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The map label for this gene is fliP [H]

Identifier: 153951658

GI number: 153951658

Start: 1046196

End: 1046930

Strand: Direct

Name: fliP [H]

Synonym: JJD26997_1195

Alternate gene names: 153951658

Gene position: 1046196-1046930 (Clockwise)

Preceding gene: 153951864

Following gene: 153952315

Centisome position: 56.7

GC content: 32.65

Gene sequence:

>735_bases
TTGAAAAAAATATTATTATTTTTACTTTTAAGCATGAGTTTATTTGCTGCTGAAGCAACTATCCCTACTATAAATTTAAG
CTTAAGTGCACCTAATACACCTAATCAGCTTGTTACTACTTTAAATATAGTGATTGTTTTAACCATACTTGCGCTCGCCC
CAAGTATAGTTTTTGTTATGACTTCTTTCTTGCGTCTTATTGTAGTATTTTCATTTTTGCGACAAGCTATGGGGACGCAA
AGTATGCCACCTAACACTATTTTAGTAACCTTGGCTTTAATTTTAACTTTTTTTATCATGGAACCTGTAGCTACAAAATC
CTATAATGAAGGTATAAAACCTTATTTAGCAGAACAAATAGGCTATGAAGAGGCTTTTATAAAAGGAACAAAGCCTTTTA
AAGATTTTATGCTTAAAAATACTCGAGAAAAAGATTTAGCCCTTTTTTATCGCATACGCAATCTACCCAATCCCAAAACC
ATAGATGATGTTCCCCTTACGGTTTTAGTTCCTGCTTTTATGATTTCAGAGCTTAAAACTGCTTTTGAAATAGGGTTTTT
AATTTACTTACCCTTTTTAGTCATAGATATGGTTGTAAGCTCAGTTTTAATGGCTATGGGTATGATGATGCTACCTCCTA
CTATGATCTCTTTACCTTTTAAACTCTTAATTTTTGTATTAGTGGATGGATGGAATTTGCTAGTGCAAAGGCTTGTGGAA
AGCTTTGTAACCTAA

Upstream 100 bases:

>100_bases
AGTTTAAAGTTAAAATCCTAATACCCTTAAACTAGTTTTTAGTCATCAAAAGATAAAATTTAAATTTCTTTAATAAAAAA
CAAAAAAAGGTTTTTAAATT

Downstream 100 bases:

>100_bases
GATTTATAAAATCTTAAAAACAAAATTCCAAGAAAAAGATACAAAAGCAAAAATAATTCTAAAGCTAAAAGTATATACAA
AAACAAGCCTTTAACGCAAA

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKKILLFLLLSMSLFAAEATIPTINLSLSAPNTPNQLVTTLNIVIVLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQ
SMPPNTILVTLALILTFFIMEPVATKSYNEGIKPYLAEQIGYEEAFIKGTKPFKDFMLKNTREKDLALFYRIRNLPNPKT
IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISLPFKLLIFVLVDGWNLLVQRLVE
SFVT

Sequences:

>Translated_244_residues
MKKILLFLLLSMSLFAAEATIPTINLSLSAPNTPNQLVTTLNIVIVLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQ
SMPPNTILVTLALILTFFIMEPVATKSYNEGIKPYLAEQIGYEEAFIKGTKPFKDFMLKNTREKDLALFYRIRNLPNPKT
IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISLPFKLLIFVLVDGWNLLVQRLVE
SFVT
>Mature_244_residues
MKKILLFLLLSMSLFAAEATIPTINLSLSAPNTPNQLVTTLNIVIVLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQ
SMPPNTILVTLALILTFFIMEPVATKSYNEGIKPYLAEQIGYEEAFIKGTKPFKDFMLKNTREKDLALFYRIRNLPNPKT
IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISLPFKLLIFVLVDGWNLLVQRLVE
SFVT

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=228, Percent_Identity=49.5614035087719, Blast_Score=223, Evalue=8e-60,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27378; Mature: 27378

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCC
>Mature Secondary Structure
MKKILLFLLLSMSLFAAEATIPTINLSLSAPNTPNQLVTTLNIVIVLTILALAPSIVFVM
CHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEPVATKSYNEGIKPYLAEQI
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GYEEAFIKGTKPFKDFMLKNTREKDLALFYRIRNLPNPKTIDDVPLTVLVPAFMISELKT
CHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
AFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISLPFKLLIFVLVDGWNLLVQRLVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SFVT
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]