Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is cbh [H]
Identifier: 154246070
GI number: 154246070
Start: 2386825
End: 2388108
Strand: Reverse
Name: cbh [H]
Synonym: Xaut_2127
Alternate gene names: 154246070
Gene position: 2388108-2386825 (Counterclockwise)
Preceding gene: 154246072
Following gene: 154246069
Centisome position: 44.98
GC content: 66.98
Gene sequence:
>1284_bases ATGTCTTTTCGGGGCAGACAGGGCATGGATGACCGGCTCCGCCTTGCTGTGTGGGCGGAGCCGGTATCTCTTTCAGCCGT CTATCCGGCGGTCGATGCGGTGCTGCTGGAGCCTCAGGCTCCGGCAGCACGCTCAAAAAATAATCCGGCCGCCCAACCGG AGACGGTCATGCCGCTTACGCGCGCCCCCCTCACATTCAAGTCCATCCGCACCGCCGCACTCGCCGCCGCCGCGCTCTAT GTCGCAGGCCTTGGCGCCGGGGTGGCGCAGGCCTGCACCCGCGCGGTCTATCTCGGCTCCGATGGCGTGGTCATCACCGG CCGGTCCATGGACTGGGCGGAAGACATGCGCACCAATCTCTGGGCGTTCCCGGCGGGCATGGCACGCAGCGGCGCAGCGG GCGCCAACACCCCGAAATGGGTGGCCAAATACGGCAGCCTCATCGCCTCCGGCTATGACGTGGGCACGGCAGACGGCATG AACGAGAAAGGCCTCGTCGCCAACCTGCTCTATCTGGCCGAATCCGAATATGCCAAGCCCGATGGCCGCCCCGCCCTCTC CATCAGCCTGTGGGCGCAATATGTGCTCGACAATTTCGCCACCGTGAGCGAGGCGGTGACGGCGCTGTCCGCCGAGCCGT TCGTGGTGGTGACGGCGAACCTGCCCAATGGCGCGGGCGCACAGTTGCACCTCGCTATCTCCGATCCCTCCGGCGACAGC GCCATCTTCGAATATCTGGGCGGCAAGCTGGTGGTCCACCATGGCCGCCAATACCAGGTGATGACCAATTCGCCGTCGTT CGACCAGCAGCTGGCGCTGAACAGCTACTGGCAGCAGATCGGCGGCACGGTGTTCCTGCCCGGCACCAACCGGGCGGCCG ACCGCTTCGCCCGCGCCAGCTTCTTCATCAAGGCCATTCCGACGCAGGCCGCCCCGGCCATCCTCACCGCCGTGCCGGAG GGCACCTATGCCAACCAGGCGGTGGCCAGCGTCGCCAGCGTGATGCGCTCGGTGAGCGTGCCGCTGGGCCTCACCACGCC CGGCGAGCCGAACATCGCCTCCACCCTGTGGCGGACGGTGAGCGACCAGAAGGACCGCGTCTATTTCTTCGATTCCGCCA CCAGCCCCAACAGCTTCTGGGTGCCCCTCGACAGTCTCGACCTCAAGGCCGGGGCGCCGGTGAAGAAGCTGACGCTGACC GGCGGCAAGGTCTATTCGGGCAATGCGGCCGGGCACTTCGAGCCGGCCCAGCCCTTCGCCTTCCTGCCCGTGGACGTGAA GTAG
Upstream 100 bases:
>100_bases GCTACGACTTTTGTCCATAGCAAAAATCTGACCGGCTTCCGCGAAATTTGATCCATCTCAGAGAATCCAGCCGGGGGTGG TGGTTATCTCCCTCTTGTCC
Downstream 100 bases:
>100_bases CACGCCCCGGCTGCATCGGCGGGACCGGACAGCGCGGGGCGGCCAAGGGCTGCCGCGCGTTGTCCCGGGCTGCCCCGTCC AAGATGCTGCAATGCGGTAA
Product: choloylglycine hydrolase
Products: NA
Alternate protein names: Bile salt hydrolase; Conjugated bile acid hydrolase; CBAH [H]
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSFRGRQGMDDRLRLAVWAEPVSLSAVYPAVDAVLLEPQAPAARSKNNPAAQPETVMPLTRAPLTFKSIRTAALAAAALY VAGLGAGVAQACTRAVYLGSDGVVITGRSMDWAEDMRTNLWAFPAGMARSGAAGANTPKWVAKYGSLIASGYDVGTADGM NEKGLVANLLYLAESEYAKPDGRPALSISLWAQYVLDNFATVSEAVTALSAEPFVVVTANLPNGAGAQLHLAISDPSGDS AIFEYLGGKLVVHHGRQYQVMTNSPSFDQQLALNSYWQQIGGTVFLPGTNRAADRFARASFFIKAIPTQAAPAILTAVPE GTYANQAVASVASVMRSVSVPLGLTTPGEPNIASTLWRTVSDQKDRVYFFDSATSPNSFWVPLDSLDLKAGAPVKKLTLT GGKVYSGNAAGHFEPAQPFAFLPVDVK
Sequences:
>Translated_427_residues MSFRGRQGMDDRLRLAVWAEPVSLSAVYPAVDAVLLEPQAPAARSKNNPAAQPETVMPLTRAPLTFKSIRTAALAAAALY VAGLGAGVAQACTRAVYLGSDGVVITGRSMDWAEDMRTNLWAFPAGMARSGAAGANTPKWVAKYGSLIASGYDVGTADGM NEKGLVANLLYLAESEYAKPDGRPALSISLWAQYVLDNFATVSEAVTALSAEPFVVVTANLPNGAGAQLHLAISDPSGDS AIFEYLGGKLVVHHGRQYQVMTNSPSFDQQLALNSYWQQIGGTVFLPGTNRAADRFARASFFIKAIPTQAAPAILTAVPE GTYANQAVASVASVMRSVSVPLGLTTPGEPNIASTLWRTVSDQKDRVYFFDSATSPNSFWVPLDSLDLKAGAPVKKLTLT GGKVYSGNAAGHFEPAQPFAFLPVDVK >Mature_426_residues SFRGRQGMDDRLRLAVWAEPVSLSAVYPAVDAVLLEPQAPAARSKNNPAAQPETVMPLTRAPLTFKSIRTAALAAAALYV AGLGAGVAQACTRAVYLGSDGVVITGRSMDWAEDMRTNLWAFPAGMARSGAAGANTPKWVAKYGSLIASGYDVGTADGMN EKGLVANLLYLAESEYAKPDGRPALSISLWAQYVLDNFATVSEAVTALSAEPFVVVTANLPNGAGAQLHLAISDPSGDSA IFEYLGGKLVVHHGRQYQVMTNSPSFDQQLALNSYWQQIGGTVFLPGTNRAADRFARASFFIKAIPTQAAPAILTAVPEG TYANQAVASVASVMRSVSVPLGLTTPGEPNIASTLWRTVSDQKDRVYFFDSATSPNSFWVPLDSLDLKAGAPVKKLTLTG GKVYSGNAAGHFEPAQPFAFLPVDVK
Specific function: The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.24 [H]
Molecular weight: Translated: 45061; Mature: 44930
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRGRQGMDDRLRLAVWAEPVSLSAVYPAVDAVLLEPQAPAARSKNNPAAQPETVMPLT CCCCCCCCCCCCEEEEEEECCCCCEEHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC RAPLTFKSIRTAALAAAALYVAGLGAGVAQACTRAVYLGSDGVVITGRSMDWAEDMRTNL CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCCEEEECCCCCHHHHHHHHH WAFPAGMARSGAAGANTPKWVAKYGSLIASGYDVGTADGMNEKGLVANLLYLAESEYAKP EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC DGRPALSISLWAQYVLDNFATVSEAVTALSAEPFVVVTANLPNGAGAQLHLAISDPSGDS CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCH AIFEYLGGKLVVHHGRQYQVMTNSPSFDQQLALNSYWQQIGGTVFLPGTNRAADRFARAS HHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHH FFIKAIPTQAAPAILTAVPEGTYANQAVASVASVMRSVSVPLGLTTPGEPNIASTLWRTV HEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHH SDQKDRVYFFDSATSPNSFWVPLDSLDLKAGAPVKKLTLTGGKVYSGNAAGHFEPAQPFA CCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCEE FLPVDVK EEEEECC >Mature Secondary Structure SFRGRQGMDDRLRLAVWAEPVSLSAVYPAVDAVLLEPQAPAARSKNNPAAQPETVMPLT CCCCCCCCCCCEEEEEEECCCCCEEHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC RAPLTFKSIRTAALAAAALYVAGLGAGVAQACTRAVYLGSDGVVITGRSMDWAEDMRTNL CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCCEEEECCCCCHHHHHHHHH WAFPAGMARSGAAGANTPKWVAKYGSLIASGYDVGTADGMNEKGLVANLLYLAESEYAKP EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC DGRPALSISLWAQYVLDNFATVSEAVTALSAEPFVVVTANLPNGAGAQLHLAISDPSGDS CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCH AIFEYLGGKLVVHHGRQYQVMTNSPSFDQQLALNSYWQQIGGTVFLPGTNRAADRFARAS HHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHH FFIKAIPTQAAPAILTAVPEGTYANQAVASVASVMRSVSVPLGLTTPGEPNIASTLWRTV HEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHH SDQKDRVYFFDSATSPNSFWVPLDSLDLKAGAPVKKLTLTGGKVYSGNAAGHFEPAQPFA CCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCEE FLPVDVK EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7618863; 11792842 [H]