Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is mnmG [H]
Identifier: 154245778
GI number: 154245778
Start: 2061816
End: 2063696
Strand: Direct
Name: mnmG [H]
Synonym: Xaut_1834
Alternate gene names: 154245778
Gene position: 2061816-2063696 (Clockwise)
Preceding gene: 154245777
Following gene: 154245779
Centisome position: 38.84
GC content: 69.59
Gene sequence:
>1881_bases ATGAGAATGACCGAAACCCTTTCAGCAAATGCCTTCGACGTGATCGTGGTGGGCGGTGGCCATGCGGGGTGCGAGGCCGC CGCTGCGTCTGCGCGCACCGGCGCGCGCACGGCGCTGCTGACCCATTCCCGTTCAACCATTGGCGCCATGTCCTGCAATC CCGCCATCGGCGGGCTGGGCAAGGGCCATCTGGTGCGGGAGATCGATGCGCTGGACGGCCTCATGGGCCGGGTGGCGGAC CAGGGGGGCATCCAGTTCCGCGTGCTCAACCGCCGCAAGGGTCCCGCCGTGCGGGGGCCCCGCGCCCAGGCCGACCGCAA GCTCTACGCCCCCGCCATGCAGGCGGCGCTGGCCGCGCAGGATGGTCTCACCATTGTCGAAGGCGAGGCGGATGACCTGC TGGTGGCGGGCGGCGGCATCGCCGGCGTGCGTCTCGCCGATGGGCGCGAGCTGTCCTGCGGCGCCGTGGTGCTCACCACC GGCACCTTTCTCAACGGACTCATCCATATGGGCGAGGTGAGCTATCCCGCCGGGCGCATGGGCGAGAAGCCGGCGCTGGG CCTCTCCCCTGCCCTCGCCCGCCTCGGCTTCTCTTTGGGTCGGCTTAAGACCGGCACGCCCGCGCGCCTCGATGGTCGGA CCATCGATTGGGCGAGCCTGGAGATGCAGCCCGGCGATGATCGGCCCGAGCCGTTCTCGGCCCTCACCACTTTTCTGCCC AACCGCCAGGTGGAATGCGGCATCACCCGCACCACGGATGCGACCCACGAGCTGATCCGCGCCAACCTTAGCCGCTCGGC CATGTATTCCGGCCGGATCGAGAGCAGCGGCCCGCGCTATTGCCCGTCCATCGAGGACAAGATCGTCCGCTTCGGCGATC GCGACGGCCACCAGATCTTTTTGGAGCCGGAGGGGCTGGACGATCCCACAATCTATCCCAACGGCCTGTCCACCTCCCTG CCCGCCGAGGTGCAGACCGCCTTCCTGCGCACGATTCCGGGGCTGGAACAGGTGGCGGTGCTGCGGCCGGGCTATGCCAT CGAATACGACCATGTGGACCCGCGCGAGCTTGCCCCCACGCTGGAAGCCAAGCGCGTGGCCGGGCTGTTCCTCGCCGGCC AGATCAACGGCACTACCGGCTATGAGGAAGCCGCGGCCCAGGGGCTGCTCGCTGGCCTCAATGCGGCGCGGCGCGCCGGC GGGGCGGACGGAACGGTGTTCGATCGGGCGGAAGCCTATCTTGGGGTGATGGTGGACGATCTCGTCACCCGCGGGGTGAG CGAGCCCTACCGCATGTTCACCTCGCGCGCCGAATATCGCCTGACCCTTCGCGCCGACAATGCGGACCAGCGCCTCACCC GGCACGGCGAAGCGCTCGGCCTCGTGGGCGCCGAGCGGTCCGCCCATTTCGCCCGGCGCAGCGCGGCGTTGGAAGAGGCG CGGGCGCTGGCGGAAAGCCTCAGCCTGACGCCCACGGAAGGCGCGCGGCACGGCCTCAGCGTCAATCGCGACGGGCAGCG GCGCACGGCCTTCGATCTTCTCGCTTATCCGGACATCGACATGGTCCGCCTCGGTGCCATCTGGCCGCAACTGGCGGGGC TCGATCCGGCGGTGGCGGAGCAGGTGGAGATTGATGCCAAATACGCCGTCTATCTCCACCGGCAGGCGGCGGACATTTCC ATGCTGCGTCGGGACGAGCAATTGAGCCTGCCGGAAGACCTGTCCTATGCCGACCTGCCGGGCCTCTCCAACGAGCTGAA GCAGAAGCTCGCCCGCATCCGCCCGCGCACGGTGGGGCAGGCCGGGCGCATGGAGGGAATGACCCCGGCGGCCCTCGCCC TGCTCGCCACCCATGCTCGGCGGGCCGGGGCGGGCTGTTGA
Upstream 100 bases:
>100_bases CGCAGGATGTTTCACGTGAAACATCGCCGGCTGCGGCCTTGACGGCGCCGGAAAGAGGGCGTTTCCAGAAGGGGCGGCAC GGACCGCCTTTCTGCCCCGG
Downstream 100 bases:
>100_bases TGGCGTGCCTGTGGATCATGGGGATGATGGCCCTGCCGGAGCGAGGGACCCGATGAAGGGCGGCAAGCGGGAGAACGGTA GCGCCGGACGCGAGGCCATC
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MRMTETLSANAFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLGKGHLVREIDALDGLMGRVAD QGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQDGLTIVEGEADDLLVAGGGIAGVRLADGRELSCGAVVLTT GTFLNGLIHMGEVSYPAGRMGEKPALGLSPALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLP NRQVECGITRTTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDPTIYPNGLSTSL PAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPTLEAKRVAGLFLAGQINGTTGYEEAAAQGLLAGLNAARRAG GADGTVFDRAEAYLGVMVDDLVTRGVSEPYRMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEA RALAESLSLTPTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAEQVEIDAKYAVYLHRQAADIS MLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQAGRMEGMTPAALALLATHARRAGAGC
Sequences:
>Translated_626_residues MRMTETLSANAFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLGKGHLVREIDALDGLMGRVAD QGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQDGLTIVEGEADDLLVAGGGIAGVRLADGRELSCGAVVLTT GTFLNGLIHMGEVSYPAGRMGEKPALGLSPALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLP NRQVECGITRTTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDPTIYPNGLSTSL PAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPTLEAKRVAGLFLAGQINGTTGYEEAAAQGLLAGLNAARRAG GADGTVFDRAEAYLGVMVDDLVTRGVSEPYRMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEA RALAESLSLTPTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAEQVEIDAKYAVYLHRQAADIS MLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQAGRMEGMTPAALALLATHARRAGAGC >Mature_626_residues MRMTETLSANAFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLGKGHLVREIDALDGLMGRVAD QGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQDGLTIVEGEADDLLVAGGGIAGVRLADGRELSCGAVVLTT GTFLNGLIHMGEVSYPAGRMGEKPALGLSPALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLP NRQVECGITRTTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDPTIYPNGLSTSL PAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPTLEAKRVAGLFLAGQINGTTGYEEAAAQGLLAGLNAARRAG GADGTVFDRAEAYLGVMVDDLVTRGVSEPYRMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEA RALAESLSLTPTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAEQVEIDAKYAVYLHRQAADIS MLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQAGRMEGMTPAALALLATHARRAGAGC
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=638, Percent_Identity=45.9247648902821, Blast_Score=526, Evalue=1e-149, Organism=Homo sapiens, GI19882217, Length=663, Percent_Identity=44.1930618401207, Blast_Score=513, Evalue=1e-145, Organism=Homo sapiens, GI183227703, Length=678, Percent_Identity=43.2153392330383, Blast_Score=507, Evalue=1e-143, Organism=Escherichia coli, GI2367273, Length=623, Percent_Identity=52.3274478330658, Blast_Score=608, Evalue=1e-175, Organism=Caenorhabditis elegans, GI17534255, Length=615, Percent_Identity=43.5772357723577, Blast_Score=508, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6321202, Length=632, Percent_Identity=46.9936708860759, Blast_Score=570, Evalue=1e-163, Organism=Drosophila melanogaster, GI24658174, Length=644, Percent_Identity=46.8944099378882, Blast_Score=538, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 66657; Mature: 66657
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTETLSANAFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLG CCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCCC KGHLVREIDALDGLMGRVADQGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQ CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHC DGLTIVEGEADDLLVAGGGIAGVRLADGRELSCGAVVLTTGTFLNGLIHMGEVSYPAGRM CCCEEEECCCCCEEEECCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCC GEKPALGLSPALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLP CCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHCC NRQVECGITRTTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIF CCCEEECEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEE LEPEGLDDPTIYPNGLSTSLPAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPT ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHEECCCCEEEECCCCHHHHCCH LEAKRVAGLFLAGQINGTTGYEEAAAQGLLAGLNAARRAGGADGTVFDRAEAYLGVMVDD HHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LVTRGVSEPYRMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEA HHHHCCCHHHHHHHCCCEEEEEEEECCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH RALAESLSLTPTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAE HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHCCCCHHHHH QVEIDAKYAVYLHRQAADISMLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQ HHCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC AGRMEGMTPAALALLATHARRAGAGC CCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRMTETLSANAFDVIVVGGGHAGCEAAAASARTGARTALLTHSRSTIGAMSCNPAIGGLG CCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCCC KGHLVREIDALDGLMGRVADQGGIQFRVLNRRKGPAVRGPRAQADRKLYAPAMQAALAAQ CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHC DGLTIVEGEADDLLVAGGGIAGVRLADGRELSCGAVVLTTGTFLNGLIHMGEVSYPAGRM CCCEEEECCCCCEEEECCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCC GEKPALGLSPALARLGFSLGRLKTGTPARLDGRTIDWASLEMQPGDDRPEPFSALTTFLP CCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHCC NRQVECGITRTTDATHELIRANLSRSAMYSGRIESSGPRYCPSIEDKIVRFGDRDGHQIF CCCEEECEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEE LEPEGLDDPTIYPNGLSTSLPAEVQTAFLRTIPGLEQVAVLRPGYAIEYDHVDPRELAPT ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHEECCCCEEEECCCCHHHHCCH LEAKRVAGLFLAGQINGTTGYEEAAAQGLLAGLNAARRAGGADGTVFDRAEAYLGVMVDD HHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LVTRGVSEPYRMFTSRAEYRLTLRADNADQRLTRHGEALGLVGAERSAHFARRSAALEEA HHHHCCCHHHHHHHCCCEEEEEEEECCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH RALAESLSLTPTEGARHGLSVNRDGQRRTAFDLLAYPDIDMVRLGAIWPQLAGLDPAVAE HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHCCCCHHHHH QVEIDAKYAVYLHRQAADISMLRRDEQLSLPEDLSYADLPGLSNELKQKLARIRPRTVGQ HHCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC AGRMEGMTPAALALLATHARRAGAGC CCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA