGGGCGCTGGCCGTGTCCTCCTCCGCCATGCAGATGGCC
ACCATCGCCGGCCCGGCCGTGGGCGGCTTCGCCTATGCGCTCGGTCCCACCGTGCCGCTGGCGGGCGCCGCCCTGTGCTA
TGCCGCCGCCGCCCTCGCCATGATGGCGGTGCGCCATGTGCACGCCCCGGTGCAGCGCGGCGGAATGACCCTCGCGACAC
TGCTCGAGGGCCTTGCCTTCATCCGCGGGCACAAGGTGGTGCTCGGCTCCATCTCCCTCGACCTGTTCGCGGTGCTGCTG
GGCGGTGTCACGGCGCTGTTGCCCATCTTTGCCAGCGATATCCTGCACGTGGGCGCGCAAGGCCTCGGCGCCCTGCGCGC
GGCCCCGGCGGTGGGCGCCGTGCTCATGTCGGTGGTGCTCGCCCGCGTGCCGCTGTCGCACAAGGTGGGGCACAAGATGT
TCGCCGCCGTGGCGGTGTTCGGCCTCGCCACCGTGGTGTTCTCCCTTTCCAGCAGCTTCCTTCTGTCGTTGGGTGCCCTG
TTCGTGCTGGGGGCTGCGGACAATGTGAGCGTGGTCATCCGCTCCTCGCTGGTGCAGCTCTCCACCCCCGATGCCATGCG
CGGACGGGTGAGCGCGGTGAACTCGCTGTTCATCGGCACCTCCAACCAGCTCGGCGAGTTCGAATCGGGCATGGCCGCCG
CGCTGCTCGGCGCGGTGGGTGCGGGGGTGGCGGGTGGCGTCGGCACCATCCTCGTGGCCTTGCTGTGGATGCGCCTCTTC
CCCGGCCTGCTGAAGGTGGACCATATGCCCGCCCGCCCGGCGCGGACCCATCCCGCGCAGGCCAAATCCGCCTGA

Upstream 100 bases:

>100_bases
CGGTCCGGGGCGCCTGCCCCGGCCGCGTTCCACCGACATCGCCTGACGGGCCAGGGCAGGCCGGACCAGAGCCGGCCGCC
TTGGCTCGGAGATCTGCCCC

Downstream 100 bases:

>100_bases
GCCGATGCGGCGCCAGAGCGGCCGGGAGCGAGCGTCATCATTTGGTTTGCCGGCTTCCGCGCGCCTCTTCGGTTGACGCG
CGGGCGCGCTTTTCCCATGG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; MFS Permease; Transmembrane Protein; DrugProton Antiporter; Transporter Facilitator Family; Facilitator Superfamily Transporter; Permease Of Facilitator Superfamily; MFS Family Transporter; Membrane Transporter; Facilitator Superfamily; Facilitator MFS1 Protein; Permease Facilitator Superfamily; Siderophore Export Protein; Facilitator Superfamily Transporter Permease; Permease Protein; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Integral Membrane Efflux Protein; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Macrolide-Efflux Protein; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Facilitator Superfamily Transporter Transporter

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSQASAPTPSPSERLRDHPAFLLFWISRVASALAFQMLGVAVGWLVYALTGSAVALGLVGLAQFLPLLFLSLIAGHAADV
FDRRRIVFIGQSVAAVTLALLALGLGEGVVGLAAIYGAVVMLGACRAFEHPTMAALLPRLVPGEVLPRALAVSSSAMQMA
TIAGPAVGGFAYALGPTVPLAGAALCYAAAALAMMAVRHVHAPVQRGGMTLATLLEGLAFIRGHKVVLGSISLDLFAVLL
GGVTALLPIFASDILHVGAQGLGALRAAPAVGAVLMSVVLARVPLSHKVGHKMFAAVAVFGLATVVFSLSSSFLLSLGAL
FVLGAADNVSVVIRSSLVQLSTPDAMRGRVSAVNSLFIGTSNQLGEFESGMAAALLGAVGAGVAGGVGTILVALLWMRLF
PGLLKVDHMPARPARTHPAQAKSA

Sequences:

>Translated_424_residues
MSQASAPTPSPSERLRDHPAFLLFWISRVASALAFQMLGVAVGWLVYALTGSAVALGLVGLAQFLPLLFLSLIAGHAADV
FDRRRIVFIGQSVAAVTLALLALGLGEGVVGLAAIYGAVVMLGACRAFEHPTMAALLPRLVPGEVLPRALAVSSSAMQMA
TIAGPAVGGFAYALGPTVPLAGAALCYAAAALAMMAVRHVHAPVQRGGMTLATLLEGLAFIRGHKVVLGSISLDLFAVLL
GGVTALLPIFASDILHVGAQGLGALRAAPAVGAVLMSVVLARVPLSHKVGHKMFAAVAVFGLATVVFSLSSSFLLSLGAL
FVLGAADNVSVVIRSSLVQLSTPDAMRGRVSAVNSLFIGTSNQLGEFESGMAAALLGAVGAGVAGGVGTILVALLWMRLF
PGLLKVDHMPARPARTHPAQAKSA
>Mature_423_residues
SQASAPTPSPSERLRDHPAFLLFWISRVASALAFQMLGVAVGWLVYALTGSAVALGLVGLAQFLPLLFLSLIAGHAADVF
DRRRIVFIGQSVAAVTLALLALGLGEGVVGLAAIYGAVVMLGACRAFEHPTMAALLPRLVPGEVLPRALAVSSSAMQMAT
IAGPAVGGFAYALGPTVPLAGAALCYAAAALAMMAVRHVHAPVQRGGMTLATLLEGLAFIRGHKVVLGSISLDLFAVLLG
GVTALLPIFASDILHVGAQGLGALRAAPAVGAVLMSVVLARVPLSHKVGHKMFAAVAVFGLATVVFSLSSSFLLSLGALF
VLGAADNVSVVIRSSLVQLSTPDAMRGRVSAVNSLFIGTSNQLGEFESGMAAALLGAVGAGVAGGVGTILVALLWMRLFP
GLLKVDHMPARPARTHPAQAKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43103; Mature: 42972

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQASAPTPSPSERLRDHPAFLLFWISRVASALAFQMLGVAVGWLVYALTGSAVALGLVG
CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQFLPLLFLSLIAGHAADVFDRRRIVFIGQSVAAVTLALLALGLGEGVVGLAAIYGAVV
HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MLGACRAFEHPTMAALLPRLVPGEVLPRALAVSSSAMQMATIAGPAVGGFAYALGPTVPL
HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH
AGAALCYAAAALAMMAVRHVHAPVQRGGMTLATLLEGLAFIRGHKVVLGSISLDLFAVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
GGVTALLPIFASDILHVGAQGLGALRAAPAVGAVLMSVVLARVPLSHKVGHKMFAAVAVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GLATVVFSLSSSFLLSLGALFVLGAADNVSVVIRSSLVQLSTPDAMRGRVSAVNSLFIGT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
SNQLGEFESGMAAALLGAVGAGVAGGVGTILVALLWMRLFPGLLKVDHMPARPARTHPAQ
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
AKSA
CCCC
>Mature Secondary Structure 
SQASAPTPSPSERLRDHPAFLLFWISRVASALAFQMLGVAVGWLVYALTGSAVALGLVG
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQFLPLLFLSLIAGHAADVFDRRRIVFIGQSVAAVTLALLALGLGEGVVGLAAIYGAVV
HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MLGACRAFEHPTMAALLPRLVPGEVLPRALAVSSSAMQMATIAGPAVGGFAYALGPTVPL
HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH
AGAALCYAAAALAMMAVRHVHAPVQRGGMTLATLLEGLAFIRGHKVVLGSISLDLFAVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
GGVTALLPIFASDILHVGAQGLGALRAAPAVGAVLMSVVLARVPLSHKVGHKMFAAVAVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GLATVVFSLSSSFLLSLGALFVLGAADNVSVVIRSSLVQLSTPDAMRGRVSAVNSLFIGT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
SNQLGEFESGMAAALLGAVGAGVAGGVGTILVALLWMRLFPGLLKVDHMPARPARTHPAQ
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
AKSA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA