Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is qmcA [H]
Identifier: 154245824
GI number: 154245824
Start: 2118954
End: 2119958
Strand: Direct
Name: qmcA [H]
Synonym: Xaut_1880
Alternate gene names: 154245824
Gene position: 2118954-2119958 (Clockwise)
Preceding gene: 154245823
Following gene: 154245825
Centisome position: 39.91
GC content: 69.85
Gene sequence:
>1005_bases ATGCTGCTGACCGGACCGAACGTGTTCGTGCTCGTCCTGCTCGTGCTCGCAGTGGCGGTGGTCTTCTCCGGGGTGAAGAC GGTGCCGCAGGGCTACCAGTACACGGTGGAGCGCTTCCGCCGGTACACCAAGACGCTGCAGCCGGGCCTCAACCTCATCG TCCCGTTCATCGACCGCATCGGCAACAAGGTGAACGTGATGGAGCAGGTGCTCCCGGTGCCGACCCAGGAGGTCATCACC AAGGACAACGCCACCGTGGCGGTGGACGGGGTCGCCTTCTACCAGGTGTTCGACGCGGCGCGCGCGTCCTACGAGGTGGC CCGGCTCGACACCGCCATCCTGGCCCTGACCATGACCAATATCCGCACCGTCATGGGCTCCATGGACCTCGACCAGCTGC TCTCCCACCGCGACGAGATCAACGTGCGCCTGCTGCGGGTGGTGGATGCCGCCGCCTCGCCCTGGGGCATCAAGATCACC CGCGTGGAGATCAAGGACATCGTGCCGCCGGCGGACCTCGTCAACGCCATGGGCCGGCAGATGAAGGCGGAGCGCGAGAA GCGCGCCATCATCCTGGAGGCCGAGGGCCAGCGCCAGTCCGAGATCCTGAAGGCGGAGGGCCAGAAGCAGGGCCAGATCC TCCAGGCCGAGGGCCGGCGCGAGGCCGCCTTCCGCGACGCCGAGGCGCGGGAGCGCCTGGCCGAGGCCGACGCCAAGGCC ACCCAGATGCTCTCCGCCGCGGTGGAGAGCGGCGATCCGGCGGCGCTGAACTATTACATCGCCGAGAAATACGTGAAGGC GTTCGAGGCCATGGGTACCGCGCCCAACCAGAAGGTGGTGCTGGTGCCCTATGAGGGCACGGCGCTCCTGGGCTCGCTCA CCGGCATAGGCGAGATCGCCCGCGCGGCGTTCGGCGGCGAGGGGCCGGCGGGTCCCCGTCCGCCCGTTCCCGGCAGCCGG CGGCCCACCGGGCCCGCGACGGTGCCGCCCCCGAGCCACGGCTGA
Upstream 100 bases:
>100_bases CGGCCCGTCTGTTCCCGCCTGCGGTCCCGGCTCCCTTGCCGGGCCGGGCGCCCCATGCCCATATGCGCCCGGCCCCAAGG GCCAAGCGAAAGGGCGTACC
Downstream 100 bases:
>100_bases GGCGCGCCATGCTCGCCGATCTCGGACCTCTTCTGGGACCCTGGGCCTGGTTCATCCTGGGCGGGGTGCTGCTGGTGGCG GAGATCGCCGCGCCGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLLTGPNVFVLVLLVLAVAVVFSGVKTVPQGYQYTVERFRRYTKTLQPGLNLIVPFIDRIGNKVNVMEQVLPVPTQEVIT KDNATVAVDGVAFYQVFDAARASYEVARLDTAILALTMTNIRTVMGSMDLDQLLSHRDEINVRLLRVVDAAASPWGIKIT RVEIKDIVPPADLVNAMGRQMKAEREKRAIILEAEGQRQSEILKAEGQKQGQILQAEGRREAAFRDAEARERLAEADAKA TQMLSAAVESGDPAALNYYIAEKYVKAFEAMGTAPNQKVVLVPYEGTALLGSLTGIGEIARAAFGGEGPAGPRPPVPGSR RPTGPATVPPPSHG
Sequences:
>Translated_334_residues MLLTGPNVFVLVLLVLAVAVVFSGVKTVPQGYQYTVERFRRYTKTLQPGLNLIVPFIDRIGNKVNVMEQVLPVPTQEVIT KDNATVAVDGVAFYQVFDAARASYEVARLDTAILALTMTNIRTVMGSMDLDQLLSHRDEINVRLLRVVDAAASPWGIKIT RVEIKDIVPPADLVNAMGRQMKAEREKRAIILEAEGQRQSEILKAEGQKQGQILQAEGRREAAFRDAEARERLAEADAKA TQMLSAAVESGDPAALNYYIAEKYVKAFEAMGTAPNQKVVLVPYEGTALLGSLTGIGEIARAAFGGEGPAGPRPPVPGSR RPTGPATVPPPSHG >Mature_334_residues MLLTGPNVFVLVLLVLAVAVVFSGVKTVPQGYQYTVERFRRYTKTLQPGLNLIVPFIDRIGNKVNVMEQVLPVPTQEVIT KDNATVAVDGVAFYQVFDAARASYEVARLDTAILALTMTNIRTVMGSMDLDQLLSHRDEINVRLLRVVDAAASPWGIKIT RVEIKDIVPPADLVNAMGRQMKAEREKRAIILEAEGQRQSEILKAEGQKQGQILQAEGRREAAFRDAEARERLAEADAKA TQMLSAAVESGDPAALNYYIAEKYVKAFEAMGTAPNQKVVLVPYEGTALLGSLTGIGEIARAAFGGEGPAGPRPPVPGSR RPTGPATVPPPSHG
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family [H]
Homologues:
Organism=Homo sapiens, GI7305503, Length=298, Percent_Identity=36.241610738255, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI21686995, Length=191, Percent_Identity=34.5549738219895, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI221316744, Length=191, Percent_Identity=34.5549738219895, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI38016911, Length=182, Percent_Identity=33.5164835164835, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI7657615, Length=197, Percent_Identity=24.8730964467005, Blast_Score=82, Evalue=8e-16, Organism=Escherichia coli, GI1786697, Length=294, Percent_Identity=62.2448979591837, Blast_Score=401, Evalue=1e-113, Organism=Caenorhabditis elegans, GI32564147, Length=264, Percent_Identity=37.5, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17569493, Length=190, Percent_Identity=33.1578947368421, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI193209764, Length=190, Percent_Identity=33.1578947368421, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17569497, Length=204, Percent_Identity=32.843137254902, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI25153583, Length=158, Percent_Identity=37.3417721518987, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71987621, Length=158, Percent_Identity=37.3417721518987, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71987612, Length=158, Percent_Identity=37.3417721518987, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71989955, Length=162, Percent_Identity=34.5679012345679, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71989948, Length=162, Percent_Identity=34.5679012345679, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17570459, Length=204, Percent_Identity=31.3725490196078, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17569499, Length=192, Percent_Identity=31.25, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32566490, Length=155, Percent_Identity=36.1290322580645, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17570161, Length=161, Percent_Identity=35.4037267080745, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193210507, Length=161, Percent_Identity=35.4037267080745, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI45550506, Length=263, Percent_Identity=36.8821292775665, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI21356845, Length=201, Percent_Identity=30.3482587064677, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI18860517, Length=192, Percent_Identity=31.7708333333333, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI45556022, Length=201, Percent_Identity=32.8358208955224, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI281361633, Length=199, Percent_Identity=28.643216080402, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI281361631, Length=199, Percent_Identity=28.643216080402, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI28573263, Length=198, Percent_Identity=27.7777777777778, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI281365664, Length=155, Percent_Identity=40, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI24657857, Length=204, Percent_Identity=36.7647058823529, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI62484448, Length=155, Percent_Identity=40, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI62484274, Length=155, Percent_Identity=40, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI281361635, Length=128, Percent_Identity=29.6875, Blast_Score=72, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR018080 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 36111; Mature: 36111
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTGPNVFVLVLLVLAVAVVFSGVKTVPQGYQYTVERFRRYTKTLQPGLNLIVPFIDRI CEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHC GNKVNVMEQVLPVPTQEVITKDNATVAVDGVAFYQVFDAARASYEVARLDTAILALTMTN CCHHHHHHHHCCCCCHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRTVMGSMDLDQLLSHRDEINVRLLRVVDAAASPWGIKITRVEIKDIVPPADLVNAMGRQ HHHHHCCCCHHHHHCCCHHCCHHHEEEHHHCCCCCCEEEEEEEHHHCCCCHHHHHHHHHH MKAEREKRAIILEAEGQRQSEILKAEGQKQGQILQAEGRREAAFRDAEARERLAEADAKA HHHHHHHCEEEEECCCCHHHHHHHHCCCCCCCEEECCCCHHHHHCCHHHHHHHHHHHHHH TQMLSAAVESGDPAALNYYIAEKYVKAFEAMGTAPNQKVVLVPYEGTALLGSLTGIGEIA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH RAAFGGEGPAGPRPPVPGSRRPTGPATVPPPSHG HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLTGPNVFVLVLLVLAVAVVFSGVKTVPQGYQYTVERFRRYTKTLQPGLNLIVPFIDRI CEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHC GNKVNVMEQVLPVPTQEVITKDNATVAVDGVAFYQVFDAARASYEVARLDTAILALTMTN CCHHHHHHHHCCCCCHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRTVMGSMDLDQLLSHRDEINVRLLRVVDAAASPWGIKITRVEIKDIVPPADLVNAMGRQ HHHHHCCCCHHHHHCCCHHCCHHHEEEHHHCCCCCCEEEEEEEHHHCCCCHHHHHHHHHH MKAEREKRAIILEAEGQRQSEILKAEGQKQGQILQAEGRREAAFRDAEARERLAEADAKA HHHHHHHCEEEEECCCCHHHHHHHHCCCCCCCEEECCCCHHHHHCCHHHHHHHHHHHHHH TQMLSAAVESGDPAALNYYIAEKYVKAFEAMGTAPNQKVVLVPYEGTALLGSLTGIGEIA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH RAAFGGEGPAGPRPPVPGSRRPTGPATVPPPSHG HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]