Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
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Accession | NC_009707 |
Length | 1,845,106 |
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The map label for this gene is 153952328
Identifier: 153952328
GI number: 153952328
Start: 1127232
End: 1128986
Strand: Direct
Name: 153952328
Synonym: JJD26997_1279
Alternate gene names: NA
Gene position: 1127232-1128986 (Clockwise)
Preceding gene: 153952126
Following gene: 153952115
Centisome position: 61.09
GC content: 27.64
Gene sequence:
>1755_bases ATGTTTGATAAAATTCATTATTATTATTTTAATGCTGATTATGAAAAATGTTTAAACTTAAGCGAACAATTTTTAAAAGA AAGTTCAAAATTTGCTTTAGAATTTGCCATGCTTTCTTCTTATAAACTTTCTCTTTTTCAAAAAGCCTTATATTATGCCG AGGAGCTTTTTTCTTTAAATCCTACAAGTTTTAATGGTCTTATGCTTGCTAAAGGCTATATTGAAAATTTAAGACTTGAT GAAGCCTTGAATTTATTACAAACACTTTTAACTCGCAAAGACGATTTAGAAGATGAACTTAAGTTAGAATTGGCTTTTGC CTATAAACTGAGCAATAAACTAGAAGAATCTGAAAAAATTTTCAAAGAATTGCTTTCTAAAGATATGTATAATTTTAATC TATGGAAAAATTATGCAGAAATTTATTTCAGACATGATTGTGCTAAGGCATTAGATGCGCATGAACACTTGTGTCATTTC ATGCAAGATTTGATTGATAAACTACAAAAAGGAATCCTTGTAGAACAAACCCATCTTAATTTAGTTAAACTTGAAGATAG ACTTCACAGTAAAACCAAAGAAAATCTTACTATTTCTAAAATAGAAGATTTCTTAATCCATCAAATTTTACCCCAAAAGG CATACTTGCTTTTTAAGCTTTTTAGAATATCTGATTCTTTAGAACTTTTTCAATCACTACAAGAAGCCAATCAACACCAT GCGCAGTTTTGGCAAAACTATGCTAAGGTATTAGAATTTAACTCAAACTATCAAGAGGCTTATCATGCTTATAAAAAATG TCTCAGTTTAGATTCTCATGCAACTTATCAATTTGATTTAGCTTATCTTTTGATGCGTATGGGAGTAGATGATAATTTTG AAGAGGGTAAGAAGTATTATGAAAGCAGGTTGTTTTATGCTCATAATGAAACTTTTTCTCCTTATCATTATAATGAAAGC CTAAAGGCTTTTAATAAATTGGGCATTGATGCTTTTAAAGATAAAGAAGTTTTAGTATTTTGCGAGCAAGGCTTTGGTGA TACTATCATGTATGCAAGATGCTTAGAAAAACTTTGTAAAATCACTTCAAAGGTTTTATTTGCTCCCCAAAGTGCTATGT ATAAAATGTTTAAAAATCAAATCAAATTTTTAAATCAAAAGGATGATATTTTTAAAAATTTAAAGGTTTTAAAAAATCTA CCTATGCATTTTGATTATGCTATTCCTATTTGCTCTTTGCCTTTTTTTATTGATATTAAACTGGATGAGATTTCAAGGTT AAAAACACCTATATTAGCACAGAAAAAACCGCATAATAAAAGAAAAAAACTGGGTATTTTTTATGCTACTCCTAATGCTG AAAATTCTAATTTATCAAGAAATGTAAAATTTGAATTTTTATTGGATATATTAAAAGATTTAGATTATGAAATCATTTCT TTTCAAATGCAATTAAAAGAAGAATTGCCTAAGATAATAGAAGATAGGAGCAAGCTTATAACAAATTGGAATGATACGCT AAATTATTTACATGATATTGACTGTATGCTTAGTATTGATAGTGCTATAGCGCATTTAAGTTTAGCTATGGATATTCCTA CTATAGTTCTTTTGTATCCTAAGTTTGATTGGCGTTGGGGGAAATTTGAAAATCCTAAAAGTTATTTTTGGCCAAAAGCA AAATGTTTTATCATAAAAGAACAAGAAGAAACAAAAAAGAATTTGCAAAAACTGATTAAAGATATTTTAAACTAA
Upstream 100 bases:
>100_bases TGTTTTCATTGTATTTGTTTTTATGAATATTTTGTATAATTATCTTTTTATGCAACTTATAAGATAATATCAGATTGTAA TTTGACTATCTAGGAAGATC
Downstream 100 bases:
>100_bases AGCTTATTTTAAGAGCTTTAGGTGGAAAATTTGGTTTTGGATTTATAAAAATTAAAAAATTGATTTTTAAACGAATCAAG GTATAATTTCAAAGTTAAAA
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Exostosin Family Protein; Tetratricopeptide Tpr_2 Repeat Protein; Sulfotransferase; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MFDKIHYYYFNADYEKCLNLSEQFLKESSKFALEFAMLSSYKLSLFQKALYYAEELFSLNPTSFNGLMLAKGYIENLRLD EALNLLQTLLTRKDDLEDELKLELAFAYKLSNKLEESEKIFKELLSKDMYNFNLWKNYAEIYFRHDCAKALDAHEHLCHF MQDLIDKLQKGILVEQTHLNLVKLEDRLHSKTKENLTISKIEDFLIHQILPQKAYLLFKLFRISDSLELFQSLQEANQHH AQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATYQFDLAYLLMRMGVDDNFEEGKKYYESRLFYAHNETFSPYHYNES LKAFNKLGIDAFKDKEVLVFCEQGFGDTIMYARCLEKLCKITSKVLFAPQSAMYKMFKNQIKFLNQKDDIFKNLKVLKNL PMHFDYAIPICSLPFFIDIKLDEISRLKTPILAQKKPHNKRKKLGIFYATPNAENSNLSRNVKFEFLLDILKDLDYEIIS FQMQLKEELPKIIEDRSKLITNWNDTLNYLHDIDCMLSIDSAIAHLSLAMDIPTIVLLYPKFDWRWGKFENPKSYFWPKA KCFIIKEQEETKKNLQKLIKDILN
Sequences:
>Translated_584_residues MFDKIHYYYFNADYEKCLNLSEQFLKESSKFALEFAMLSSYKLSLFQKALYYAEELFSLNPTSFNGLMLAKGYIENLRLD EALNLLQTLLTRKDDLEDELKLELAFAYKLSNKLEESEKIFKELLSKDMYNFNLWKNYAEIYFRHDCAKALDAHEHLCHF MQDLIDKLQKGILVEQTHLNLVKLEDRLHSKTKENLTISKIEDFLIHQILPQKAYLLFKLFRISDSLELFQSLQEANQHH AQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATYQFDLAYLLMRMGVDDNFEEGKKYYESRLFYAHNETFSPYHYNES LKAFNKLGIDAFKDKEVLVFCEQGFGDTIMYARCLEKLCKITSKVLFAPQSAMYKMFKNQIKFLNQKDDIFKNLKVLKNL PMHFDYAIPICSLPFFIDIKLDEISRLKTPILAQKKPHNKRKKLGIFYATPNAENSNLSRNVKFEFLLDILKDLDYEIIS FQMQLKEELPKIIEDRSKLITNWNDTLNYLHDIDCMLSIDSAIAHLSLAMDIPTIVLLYPKFDWRWGKFENPKSYFWPKA KCFIIKEQEETKKNLQKLIKDILN >Mature_584_residues MFDKIHYYYFNADYEKCLNLSEQFLKESSKFALEFAMLSSYKLSLFQKALYYAEELFSLNPTSFNGLMLAKGYIENLRLD EALNLLQTLLTRKDDLEDELKLELAFAYKLSNKLEESEKIFKELLSKDMYNFNLWKNYAEIYFRHDCAKALDAHEHLCHF MQDLIDKLQKGILVEQTHLNLVKLEDRLHSKTKENLTISKIEDFLIHQILPQKAYLLFKLFRISDSLELFQSLQEANQHH AQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATYQFDLAYLLMRMGVDDNFEEGKKYYESRLFYAHNETFSPYHYNES LKAFNKLGIDAFKDKEVLVFCEQGFGDTIMYARCLEKLCKITSKVLFAPQSAMYKMFKNQIKFLNQKDDIFKNLKVLKNL PMHFDYAIPICSLPFFIDIKLDEISRLKTPILAQKKPHNKRKKLGIFYATPNAENSNLSRNVKFEFLLDILKDLDYEIIS FQMQLKEELPKIIEDRSKLITNWNDTLNYLHDIDCMLSIDSAIAHLSLAMDIPTIVLLYPKFDWRWGKFENPKSYFWPKA KCFIIKEQEETKKNLQKLIKDILN
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69362; Mature: 69362
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDKIHYYYFNADYEKCLNLSEQFLKESSKFALEFAMLSSYKLSLFQKALYYAEELFSLN CCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTSFNGLMLAKGYIENLRLDEALNLLQTLLTRKDDLEDELKLELAFAYKLSNKLEESEKI CCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FKELLSKDMYNFNLWKNYAEIYFRHDCAKALDAHEHLCHFMQDLIDKLQKGILVEQTHLN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCH LVKLEDRLHSKTKENLTISKIEDFLIHQILPQKAYLLFKLFRISDSLELFQSLQEANQHH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATYQFDLAYLLMRMGVDDNFEEGKKYY HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH ESRLFYAHNETFSPYHYNESLKAFNKLGIDAFKDKEVLVFCEQGFGDTIMYARCLEKLCK HHHEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH ITSKVLFAPQSAMYKMFKNQIKFLNQKDDIFKNLKVLKNLPMHFDYAIPICSLPFFIDIK HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCCHHHCCCEEEEEE LDEISRLKTPILAQKKPHNKRKKLGIFYATPNAENSNLSRNVKFEFLLDILKDLDYEIIS HHHHHHHCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH FQMQLKEELPKIIEDRSKLITNWNDTLNYLHDIDCMLSIDSAIAHLSLAMDIPTIVLLYP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC KFDWRWGKFENPKSYFWPKAKCFIIKEQEETKKNLQKLIKDILN CCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFDKIHYYYFNADYEKCLNLSEQFLKESSKFALEFAMLSSYKLSLFQKALYYAEELFSLN CCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTSFNGLMLAKGYIENLRLDEALNLLQTLLTRKDDLEDELKLELAFAYKLSNKLEESEKI CCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FKELLSKDMYNFNLWKNYAEIYFRHDCAKALDAHEHLCHFMQDLIDKLQKGILVEQTHLN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCH LVKLEDRLHSKTKENLTISKIEDFLIHQILPQKAYLLFKLFRISDSLELFQSLQEANQHH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATYQFDLAYLLMRMGVDDNFEEGKKYY HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH ESRLFYAHNETFSPYHYNESLKAFNKLGIDAFKDKEVLVFCEQGFGDTIMYARCLEKLCK HHHEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH ITSKVLFAPQSAMYKMFKNQIKFLNQKDDIFKNLKVLKNLPMHFDYAIPICSLPFFIDIK HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCCHHHCCCEEEEEE LDEISRLKTPILAQKKPHNKRKKLGIFYATPNAENSNLSRNVKFEFLLDILKDLDYEIIS HHHHHHHCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH FQMQLKEELPKIIEDRSKLITNWNDTLNYLHDIDCMLSIDSAIAHLSLAMDIPTIVLLYP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC KFDWRWGKFENPKSYFWPKAKCFIIKEQEETKKNLQKLIKDILN CCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA