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The map label for this gene is ybbJ [H]

Identifier: 154245825

GI number: 154245825

Start: 2119967

End: 2120419

Strand: Direct

Name: ybbJ [H]

Synonym: Xaut_1881

Alternate gene names: 154245825

Gene position: 2119967-2120419 (Clockwise)

Preceding gene: 154245824

Following gene: 154245829

Centisome position: 39.93

GC content: 71.74

Gene sequence:

>453_bases
ATGCTCGCCGATCTCGGACCTCTTCTGGGACCCTGGGCCTGGTTCATCCTGGGCGGGGTGCTGCTGGTGGCGGAGATCGC
CGCGCCGGGCGCCTTCCTGCTCTGGCTGGGCCTCGCGGCGCTCGTCACCGGCGCCCTGTCCTATGTGGTGGGCCTCACCT
GGCAGAGCGAAGTGCTGGCGTTCGCGGCGCTGGCGGTGATCGCGGTGCTTATCGGCCGCAGGATCAGCCCGGCGCCGGGG
CGCGCCTCGGACAGGCCGTTCCTCAACCGGCGGTCGGAAGGCTTCGTCGGGCGGGTGTTCACGCTGGACGAGCCCATCCT
CGGCGGCGTCGGCCGGGTGCGGATCGACGACACGGTCTGGCGCATCGAAGGACCGGACCTTGCCGCCGGCCGGGACGTGA
AGGTGATCGCGGCCGATGGCGCCACCCTGAAGGTGGAAGCGGTGGAGGGCTGA

Upstream 100 bases:

>100_bases
GCGGCGAGGGGCCGGCGGGTCCCCGTCCGCCCGTTCCCGGCAGCCGGCGGCCCACCGGGCCCGCGACGGTGCCGCCCCCG
AGCCACGGCTGAGGCGCGCC

Downstream 100 bases:

>100_bases
GCGGCCTTCTGGAACGTCAAAGCGGCGCTGCCGCGCTGACCCCGTCATGGCCGGGCTTGTTGCGACCATCATGGCCGACA
TCATGGCCGAACCGCTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLADLGPLLGPWAWFILGGVLLVAEIAAPGAFLLWLGLAALVTGALSYVVGLTWQSEVLAFAALAVIAVLIGRRISPAPG
RASDRPFLNRRSEGFVGRVFTLDEPILGGVGRVRIDDTVWRIEGPDLAAGRDVKVIAADGATLKVEAVEG

Sequences:

>Translated_150_residues
MLADLGPLLGPWAWFILGGVLLVAEIAAPGAFLLWLGLAALVTGALSYVVGLTWQSEVLAFAALAVIAVLIGRRISPAPG
RASDRPFLNRRSEGFVGRVFTLDEPILGGVGRVRIDDTVWRIEGPDLAAGRDVKVIAADGATLKVEAVEG
>Mature_150_residues
MLADLGPLLGPWAWFILGGVLLVAEIAAPGAFLLWLGLAALVTGALSYVVGLTWQSEVLAFAALAVIAVLIGRRISPAPG
RASDRPFLNRRSEGFVGRVFTLDEPILGGVGRVRIDDTVWRIEGPDLAAGRDVKVIAADGATLKVEAVEG

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=130, Percent_Identity=35.3846153846154, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 15727; Mature: 15727

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADLGPLLGPWAWFILGGVLLVAEIAAPGAFLLWLGLAALVTGALSYVVGLTWQSEVLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FAALAVIAVLIGRRISPAPGRASDRPFLNRRSEGFVGRVFTLDEPILGGVGRVRIDDTVW
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCEEE
RIEGPDLAAGRDVKVIAADGATLKVEAVEG
EECCCCCCCCCCEEEEEECCCEEEEEEECC
>Mature Secondary Structure
MLADLGPLLGPWAWFILGGVLLVAEIAAPGAFLLWLGLAALVTGALSYVVGLTWQSEVLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FAALAVIAVLIGRRISPAPGRASDRPFLNRRSEGFVGRVFTLDEPILGGVGRVRIDDTVW
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCEEE
RIEGPDLAAGRDVKVIAADGATLKVEAVEG
EECCCCCCCCCCEEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]