Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is mnmG [H]

Identifier: 154245778

GI number: 154245778

Start: 2061816

End: 2063696

Strand: Direct

Name: mnmG [H]

Synonym: Xaut_1834

Alternate gene names: 154245778

Gene position: 2061816-2063696 (Clockwise)

Preceding gene: 154245777

Following gene: 154245779

Centisome position: 38.84

GC content: 69.59

Gene sequence:

>1881_bases
ATGAGAATGACCGAAACCCTTTCAGCAAATGCCTTCGACGTGATCGTGGTGGGCGGTGGCCATGCGGGGTGCGAGGCCGC
CGCTGCGTCTGCGCGCACCGGCGCGCGCACGGCGCTGCTGACCCATTCCCGTTCAACCATTGGCGCCATGTCCTGCAATC
CCGCCATCGGCGGGCTGGGCAAGGGCCATCTGGTGCGGGAGATCGATGCGCTGGACGGCCTCATGGGCCGGGTGGCGGAC
CAGGGGGGCATCCAGTTCCGCGTGCTCAACCGCCGCAAGGGTCCCGCCGTGCGGGGGCCCCGCGCCCAGGCCGACCGCAA
GCTCTACGCCCCCGCCATGCAGGCGGCGCTGGCCGCGCAGGATGGTCTCACCATTGTCGAAGGCGAGGCGGATGACCTGC
TGGTGGCGGGCGGCGGCATCGCCGGCGTGCGTCTCGCCGATGGGCGCGAGCTGTCCTGCGGCGCCGTGGTGCTCACCACC
GGCACCTTTCTCAACGGACTCATCCATATGGGCGAGGTGAGCTATCCCGCCGGGCGCATGGGCGAGAAGCCGGCGCTGGG
CCTCTCCCCTGCCCTCGCCCGCCTCGGCTTCTCTTTGGGTCGGCTTAAGACCGGCACGCCCGCGCGCCTCGATGGTCGGA
CCATCGATTGGGCGAGCCTGGAGATGCAGCCCGGCGATGATCGGCCCGAGCCGTTCTCGGCCCTCACCACTTTTCTGCCC
AACCGCCAGGTGGAATGCGGCATCACCCGCACCACGGATGCGACCCACGAGCTGATCCGCGCCAACCTTAGCCGCTCGGC
CATGTATTCCGGCCGGATCGAGAGCAGCGGCCCGCGCTATTGCCCGTCCATCGAGGACAAGATCGTCCGCTTCGGCGATC
GCGACGGCCACCAGATCTTTTTGGAGCCGGAGGGGCTGGACGATCCCACAATCTATCCCAACGGCCTGTCCACCTCCCTG
CCCGCCGAGGTGCAGACCGCCTTCCTGCGCACGATTCCGGGGCTGGAACAGGTGGCGGTGCTGCGGCCGGGCTATGCCAT
CGAATACGACCATGTGGACCCGCGCGAGCTTGCCCCCACGCTGGAAGCCAAGCGCGTGGCCGGGCTGTTCCTCGCCGGCC
AGATCAACGGCACTACCGGCTATGAGGAAGCCGCGGCCCAGGGGCTGCTCGCTGGCCTCAATGCGGCGCGGCGCGCCGGC
GGGGCGGACGGAACGGTGTTCGATCGGGCGGAAGCCTATCTTGGGGTGATGGTGGACGATCTCGTCACCCGCGGGGTGAG
CGAGCCCTACCGCATGTTCACCTCGCGCGCCGAATATCGCCTGACCCTTCGCGCCGACAATGCGGACCAGCGCCTCACCC
GGCACGGCGAAGCGCTCGGCCTCGTGGGCGCCGAGCGGTCCGCCCATTTCGCCCGGCGCAGCGCGGCGTTGGAAGAGGCG
CGGGCGCTGGCGGAAAGCCTCAGCCTGACGCCCACGGAAGGCGCGCGGCACGGCCTCAGCGTCAATCGCGACGGGCAGCG
GCGCACGGCCTTCGATCTTCTCGCTTATCCGGACATCGACATGGTCCGCCTCGGTGCCATCTGGCCGCAACTGGCGGGGC
TCGATCCGGCGGTGGCGGAGCAGGTGGAGATTGATGCCAAATACGCCGTCTATCTCCACCGGCAGGCGGCGGACATTTCC
ATGCTGCGTCGGGACGAGCAATTGAGCCTGCCGGAAGACCTGTCCTATGCCGACCTGCCGGGCCTCTCCAACGAGCTGAA
GCAGAAGCTCGCCCGCATCCGCCCGCGCACGGTGGGGCAGGCCGGGCGCATGGAGGGAATGACCCCGGCGGCCCTCGCCC
TGCTCGCCACCCATGCTCGGCGGGCCGGGGCGGGCTGTTGA

Upstream 100 bases:

>100_bases
CGCAGGATGTTTCACGTGAAACATCGCCGGCTGCGGCCTTGACGGCGCCGGAAAGAGGGCGTTTCCAGAAGGGGCGGCAC
GGACCGCCTTTCTGCCCCGG

Downstream 100 bases:

>100_bases
TGGCGTGCCTGTGGATCATGGGGATGATGGCCCTGCCGGAGCGAGGGACCCGATGAAGGGCGGCAAGCGGGAGAACGGTA
GCGCCGGACGCGAGGCCATC

Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A [H]

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MRMTETLSANAFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLGKGHLVREIDALDGLMGRVAD
QGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQDGLTIVEGEADDLLVAGGGIAGVRLADGRELSCGAVVLTT
GTFLNGLIHMGEVSYPAGRMGEKPALGLSPALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLP
NRQVECGITRTTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDPTIYPNGLSTSL
PAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPTLEAKRVAGLFLAGQINGTTGYEEAAAQGLLAGLNAARRAG
GADGTVFDRAEAYLGVMVDDLVTRGVSEPYRMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEA
RALAESLSLTPTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAEQVEIDAKYAVYLHRQAADIS
MLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQAGRMEGMTPAALALLATHARRAGAGC

Sequences:

>Translated_626_residues
MRMTETLSANAFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLGKGHLVREIDALDGLMGRVAD
QGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQDGLTIVEGEADDLLVAGGGIAGVRLADGRELSCGAVVLTT
GTFLNGLIHMGEVSYPAGRMGEKPALGLSPALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLP
NRQVECGITRTTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDPTIYPNGLSTSL
PAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPTLEAKRVAGLFLAGQINGTTGYEEAAAQGLLAGLNAARRAG
GADGTVFDRAEAYLGVMVDDLVTRGVSEPYRMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEA
RALAESLSLTPTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAEQVEIDAKYAVYLHRQAADIS
MLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQAGRMEGMTPAALALLATHARRAGAGC
>Mature_626_residues
MRMTETLSANAFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLGKGHLVREIDALDGLMGRVAD
QGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQDGLTIVEGEADDLLVAGGGIAGVRLADGRELSCGAVVLTT
GTFLNGLIHMGEVSYPAGRMGEKPALGLSPALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLP
NRQVECGITRTTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDPTIYPNGLSTSL
PAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPTLEAKRVAGLFLAGQINGTTGYEEAAAQGLLAGLNAARRAG
GADGTVFDRAEAYLGVMVDDLVTRGVSEPYRMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEA
RALAESLSLTPTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAEQVEIDAKYAVYLHRQAADIS
MLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQAGRMEGMTPAALALLATHARRAGAGC

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family [H]

Homologues:

Organism=Homo sapiens, GI74024895, Length=638, Percent_Identity=45.9247648902821, Blast_Score=526, Evalue=1e-149,
Organism=Homo sapiens, GI19882217, Length=663, Percent_Identity=44.1930618401207, Blast_Score=513, Evalue=1e-145,
Organism=Homo sapiens, GI183227703, Length=678, Percent_Identity=43.2153392330383, Blast_Score=507, Evalue=1e-143,
Organism=Escherichia coli, GI2367273, Length=623, Percent_Identity=52.3274478330658, Blast_Score=608, Evalue=1e-175,
Organism=Caenorhabditis elegans, GI17534255, Length=615, Percent_Identity=43.5772357723577, Blast_Score=508, Evalue=1e-144,
Organism=Saccharomyces cerevisiae, GI6321202, Length=632, Percent_Identity=46.9936708860759, Blast_Score=570, Evalue=1e-163,
Organism=Drosophila melanogaster, GI24658174, Length=644, Percent_Identity=46.8944099378882, Blast_Score=538, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595 [H]

Pfam domain/function: PF01134 GIDA [H]

EC number: NA

Molecular weight: Translated: 66657; Mature: 66657

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMTETLSANAFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLG
CCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCCC
KGHLVREIDALDGLMGRVADQGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQ
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHC
DGLTIVEGEADDLLVAGGGIAGVRLADGRELSCGAVVLTTGTFLNGLIHMGEVSYPAGRM
CCCEEEECCCCCEEEECCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCC
GEKPALGLSPALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLP
CCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHCC
NRQVECGITRTTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIF
CCCEEECEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEE
LEPEGLDDPTIYPNGLSTSLPAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPT
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHEECCCCEEEECCCCHHHHCCH
LEAKRVAGLFLAGQINGTTGYEEAAAQGLLAGLNAARRAGGADGTVFDRAEAYLGVMVDD
HHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LVTRGVSEPYRMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEA
HHHHCCCHHHHHHHCCCEEEEEEEECCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH
RALAESLSLTPTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAE
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHCCCCHHHHH
QVEIDAKYAVYLHRQAADISMLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQ
HHCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
AGRMEGMTPAALALLATHARRAGAGC
CCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRMTETLSANAFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLG
CCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCCC
KGHLVREIDALDGLMGRVADQGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQ
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHC
DGLTIVEGEADDLLVAGGGIAGVRLADGRELSCGAVVLTTGTFLNGLIHMGEVSYPAGRM
CCCEEEECCCCCEEEECCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCC
GEKPALGLSPALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLP
CCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHCC
NRQVECGITRTTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIF
CCCEEECEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEE
LEPEGLDDPTIYPNGLSTSLPAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPT
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHEECCCCEEEECCCCHHHHCCH
LEAKRVAGLFLAGQINGTTGYEEAAAQGLLAGLNAARRAGGADGTVFDRAEAYLGVMVDD
HHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LVTRGVSEPYRMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEA
HHHHCCCHHHHHHHCCCEEEEEEEECCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH
RALAESLSLTPTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAE
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHCCCCHHHHH
QVEIDAKYAVYLHRQAADISMLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQ
HHCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
AGRMEGMTPAALALLATHARRAGAGC
CCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA