BacMap

Definition	Campylobacter jejuni subsp. doylei 269.97, complete genome.
Accession	NC_009707
Length	1,845,106

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The map label for this gene is 153952391

Identifier: 153952391

GI number: 153952391

Start: 942886

End: 944229

Strand: Direct

Name: 153952391

Synonym: JJD26997_1069

Alternate gene names: NA

Gene position: 942886-944229 (Clockwise)

Preceding gene: 153951854

Following gene: 153952219

Centisome position: 51.1

GC content: 31.1

Gene sequence:

>1344_bases
ATGCAAAGACAAACATGGAGTAGCACACTAACTTATATTCTAACAGTTGCTGGAGCAACCATAGGATTTGGAGCAACTTG
GCGTTTTCCCTATCTTGTAGGAGAAAATGGTGGTGGTGCTTATGTATTAGTTTTTTGTATAGCCATGATTATCATAGGCA
TCCCTGTTATTTTAGTTGAAAATGTCATAGGTAGAAAAGCGATGACAAATAGCGTAGATGCTTTTAAACAAAAATGGCAA
AGTATTGGATATATGGGACTTTTAGGAAGTTTTGGTATAATGGCTTACTACATGGTACTTGGAGGGTGGGTTTTAGTTTA
TATTTGGGAATTAACCCTAGAAAATTTTAGCCTTGCCAATGTAGTAAGCAAAGAATTTACTCATCAGTTTTTTAACGACA
AAATAGCCTTCAATCCTTTAGGAGTCGGTATTTTTACCACTGTTTTTGTAATTGTTAATTATATTATTTTAAAAAGAGGT
ATTATAGATGGTATAGAAAAATCCGTCAAATTTTTAATGCCTTTATTATTTATCTGTCTTATTATTGTTATTGGACGCAA
TTTAACCCTTGATGGAGCTATGGCTGGGGTTAAATTTTATCTTCAACCTGATTTTAGTAAAATTTTATCACCGAAGCTTT
TAATCGATGTTTTAGGGCAAGTCTTTTTTGCTTTATCTCTAGGTTTTGGGGTAATGATAACACTTTCATCTCATCTTAAT
AAAAATGAAAATATGGCAAAAACTGCTATTTATACAGGAGTTTTAAATACTATCATAGCTGTTTTGGCTGGTTTTATGAT
TTTTCCAGCACTTTTCTCAGCAGGACTTGCTCCAGATAGCGGACCTTCTTTGGTTTTTGAAACTTTACCTATAGCATTTT
CTCATATCCATTTTGGCACCATTGTGTGTATTTTATTTTTTGCCTTACTCTTGATTGCAGCTTTAACCACAAGCTTGCCA
ATTTATCAAGTTATTATTAGCGTATTAGAAGAAAAATTTAAATATTCTAAAAATCTTTCTATTAACCTAACTCTAGGATT
TATCTTCATACTTGGCAATCTTCCTTGTATTCTAACTTATGGGCCTTGGCGTGATATTGTTATCATCAAAGGAAAAAACA
TTTTTGATAGTTTTGATTTCATTAGTGGAAATATTTTGTTTGTTTTAACTGCATTTTTTTGCTGCATTTATGTAGGTTGG
ATTTTGGGCAAACAAGAAAGTCTAAAAGAACTTAGCAATAACAATACACTTAAAAGTTCATGGTTTGGAATTTGGTTTTA
TTATGTAAAATATATAGTACCTTTGATTATTTTAATCATTTTTATCTATGGAATTTTAAACTAA

Upstream 100 bases:

>100_bases
ATAAATGCTTAAAAAATACTTACGATATAAGCTATATGGATAGCTTATAAGTTTTTAAAGTTATTTTTAGGTAAAATAAT
TCTTTTTTGAAAGGATAATC

Downstream 100 bases:

>100_bases
TTTTTTGAATTTGTATCTCTCTAACATAGTGGAATTTCCTAAAATTCCACCTTGATGTATATAAAGTAATGGTTTTTTCC
ATTCTTGTCTTAGCGCTATA

Product: putative sodium-dependent transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVFCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQ
SIGYMGLLGSFGIMAYYMVLGGWVLVYIWELTLENFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIVNYIILKRG
IIDGIEKSVKFLMPLLFICLIIVIGRNLTLDGAMAGVKFYLQPDFSKILSPKLLIDVLGQVFFALSLGFGVMITLSSHLN
KNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSGPSLVFETLPIAFSHIHFGTIVCILFFALLLIAALTTSLP
IYQVIISVLEEKFKYSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVGW
ILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN

Sequences:

>Translated_447_residues
MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVFCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQ
SIGYMGLLGSFGIMAYYMVLGGWVLVYIWELTLENFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIVNYIILKRG
IIDGIEKSVKFLMPLLFICLIIVIGRNLTLDGAMAGVKFYLQPDFSKILSPKLLIDVLGQVFFALSLGFGVMITLSSHLN
KNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSGPSLVFETLPIAFSHIHFGTIVCILFFALLLIAALTTSLP
IYQVIISVLEEKFKYSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVGW
ILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN
>Mature_447_residues
MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVFCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQ
SIGYMGLLGSFGIMAYYMVLGGWVLVYIWELTLENFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIVNYIILKRG
IIDGIEKSVKFLMPLLFICLIIVIGRNLTLDGAMAGVKFYLQPDFSKILSPKLLIDVLGQVFFALSLGFGVMITLSSHLN
KNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSGPSLVFETLPIAFSHIHFGTIVCILFFALLLIAALTTSLP
IYQVIISVLEEKFKYSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVGW
ILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN

Specific function: Putative sodium-dependent transporter [H]

COG id: COG0733

COG function: function code R; Na+-dependent transporters of the SNF family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]

Homologues:

Organism=Homo sapiens, GI188528618, Length=490, Percent_Identity=24.8979591836735, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI4507043, Length=379, Percent_Identity=26.6490765171504, Blast_Score=138, Evalue=8e-33,
Organism=Homo sapiens, GI7657587, Length=461, Percent_Identity=25.5965292841649, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI21361581, Length=459, Percent_Identity=24.1830065359477, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI197276623, Length=501, Percent_Identity=25.5489021956088, Blast_Score=129, Evalue=8e-30,
Organism=Homo sapiens, GI54607094, Length=501, Percent_Identity=25.5489021956088, Blast_Score=129, Evalue=8e-30,
Organism=Homo sapiens, GI171184408, Length=452, Percent_Identity=24.7787610619469, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI171184406, Length=452, Percent_Identity=24.7787610619469, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI171184404, Length=452, Percent_Identity=24.7787610619469, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI5032097, Length=502, Percent_Identity=23.1075697211155, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI33354281, Length=360, Percent_Identity=27.2222222222222, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI58219014, Length=364, Percent_Identity=28.021978021978, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI289191351, Length=397, Percent_Identity=26.1964735516373, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI4557046, Length=397, Percent_Identity=26.1964735516373, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI289191377, Length=397, Percent_Identity=26.1964735516373, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI51468073, Length=292, Percent_Identity=26.027397260274, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI4507041, Length=384, Percent_Identity=24.7395833333333, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI218563756, Length=495, Percent_Identity=22.2222222222222, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI194018524, Length=295, Percent_Identity=27.4576271186441, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI11181770, Length=295, Percent_Identity=26.1016949152542, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI134304856, Length=382, Percent_Identity=25.3926701570681, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI67782317, Length=352, Percent_Identity=25, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI67782313, Length=352, Percent_Identity=25, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI67782315, Length=352, Percent_Identity=25, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI92859670, Length=283, Percent_Identity=26.8551236749117, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI218563758, Length=270, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI12408638, Length=273, Percent_Identity=22.3443223443223, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI21361693, Length=109, Percent_Identity=37.6146788990826, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI289191353, Length=210, Percent_Identity=30, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI6005715, Length=310, Percent_Identity=25.8064516129032, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI300360519, Length=271, Percent_Identity=23.9852398523985, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI197276625, Length=140, Percent_Identity=29.2857142857143, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI226437581, Length=312, Percent_Identity=23.7179487179487, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI133952791, Length=536, Percent_Identity=24.2537313432836, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI25146584, Length=504, Percent_Identity=24.4047619047619, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17555248, Length=420, Percent_Identity=25.7142857142857, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17554804, Length=480, Percent_Identity=23.125, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71995588, Length=500, Percent_Identity=23.8, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI115534083, Length=517, Percent_Identity=20.889748549323, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71998244, Length=362, Percent_Identity=24.3093922651934, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17569475, Length=403, Percent_Identity=19.8511166253102, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24762620, Length=492, Percent_Identity=28.2520325203252, Blast_Score=145, Evalue=5e-35,
Organism=Drosophila melanogaster, GI24661428, Length=496, Percent_Identity=26.2096774193548, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI45550877, Length=470, Percent_Identity=26.8085106382979, Blast_Score=135, Evalue=8e-32,
Organism=Drosophila melanogaster, GI45551183, Length=424, Percent_Identity=26.6509433962264, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI17136952, Length=481, Percent_Identity=22.6611226611227, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI19921936, Length=497, Percent_Identity=23.1388329979879, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24652942, Length=487, Percent_Identity=22.17659137577, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI45551088, Length=487, Percent_Identity=22.5872689938398, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI281364394, Length=481, Percent_Identity=22.6611226611227, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28574704, Length=481, Percent_Identity=22.6611226611227, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI17136950, Length=481, Percent_Identity=22.6611226611227, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28574702, Length=481, Percent_Identity=22.6611226611227, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24639514, Length=499, Percent_Identity=23.2464929859719, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI221329674, Length=499, Percent_Identity=23.2464929859719, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI281364136, Length=519, Percent_Identity=24.4701348747592, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI281365034, Length=499, Percent_Identity=23.2464929859719, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24639516, Length=292, Percent_Identity=27.7397260273973, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281363702, Length=483, Percent_Identity=22.9813664596273, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24639853, Length=515, Percent_Identity=22.5242718446602, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24655079, Length=294, Percent_Identity=27.5510204081633, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24582567, Length=444, Percent_Identity=24.5495495495495, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI19921352, Length=505, Percent_Identity=22.1782178217822, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24584353, Length=505, Percent_Identity=22.1782178217822, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24654186, Length=307, Percent_Identity=27.6872964169381, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281363700, Length=294, Percent_Identity=24.8299319727891, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24582569, Length=406, Percent_Identity=22.9064039408867, Blast_Score=73, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000175 [H]

Pfam domain/function: PF00209 SNF [H]

EC number: NA

Molecular weight: Translated: 49739; Mature: 49739

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00610 NA_NEUROTRAN_SYMP_1 ; PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVFCIAMIIIGIPVILVE
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
NVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGGWVLVYIWELTLENFSLAN
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIVNYIILKRGIIDGIEKSVKFLMPLLFICL
HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIVIGRNLTLDGAMAGVKFYLQPDFSKILSPKLLIDVLGQVFFALSLGFGVMITLSSHLN
HHHHCCCCCCCHHHHCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCHHHEEEEHHHCC
KNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSGPSLVFETLPIAFSHIHFGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
IVCILFFALLLIAALTTSLPIYQVIISVLEEKFKYSKNLSINLTLGFIFILGNLPCILTY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEEEEE
GPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVGWILGKQESLKELSNNNTLKSS
CCCCCEEEEECCCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH
WFGIWFYYVKYIVPLIILIIFIYGILN
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVFCIAMIIIGIPVILVE
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
NVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGGWVLVYIWELTLENFSLAN
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIVNYIILKRGIIDGIEKSVKFLMPLLFICL
HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIVIGRNLTLDGAMAGVKFYLQPDFSKILSPKLLIDVLGQVFFALSLGFGVMITLSSHLN
HHHHCCCCCCCHHHHCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCHHHEEEEHHHCC
KNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSGPSLVFETLPIAFSHIHFGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
IVCILFFALLLIAALTTSLPIYQVIISVLEEKFKYSKNLSINLTLGFIFILGNLPCILTY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEEEEE
GPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVGWILGKQESLKELSNNNTLKSS
CCCCCEEEEECCCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH
WFGIWFYYVKYIVPLIILIIFIYGILN
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]