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The map label for this gene is ctpA [H]

Identifier: 154246015

GI number: 154246015

Start: 2332401

End: 2333762

Strand: Direct

Name: ctpA [H]

Synonym: Xaut_2072

Alternate gene names: 154246015

Gene position: 2332401-2333762 (Clockwise)

Preceding gene: 154246014

Following gene: 154246016

Centisome position: 43.93

GC content: 65.71

Gene sequence:

>1362_bases
ATGATGCGTCGGACGTCTCTATTTCTTTTCGGCGTGGCGGCTGGCGCCCTTGTGGCCGTTGCAGCGGTTCAGCCGCGGGT
GCTGGCGCCTTTCTTCCTTGGCACCGCCGCCGAGGCGGCGTCCTCGGACACCTACAAGCAGCTCAACCTGTTCGGCGATG
TCTTCGAGCGCGTGCGCTCGGACTATGTCGAAAAGCCCGACGACGCCAAGCTGATCGAGGCCGCCATCAACGGCATGCTT
CAGTCGCTTGACCCGCACTCCTCCTACATGGACGCGAAGAACCACCGCGACATGCAGGTGCAGACGCGCGGCGAATTCGG
TGGCCTCGGCATCGAGGTCATCATGGAAGACGGCCTCGTGAAGGTGGTCACGCCCATGGAGGACACCCCGGCGAGCAAGG
CCGGCATTCTCTCCGGTGACCTCATCGCCAAGCTCGACAACGACCAGGTCCAGGGGCTGACCCTGAACGAGGCCGTGGAC
AAGATGCGCGGCCCGGTGAACACGCCGATCACGCTGACCATCCTGCGCAAGGGCGTGGAGAAGCCCCTCGAGATCAAGCT
GGTGCGCGACACCATCAAGATCCAGACGGTGCGCTCGCGGATCGAATCCGACGACATCGCCTATATCCGCCTGAACTCGT
TCACCAACGAGCAGACCTACGAGGGCCTCAAGAAGGCCATCGACGACCTGACCGCCAAGATCGGGCCGGACAAGATCAAG
GGCTACATCCTTGATCTGCGCAACAATCCCGGCGGCCTGCTGGACCAGGCGGTGGCGGTTTCCGACGCGTTCCTGGAGCG
CGGCGAGATCGTCTCCACCCGCGGCCGCAACGCCGAGGAAACGCAGCGCTTCAACGCCCGTGGTGGCGACCTCACCAAGG
GCCGTCCGGTGATCGTGATGGTCAACGGCGGCTCGGCCTCGGCCTCGGAGATCGTGGCCGGCGCCCTGCAGGACCACAAG
CGCGCCACCGTCCTCGGCTCGCGGACCTTCGGCAAGGCCTCGGTCCAGACCATCATCCCGCTCGGCCAGCAGGGCGCGCT
GCGTCTGACCACGGCGCGCTATTACACGCCGTCGGGCCGCTCCATCCAGGCCAAGGGCATCGAGCCGGACATCGTCCTGG
TTCAGGACCTGCCGGACGAGATGAAGCAGAAGCTCGGCGCGTCCCTCGACACCACCCGCGGCGAAGCCTCGCTGAAGGGC
CACCTGAAGAACGGCGACGACGAGCAGACCGGCTCGCCCTCCTATGTTCCGCCGGACCCCAAGGACGATACCCAGCTGAA
GCTCGCCGTCGAGCTGATGAAGGGCACCGTCAAGAACGCCGCCTTCCCGGCGAGCCCCAACAAGGCGTCCCAGGCGAACT
GA

Upstream 100 bases:

>100_bases
CCTTGGGACAGCCCCAATTGTATGTCGAGTTCCGAAAAGACGGGATTTCGATAGATCCTACCCCGTGGTGGGCCGCAACG
GACAGTCAGAAGGTACGTGG

Downstream 100 bases:

>100_bases
GGTTCACGTTCGGAGGTCTGCCCGGAATATGGGCGCCTGAAGTTTGTGCAAATGCCCCGTCCGAGACATCGGGCGGGGCT
TTTCATTTTGCCCCGGCCGG

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MMRRTSLFLFGVAAGALVAVAAVQPRVLAPFFLGTAAEAASSDTYKQLNLFGDVFERVRSDYVEKPDDAKLIEAAINGML
QSLDPHSSYMDAKNHRDMQVQTRGEFGGLGIEVIMEDGLVKVVTPMEDTPASKAGILSGDLIAKLDNDQVQGLTLNEAVD
KMRGPVNTPITLTILRKGVEKPLEIKLVRDTIKIQTVRSRIESDDIAYIRLNSFTNEQTYEGLKKAIDDLTAKIGPDKIK
GYILDLRNNPGGLLDQAVAVSDAFLERGEIVSTRGRNAEETQRFNARGGDLTKGRPVIVMVNGGSASASEIVAGALQDHK
RATVLGSRTFGKASVQTIIPLGQQGALRLTTARYYTPSGRSIQAKGIEPDIVLVQDLPDEMKQKLGASLDTTRGEASLKG
HLKNGDDEQTGSPSYVPPDPKDDTQLKLAVELMKGTVKNAAFPASPNKASQAN

Sequences:

>Translated_453_residues
MMRRTSLFLFGVAAGALVAVAAVQPRVLAPFFLGTAAEAASSDTYKQLNLFGDVFERVRSDYVEKPDDAKLIEAAINGML
QSLDPHSSYMDAKNHRDMQVQTRGEFGGLGIEVIMEDGLVKVVTPMEDTPASKAGILSGDLIAKLDNDQVQGLTLNEAVD
KMRGPVNTPITLTILRKGVEKPLEIKLVRDTIKIQTVRSRIESDDIAYIRLNSFTNEQTYEGLKKAIDDLTAKIGPDKIK
GYILDLRNNPGGLLDQAVAVSDAFLERGEIVSTRGRNAEETQRFNARGGDLTKGRPVIVMVNGGSASASEIVAGALQDHK
RATVLGSRTFGKASVQTIIPLGQQGALRLTTARYYTPSGRSIQAKGIEPDIVLVQDLPDEMKQKLGASLDTTRGEASLKG
HLKNGDDEQTGSPSYVPPDPKDDTQLKLAVELMKGTVKNAAFPASPNKASQAN
>Mature_453_residues
MMRRTSLFLFGVAAGALVAVAAVQPRVLAPFFLGTAAEAASSDTYKQLNLFGDVFERVRSDYVEKPDDAKLIEAAINGML
QSLDPHSSYMDAKNHRDMQVQTRGEFGGLGIEVIMEDGLVKVVTPMEDTPASKAGILSGDLIAKLDNDQVQGLTLNEAVD
KMRGPVNTPITLTILRKGVEKPLEIKLVRDTIKIQTVRSRIESDDIAYIRLNSFTNEQTYEGLKKAIDDLTAKIGPDKIK
GYILDLRNNPGGLLDQAVAVSDAFLERGEIVSTRGRNAEETQRFNARGGDLTKGRPVIVMVNGGSASASEIVAGALQDHK
RATVLGSRTFGKASVQTIIPLGQQGALRLTTARYYTPSGRSIQAKGIEPDIVLVQDLPDEMKQKLGASLDTTRGEASLKG
HLKNGDDEQTGSPSYVPPDPKDDTQLKLAVELMKGTVKNAAFPASPNKASQAN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=318, Percent_Identity=28.6163522012579, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48815; Mature: 48815

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRTSLFLFGVAAGALVAVAAVQPRVLAPFFLGTAAEAASSDTYKQLNLFGDVFERVRS
CCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DYVEKPDDAKLIEAAINGMLQSLDPHSSYMDAKNHRDMQVQTRGEFGGLGIEVIMEDGLV
HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCEE
KVVTPMEDTPASKAGILSGDLIAKLDNDQVQGLTLNEAVDKMRGPVNTPITLTILRKGVE
EEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHCCCCCCCEEEEEEHHCCC
KPLEIKLVRDTIKIQTVRSRIESDDIAYIRLNSFTNEQTYEGLKKAIDDLTAKIGPDKIK
CCEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHEE
GYILDLRNNPGGLLDQAVAVSDAFLERGEIVSTRGRNAEETQRFNARGGDLTKGRPVIVM
EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEE
VNGGSASASEIVAGALQDHKRATVLGSRTFGKASVQTIIPLGQQGALRLTTARYYTPSGR
EECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHEEECCCCCCCEEEEEEEEECCCCC
SIQAKGIEPDIVLVQDLPDEMKQKLGASLDTTRGEASLKGHLKNGDDEQTGSPSYVPPDP
EEEECCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
KDDTQLKLAVELMKGTVKNAAFPASPNKASQAN
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMRRTSLFLFGVAAGALVAVAAVQPRVLAPFFLGTAAEAASSDTYKQLNLFGDVFERVRS
CCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DYVEKPDDAKLIEAAINGMLQSLDPHSSYMDAKNHRDMQVQTRGEFGGLGIEVIMEDGLV
HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCEE
KVVTPMEDTPASKAGILSGDLIAKLDNDQVQGLTLNEAVDKMRGPVNTPITLTILRKGVE
EEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHCCCCCCCEEEEEEHHCCC
KPLEIKLVRDTIKIQTVRSRIESDDIAYIRLNSFTNEQTYEGLKKAIDDLTAKIGPDKIK
CCEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHEE
GYILDLRNNPGGLLDQAVAVSDAFLERGEIVSTRGRNAEETQRFNARGGDLTKGRPVIVM
EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEE
VNGGSASASEIVAGALQDHKRATVLGSRTFGKASVQTIIPLGQQGALRLTTARYYTPSGR
EECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHEEECCCCCCCEEEEEEEEECCCCC
SIQAKGIEPDIVLVQDLPDEMKQKLGASLDTTRGEASLKGHLKNGDDEQTGSPSYVPPDP
EEEECCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
KDDTQLKLAVELMKGTVKNAAFPASPNKASQAN
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]