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The map label for this gene is gidB

Identifier: 154245779

GI number: 154245779

Start: 2063749

End: 2064486

Strand: Direct

Name: gidB

Synonym: Xaut_1835

Alternate gene names: 154245779

Gene position: 2063749-2064486 (Clockwise)

Preceding gene: 154245778

Following gene: 154245780

Centisome position: 38.87

GC content: 69.11

Gene sequence:

>738_bases
ATGAAGGGCGGCAAGCGGGAGAACGGTAGCGCCGGACGCGAGGCCATCGCGGCGGTGGTTTCACGTGAAACACTGGGCCG
GCTCACCACCATCGCCGATCTGCTGGTGAAGTGGCAGAAGACCATCAATCTCGTCGCCCCTGCCACCCTGCCCGACCTGT
GGGCGCGGCACGTGGGTGATTCGCTCCAGCTCGTTCACCATGTGCCGCAGACCCCCTTGCGCTGGGTGGATCTGGGGTCC
GGCGGCGGTTTTCCCGGCCTTGTGGTGGCTGCTGTGCTGGCGGAGCGCGACGGCGCCCACATGCATCTTGTGGAAAGCGA
TACCCGCAAGGCCGCCTTCCTGCGGGAGGCGGCCCGGCTGGCGCAACTGCCTGTCACCGTTCACGCCGCGCGCATCGAGC
AGGTGGCGCAAGCGCTGGCACCGGGGACCCATGTGGTCTCCGCCCGCGCCCTGGCGCCTTTGCCGAAGCTGCTGGATCTG
GCCGCGCCCTTCCTCGCCGCAGGGGCCATTGGCCTATTTCCCAAGGGCCGGGATGCGGAACGCGAATTGACCGATGCGGC
AAGAAGCTGGACACTCGACTGTGACCTGCGCCCCAGTACGAGCGATCCCGAAGGCCGGATCCTCCTGGTAAGGGGTGCCA
GGCGCGGGACCGACACCATCGAACCCCAGTCCGGCGCGCGCTCCCCTGGGGAGCCGGACGCCGGTGGCGGGCCGCCCGAA
GCGACGCGTCGAGGATGA

Upstream 100 bases:

>100_bases
CTCGCCCTGCTCGCCACCCATGCTCGGCGGGCCGGGGCGGGCTGTTGATGGCGTGCCTGTGGATCATGGGGATGATGGCC
CTGCCGGAGCGAGGGACCCG

Downstream 100 bases:

>100_bases
AGGCGCCATGATCGATCAAGAGACCCCGTCCCCCGCTGGTGGCACCCCCGCCGCGCCGCGCGTGCTTGCCCTCGCCAACC
AGAAGGGCGGTGTGGGCAAG

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKGGKRENGSAGREAIAAVVSRETLGRLTTIADLLVKWQKTINLVAPATLPDLWARHVGDSLQLVHHVPQTPLRWVDLGS
GGGFPGLVVAAVLAERDGAHMHLVESDTRKAAFLREAARLAQLPVTVHAARIEQVAQALAPGTHVVSARALAPLPKLLDL
AAPFLAAGAIGLFPKGRDAERELTDAARSWTLDCDLRPSTSDPEGRILLVRGARRGTDTIEPQSGARSPGEPDAGGGPPE
ATRRG

Sequences:

>Translated_245_residues
MKGGKRENGSAGREAIAAVVSRETLGRLTTIADLLVKWQKTINLVAPATLPDLWARHVGDSLQLVHHVPQTPLRWVDLGS
GGGFPGLVVAAVLAERDGAHMHLVESDTRKAAFLREAARLAQLPVTVHAARIEQVAQALAPGTHVVSARALAPLPKLLDL
AAPFLAAGAIGLFPKGRDAERELTDAARSWTLDCDLRPSTSDPEGRILLVRGARRGTDTIEPQSGARSPGEPDAGGGPPE
ATRRG
>Mature_245_residues
MKGGKRENGSAGREAIAAVVSRETLGRLTTIADLLVKWQKTINLVAPATLPDLWARHVGDSLQLVHHVPQTPLRWVDLGS
GGGFPGLVVAAVLAERDGAHMHLVESDTRKAAFLREAARLAQLPVTVHAARIEQVAQALAPGTHVVSARALAPLPKLLDL
AAPFLAAGAIGLFPKGRDAERELTDAARSWTLDCDLRPSTSDPEGRILLVRGARRGTDTIEPQSGARSPGEPDAGGGPPE
ATRRG

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: =2.1.1.170 [H]

Molecular weight: Translated: 25832; Mature: 25832

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGGKRENGSAGREAIAAVVSRETLGRLTTIADLLVKWQKTINLVAPATLPDLWARHVGD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
SLQLVHHVPQTPLRWVDLGSGGGFPGLVVAAVLAERDGAHMHLVESDTRKAAFLREAARL
HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
AQLPVTVHAARIEQVAQALAPGTHVVSARALAPLPKLLDLAAPFLAAGAIGLFPKGRDAE
HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
RELTDAARSWTLDCDLRPSTSDPEGRILLVRGARRGTDTIEPQSGARSPGEPDAGGGPPE
HHHHHHHHHEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATRRG
CCCCC
>Mature Secondary Structure
MKGGKRENGSAGREAIAAVVSRETLGRLTTIADLLVKWQKTINLVAPATLPDLWARHVGD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
SLQLVHHVPQTPLRWVDLGSGGGFPGLVVAAVLAERDGAHMHLVESDTRKAAFLREAARL
HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
AQLPVTVHAARIEQVAQALAPGTHVVSARALAPLPKLLDLAAPFLAAGAIGLFPKGRDAE
HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
RELTDAARSWTLDCDLRPSTSDPEGRILLVRGARRGTDTIEPQSGARSPGEPDAGGGPPE
HHHHHHHHHEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATRRG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA