Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is yhfK [C]
Identifier: 154244430
GI number: 154244430
Start: 517579
End: 519873
Strand: Reverse
Name: yhfK [C]
Synonym: Xaut_0473
Alternate gene names: 154244430
Gene position: 519873-517579 (Counterclockwise)
Preceding gene: 154244433
Following gene: 154244428
Centisome position: 9.79
GC content: 71.07
Gene sequence:
>2295_bases ATGCCCGAGACGTCGCGCCGCCCCGGACCCGACCCCATGTCGCCCCCACTGTCATCTCCTGTTCCATTATCCCCGCCCCA CCCCCGCAAGCCGCTCCTCGACCGGCTGAAGGGGTGGCTCGCCGACCATGATCCCGGCGGGGTCGATCTCACGCGGGCGT TCCATCTCGGTGTTTCGTTCGTGATCGTCATCCTGGTGGGCTACGCGACCTCCACCGGGTTCCGGCTGAACATGGATGTC ACCTTTCCCATGATGGCCGGCTGTGCCGCGCTGGTGATGATCAGCTTCAATCCGGCGGCGAGCGTCGCTGCCGAGGCGCG CACCATGGGGCGCCTGTTCGCCCTCGGCTTCGTCTTCCTGCTGGCGGTGACGCTGGTGGGCCCCGGCGAGGGGCCGGGCA ACGACATCGTCCAGAAGCTGCTGCTCGTCCCCCTCGCCTTCTTCGCCCTGGCACTGCGGCGCTATGGCATGGACGGGCAG AGGCTCGGCCTCGCTCTCATCGTCGTCGCCACGGTGGGCACCATCCTCAGGCCGACGCGGTTCGAGGGGGCGCTGCTGCT CGCCGCCTTCTGCCAGGGCGCGCTGGTGGCGGCGGCGGTGCGCCTGTCCCCCTGGCGCCCCTCCGCCGTCAATGCCTTCG TCGAAACCACACTCGACATGCAGGGCGCGGTGGCGACCTATCTGCGCGAACTGTCCGAGGCGGTGCGCCACGGCCGGCAT TTCCCGGAAGAGGCCAATGACGCGCTGGAGAACCTGCGCGGCCGGGTCTGGAACGCGCTGGCCTCGGCCATTGCCGAGGA CCCGTCCGCCCAGCCGGATTTCGAGCGCCTGCGCGTGCGCTTCTACCGGCTGCGGGTGGCGGTAGAGCTGCTTGCCAGCT GCGTGCCCGAGAAGGCACCGAACACGCCGGACTGGCGCCACCCCTTCGCCGCCGCAGCCGACCACATCGCCCGGCGGCTG GAGGCAGTCGAGGTCTCCGACGTACACGCGGAGGAGCGCTTCGAGCGCGCGGTGGCGTCCCTGCGCCGCCTCGCCTTCGT TCCGGAACTGCCGCCGGATGCCCGCTTCGCCCTGCTGCGGGCTCTGACCGCGTTCGACCGGCTGTCCCTCGTGGTCACCG GCATCGCCGCCGCCGAGACCGCGCCCTTCCCGCCGCCCCACGACGACGCGGCGCCCACCCCGCCGGCGCCGCGCGTCATC CCCGCGCTGGTGAAGGGGCCGGACGGCCGGCGCACCCTGTCCGCGCCCATGCGCATCGCCTGCCAGGGCGCCATCGCCAC GGCCGTCACCACCGCCCTCGACCTCGGGGTGCATCTCGACCACGCCTATTGGGCGACCATGACGGTCATGTTCGTCATCG GCAACAGCGTGGGCGAGACCTATATGCGGGTGCGCTACCGCACCGTGGGCACCCTCATCGGCGTGGTGCTGGGCATGGCG CTGTTCCTGGGCCTTGGCCCGCACATCTGGATTCTCGCCGCCTTCTGCATGGCGGCCCAGATGATCGCACTCGTCACCCA GAAGGACCGCTACGACGTGGCATCCGCCGCCGTGGGCCTGTCGGTGGTTCTGGGACTGCACATCATTTCCGGCCTCGGCA CCGAGGGCATGCTGGCCCGCATCTACGAGACCGCCATCGGCGCCGCCATCGCCCTGGTGGTGTCCTATCTGGTGCTGCCG GTCTATCTCGCCGAGCAGTTGCGGCCCGAGGTGAAGGCACTGGTGCGCCGCGCCCGCGTCGCCTTCGCCTCCTGGTGGCC CCACCCGGGGGAGAAGGCGAGCGTCTCCGCCCTCGCCCAGGACGTGCGGGCCATGGGCACGCGCCTGCCCAATCTCGGCG CCGAGCAGGTGTTCGGCCATTCGACGGGGGACGCGGCCAACATCGTCTCCACCCTCGACGTGCTCATCACCTATCTCGCG CTGATGGAGGACGTGGCGCTGCGCCTGTGCGCCATGGGCGCCGATGCGCGCGAGGAGGTCGTGGCCGTGATCGAGGCGGC GCGCTCGCGCATCCTCACCGGCTTCGAGGTGGTGCTGGGCGAGGCCGGCAGCGGCAGCGCCGATGCGGCGACCCCGGCGG TGGATGCCGCGGTCTCCACCGTGCTGGGCATGGCGGACGACCCTGCCGTGATGGAGGTGCTGCCGCTGGTGGCGGATTAT CTCGCCTATTCCGACGCGGTGCTGCGCCCGCTGCACGAACTCAATGCCGCGCTCAACGACGCCGTGCCGTGGCGCAAGGA GGAGATGATCGCCGCCGGCCGCGCGGCCGCCACCTCGACCATCGGCAAGGGGTGA
Upstream 100 bases:
>100_bases GCAGGGCTGGCTATAGAGCAGATGCGGGAAAAGTTGAATGCATGCCGGCGCAGCTCTTGCCGCACTGGACAGGCCCGGCG AACCGTGAATTCCTCCGCCC
Downstream 100 bases:
>100_bases GGCGCCGCTGGCGCTCAGCTCCCCACGGGCTTGAAATGCTTGGAGAGCTTCAGCCCCTGCCCCTGGTAGTGGGAACGCAT GTCGGCGCCGTAGAGCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MPETSRRPGPDPMSPPLSSPVPLSPPHPRKPLLDRLKGWLADHDPGGVDLTRAFHLGVSFVIVILVGYATSTGFRLNMDV TFPMMAGCAALVMISFNPAASVAAEARTMGRLFALGFVFLLAVTLVGPGEGPGNDIVQKLLLVPLAFFALALRRYGMDGQ RLGLALIVVATVGTILRPTRFEGALLLAAFCQGALVAAAVRLSPWRPSAVNAFVETTLDMQGAVATYLRELSEAVRHGRH FPEEANDALENLRGRVWNALASAIAEDPSAQPDFERLRVRFYRLRVAVELLASCVPEKAPNTPDWRHPFAAAADHIARRL EAVEVSDVHAEERFERAVASLRRLAFVPELPPDARFALLRALTAFDRLSLVVTGIAAAETAPFPPPHDDAAPTPPAPRVI PALVKGPDGRRTLSAPMRIACQGAIATAVTTALDLGVHLDHAYWATMTVMFVIGNSVGETYMRVRYRTVGTLIGVVLGMA LFLGLGPHIWILAAFCMAAQMIALVTQKDRYDVASAAVGLSVVLGLHIISGLGTEGMLARIYETAIGAAIALVVSYLVLP VYLAEQLRPEVKALVRRARVAFASWWPHPGEKASVSALAQDVRAMGTRLPNLGAEQVFGHSTGDAANIVSTLDVLITYLA LMEDVALRLCAMGADAREEVVAVIEAARSRILTGFEVVLGEAGSGSADAATPAVDAAVSTVLGMADDPAVMEVLPLVADY LAYSDAVLRPLHELNAALNDAVPWRKEEMIAAGRAAATSTIGKG
Sequences:
>Translated_764_residues MPETSRRPGPDPMSPPLSSPVPLSPPHPRKPLLDRLKGWLADHDPGGVDLTRAFHLGVSFVIVILVGYATSTGFRLNMDV TFPMMAGCAALVMISFNPAASVAAEARTMGRLFALGFVFLLAVTLVGPGEGPGNDIVQKLLLVPLAFFALALRRYGMDGQ RLGLALIVVATVGTILRPTRFEGALLLAAFCQGALVAAAVRLSPWRPSAVNAFVETTLDMQGAVATYLRELSEAVRHGRH FPEEANDALENLRGRVWNALASAIAEDPSAQPDFERLRVRFYRLRVAVELLASCVPEKAPNTPDWRHPFAAAADHIARRL EAVEVSDVHAEERFERAVASLRRLAFVPELPPDARFALLRALTAFDRLSLVVTGIAAAETAPFPPPHDDAAPTPPAPRVI PALVKGPDGRRTLSAPMRIACQGAIATAVTTALDLGVHLDHAYWATMTVMFVIGNSVGETYMRVRYRTVGTLIGVVLGMA LFLGLGPHIWILAAFCMAAQMIALVTQKDRYDVASAAVGLSVVLGLHIISGLGTEGMLARIYETAIGAAIALVVSYLVLP VYLAEQLRPEVKALVRRARVAFASWWPHPGEKASVSALAQDVRAMGTRLPNLGAEQVFGHSTGDAANIVSTLDVLITYLA LMEDVALRLCAMGADAREEVVAVIEAARSRILTGFEVVLGEAGSGSADAATPAVDAAVSTVLGMADDPAVMEVLPLVADY LAYSDAVLRPLHELNAALNDAVPWRKEEMIAAGRAAATSTIGKG >Mature_763_residues PETSRRPGPDPMSPPLSSPVPLSPPHPRKPLLDRLKGWLADHDPGGVDLTRAFHLGVSFVIVILVGYATSTGFRLNMDVT FPMMAGCAALVMISFNPAASVAAEARTMGRLFALGFVFLLAVTLVGPGEGPGNDIVQKLLLVPLAFFALALRRYGMDGQR LGLALIVVATVGTILRPTRFEGALLLAAFCQGALVAAAVRLSPWRPSAVNAFVETTLDMQGAVATYLRELSEAVRHGRHF PEEANDALENLRGRVWNALASAIAEDPSAQPDFERLRVRFYRLRVAVELLASCVPEKAPNTPDWRHPFAAAADHIARRLE AVEVSDVHAEERFERAVASLRRLAFVPELPPDARFALLRALTAFDRLSLVVTGIAAAETAPFPPPHDDAAPTPPAPRVIP ALVKGPDGRRTLSAPMRIACQGAIATAVTTALDLGVHLDHAYWATMTVMFVIGNSVGETYMRVRYRTVGTLIGVVLGMAL FLGLGPHIWILAAFCMAAQMIALVTQKDRYDVASAAVGLSVVLGLHIISGLGTEGMLARIYETAIGAAIALVVSYLVLPV YLAEQLRPEVKALVRRARVAFASWWPHPGEKASVSALAQDVRAMGTRLPNLGAEQVFGHSTGDAANIVSTLDVLITYLAL MEDVALRLCAMGADAREEVVAVIEAARSRILTGFEVVLGEAGSGSADAATPAVDAAVSTVLGMADDPAVMEVLPLVADYL AYSDAVLRPLHELNAALNDAVPWRKEEMIAAGRAAATSTIGKG
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81360; Mature: 81228
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETSRRPGPDPMSPPLSSPVPLSPPHPRKPLLDRLKGWLADHDPGGVDLTRAFHLGVSF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VIVILVGYATSTGFRLNMDVTFPMMAGCAALVMISFNPAASVAAEARTMGRLFALGFVFL HHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHH LAVTLVGPGEGPGNDIVQKLLLVPLAFFALALRRYGMDGQRLGLALIVVATVGTILRPTR HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC FEGALLLAAFCQGALVAAAVRLSPWRPSAVNAFVETTLDMQGAVATYLRELSEAVRHGRH CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FPEEANDALENLRGRVWNALASAIAEDPSAQPDFERLRVRFYRLRVAVELLASCVPEKAP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC NTPDWRHPFAAAADHIARRLEAVEVSDVHAEERFERAVASLRRLAFVPELPPDARFALLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ALTAFDRLSLVVTGIAAAETAPFPPPHDDAAPTPPAPRVIPALVKGPDGRRTLSAPMRIA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHH CQGAIATAVTTALDLGVHLDHAYWATMTVMFVIGNSVGETYMRVRYRTVGTLIGVVLGMA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LFLGLGPHIWILAAFCMAAQMIALVTQKDRYDVASAAVGLSVVLGLHIISGLGTEGMLAR HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IYETAIGAAIALVVSYLVLPVYLAEQLRPEVKALVRRARVAFASWWPHPGEKASVSALAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH DVRAMGTRLPNLGAEQVFGHSTGDAANIVSTLDVLITYLALMEDVALRLCAMGADAREEV HHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VAVIEAARSRILTGFEVVLGEAGSGSADAATPAVDAAVSTVLGMADDPAVMEVLPLVADY HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LAYSDAVLRPLHELNAALNDAVPWRKEEMIAAGRAAATSTIGKG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHCCCC >Mature Secondary Structure PETSRRPGPDPMSPPLSSPVPLSPPHPRKPLLDRLKGWLADHDPGGVDLTRAFHLGVSF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VIVILVGYATSTGFRLNMDVTFPMMAGCAALVMISFNPAASVAAEARTMGRLFALGFVFL HHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHH LAVTLVGPGEGPGNDIVQKLLLVPLAFFALALRRYGMDGQRLGLALIVVATVGTILRPTR HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC FEGALLLAAFCQGALVAAAVRLSPWRPSAVNAFVETTLDMQGAVATYLRELSEAVRHGRH CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FPEEANDALENLRGRVWNALASAIAEDPSAQPDFERLRVRFYRLRVAVELLASCVPEKAP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC NTPDWRHPFAAAADHIARRLEAVEVSDVHAEERFERAVASLRRLAFVPELPPDARFALLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ALTAFDRLSLVVTGIAAAETAPFPPPHDDAAPTPPAPRVIPALVKGPDGRRTLSAPMRIA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHH CQGAIATAVTTALDLGVHLDHAYWATMTVMFVIGNSVGETYMRVRYRTVGTLIGVVLGMA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LFLGLGPHIWILAAFCMAAQMIALVTQKDRYDVASAAVGLSVVLGLHIISGLGTEGMLAR HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IYETAIGAAIALVVSYLVLPVYLAEQLRPEVKALVRRARVAFASWWPHPGEKASVSALAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH DVRAMGTRLPNLGAEQVFGHSTGDAANIVSTLDVLITYLALMEDVALRLCAMGADAREEV HHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VAVIEAARSRILTGFEVVLGEAGSGSADAATPAVDAAVSTVLGMADDPAVMEVLPLVADY HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LAYSDAVLRPLHELNAALNDAVPWRKEEMIAAGRAAATSTIGKG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA