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The map label for this gene is nlpD [C]

Identifier: 154246014

GI number: 154246014

Start: 2330971

End: 2332404

Strand: Direct

Name: nlpD [C]

Synonym: Xaut_2071

Alternate gene names: 154246014

Gene position: 2330971-2332404 (Clockwise)

Preceding gene: 154246013

Following gene: 154246015

Centisome position: 43.91

GC content: 71.27

Gene sequence:

>1434_bases
ATGACCGCAAGGGCCGCCCTGCTCCTGTCGCTTGCGCTCGCCGGCCTGTTGCCGGCGGCGACGGCGGCGCTTGGGCAGGC
GGGCGCGGCCCCCGCCGTGGTGCCGCTGCCGCCGGTCCCGCCCTCGCGCTCCGGCCTGGATACCGATGCGCTGAAATCCG
ACCTGCGCGGCACCGAGGAGGCGCAGAAGCGCCTGCGCGCGGAGCTGGAGGCGGCCAAGGGGGATCGCGGCCGGCTCAAC
CAGATGCTGGTGGAGACCGCCACCCGAACCCGCGCCGTCGAGCAGCAGCTCATCGACGTGGAGGGGCGGATCGGCATGCT
CGACGGCTCCGCCACCGACCTCAACGCCTCCCTCGCCAAGCGCCGCGGCGTGCTGGCCCAGGTGCTGGCGGCGCTCATGC
GCATGGGCCGCGAGCCGCCGCCGGCCCTTTTGATGCGCCCGGACGATGCGCTGGACGCGGTGCGCTCGGCCATTCTCCTC
GGCGCGCTGCTGCCGGAACTCAGGGTGGAGGCGGAGACGCTGGCAGCCGACCTCTCGGAGCTGTCCCGGGTGCGCGGCGA
GCTGACCGCTGCCCGCGACAGCCTCACCCGCCTGAAGGCCGAGCTGGACGACGACCGCAAGCGGCTCTCCCTTCTGGTGA
CGGAGCGTCAGCGTCGCCAGGCCGAGGAGCAGCCGGTACCCCCGGCCGAAAGAAGCCAGGCCGAGACGGTGGCCAAGGCC
ACCGGCGACGTGCACGATCTCGTGACGAGGCTGGAGACGGAAGTGGGGCCTTCCGCCCGCGCCGCCGACGCCGCGAAGGC
CGTCACCCGCCCCGTCGAACCGGGCAAGCCGGACCTCACCGCCTTGCGCAATCCGGCACGGATTACCCCCGCCATCGCCT
TCAGCCAGGCTAAGGGCTTGCTGCCGTTGCCGGTTGCTGGCGTGACGGTCAAGACCTTCGGTGCCGCCGACAGCGTGGGC
GGGGCCGAAAAGGGCATGACCATCGCCACCCGCGCCGGCGCCCCTGTCACCGCCCCGGCGGACGGCTGGGTGGTCTATGC
CGGGCCGTTCCGCAGCTACGGACAACTCTTGATCATCAACGCTGGCGGCGGCTACCATATCCTGATGGCAGGCATGGAAC
GGATCACCGTGGACCTTGGCCAGTTCGTCCTGGCGGGCGAGCCGGTGGGGGTGATGGGCGGCCTGTCGCGGACCGCGGGA
CCGGCGGCGCGCGGCGCGGCGGTACCGGCCTCAGGCCAGGCTCCGAGTCAGGCCGCAAGCCAGGCGGCAGGTCAGGCCCC
GAGCGTTGTTCAGGCAGCCGGATTACGTTTTGGCAATGAGGCTGGCACAGCCTTGGGACAGCCCCAATTGTATGTCGAGT
TCCGAAAAGACGGGATTTCGATAGATCCTACCCCGTGGTGGGCCGCAACGGACAGTCAGAAGGTACGTGGATGA

Upstream 100 bases:

>100_bases
TCGATGCGCTTTCGTCACGCGAACCGGTTTCCACTTCGCTCGAAAGCGCTTTGGCGAAGGTTAACGTTTCCTAAACCCCG
TTTCCCCGAGGATCTGGGCC

Downstream 100 bases:

>100_bases
TGCGTCGGACGTCTCTATTTCTTTTCGGCGTGGCGGCTGGCGCCCTTGTGGCCGTTGCAGCGGTTCAGCCGCGGGTGCTG
GCGCCTTTCTTCCTTGGCAC

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MTARAALLLSLALAGLLPAATAALGQAGAAPAVVPLPPVPPSRSGLDTDALKSDLRGTEEAQKRLRAELEAAKGDRGRLN
QMLVETATRTRAVEQQLIDVEGRIGMLDGSATDLNASLAKRRGVLAQVLAALMRMGREPPPALLMRPDDALDAVRSAILL
GALLPELRVEAETLAADLSELSRVRGELTAARDSLTRLKAELDDDRKRLSLLVTERQRRQAEEQPVPPAERSQAETVAKA
TGDVHDLVTRLETEVGPSARAADAAKAVTRPVEPGKPDLTALRNPARITPAIAFSQAKGLLPLPVAGVTVKTFGAADSVG
GAEKGMTIATRAGAPVTAPADGWVVYAGPFRSYGQLLIINAGGGYHILMAGMERITVDLGQFVLAGEPVGVMGGLSRTAG
PAARGAAVPASGQAPSQAASQAAGQAPSVVQAAGLRFGNEAGTALGQPQLYVEFRKDGISIDPTPWWAATDSQKVRG

Sequences:

>Translated_477_residues
MTARAALLLSLALAGLLPAATAALGQAGAAPAVVPLPPVPPSRSGLDTDALKSDLRGTEEAQKRLRAELEAAKGDRGRLN
QMLVETATRTRAVEQQLIDVEGRIGMLDGSATDLNASLAKRRGVLAQVLAALMRMGREPPPALLMRPDDALDAVRSAILL
GALLPELRVEAETLAADLSELSRVRGELTAARDSLTRLKAELDDDRKRLSLLVTERQRRQAEEQPVPPAERSQAETVAKA
TGDVHDLVTRLETEVGPSARAADAAKAVTRPVEPGKPDLTALRNPARITPAIAFSQAKGLLPLPVAGVTVKTFGAADSVG
GAEKGMTIATRAGAPVTAPADGWVVYAGPFRSYGQLLIINAGGGYHILMAGMERITVDLGQFVLAGEPVGVMGGLSRTAG
PAARGAAVPASGQAPSQAASQAAGQAPSVVQAAGLRFGNEAGTALGQPQLYVEFRKDGISIDPTPWWAATDSQKVRG
>Mature_476_residues
TARAALLLSLALAGLLPAATAALGQAGAAPAVVPLPPVPPSRSGLDTDALKSDLRGTEEAQKRLRAELEAAKGDRGRLNQ
MLVETATRTRAVEQQLIDVEGRIGMLDGSATDLNASLAKRRGVLAQVLAALMRMGREPPPALLMRPDDALDAVRSAILLG
ALLPELRVEAETLAADLSELSRVRGELTAARDSLTRLKAELDDDRKRLSLLVTERQRRQAEEQPVPPAERSQAETVAKAT
GDVHDLVTRLETEVGPSARAADAAKAVTRPVEPGKPDLTALRNPARITPAIAFSQAKGLLPLPVAGVTVKTFGAADSVGG
AEKGMTIATRAGAPVTAPADGWVVYAGPFRSYGQLLIINAGGGYHILMAGMERITVDLGQFVLAGEPVGVMGGLSRTAGP
AARGAAVPASGQAPSQAASQAAGQAPSVVQAAGLRFGNEAGTALGQPQLYVEFRKDGISIDPTPWWAATDSQKVRG

Specific function: May Be Involved In Stationary-Phase Survival. [C]

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Attached To The Inner Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 49475; Mature: 49344

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARAALLLSLALAGLLPAATAALGQAGAAPAVVPLPPVPPSRSGLDTDALKSDLRGTEE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCHH
AQKRLRAELEAAKGDRGRLNQMLVETATRTRAVEQQLIDVEGRIGMLDGSATDLNASLAK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
RRGVLAQVLAALMRMGREPPPALLMRPDDALDAVRSAILLGALLPELRVEAETLAADLSE
HCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRVRGELTAARDSLTRLKAELDDDRKRLSLLVTERQRRQAEEQPVPPAERSQAETVAKA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TGDVHDLVTRLETEVGPSARAADAAKAVTRPVEPGKPDLTALRNPARITPAIAFSQAKGL
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHCCCC
LPLPVAGVTVKTFGAADSVGGAEKGMTIATRAGAPVTAPADGWVVYAGPFRSYGQLLIIN
CCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEE
AGGGYHILMAGMERITVDLGQFVLAGEPVGVMGGLSRTAGPAARGAAVPASGQAPSQAAS
CCCCEEEEEHHHHHHHHHHHHHEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
QAAGQAPSVVQAAGLRFGNEAGTALGQPQLYVEFRKDGISIDPTPWWAATDSQKVRG
HHCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TARAALLLSLALAGLLPAATAALGQAGAAPAVVPLPPVPPSRSGLDTDALKSDLRGTEE
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCHH
AQKRLRAELEAAKGDRGRLNQMLVETATRTRAVEQQLIDVEGRIGMLDGSATDLNASLAK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
RRGVLAQVLAALMRMGREPPPALLMRPDDALDAVRSAILLGALLPELRVEAETLAADLSE
HCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRVRGELTAARDSLTRLKAELDDDRKRLSLLVTERQRRQAEEQPVPPAERSQAETVAKA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TGDVHDLVTRLETEVGPSARAADAAKAVTRPVEPGKPDLTALRNPARITPAIAFSQAKGL
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHCCCC
LPLPVAGVTVKTFGAADSVGGAEKGMTIATRAGAPVTAPADGWVVYAGPFRSYGQLLIIN
CCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEE
AGGGYHILMAGMERITVDLGQFVLAGEPVGVMGGLSRTAGPAARGAAVPASGQAPSQAAS
CCCCEEEEEHHHHHHHHHHHHHEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
QAAGQAPSVVQAAGLRFGNEAGTALGQPQLYVEFRKDGISIDPTPWWAATDSQKVRG
HHCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]