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The map label for this gene is tonB [H]

Identifier: 153951554

GI number: 153951554

Start: 1107040

End: 1107747

Strand: Direct

Name: tonB [H]

Synonym: JJD26997_1262

Alternate gene names: 153951554

Gene position: 1107040-1107747 (Clockwise)

Preceding gene: 153952524

Following gene: 153951295

Centisome position: 60.0

GC content: 28.81

Gene sequence:

>708_bases
ATGAAAACATTTATAAACAATCATAAAAACCAATCTTCCCTTATTACTTTATTTGTTTTTACACCTTTATTTTTTGTTTT
TCTTTATTCTAAAAATTTTTTACATATACAGCCTAATGACGTTATTAAAGAAAATAAATTTAATATGGCAATAAAACATT
TTGTACAAAATTCCTCCGATATAAAACCGACACAGCCAACACAAACCATACAAGAACCTTCCAATATACAACCTAAAGAA
CCTGTGCAAGAAATAATCAAAAAACCAAAACCAAGAAAAGAAAAACCTATCATTAAACCTAAAAAAATAATCCCTCCAAC
AAACGCAAAGGCAATAAGTCAATCCAAAAAAGATACAAGCTCACAACAACCAATCGCGCAGCAACAAACCCCACAAACCA
ACTCTTACCAAAGTGTATCTTTAACTAGCAATAGTGAGCTTTTAAAAGAAATAAAATCAGCAATCGATGAAGCCCTAATC
TACCCTAGACAAGCTAGAAAAATGCGTATGAGCGGGGAAGTTCTTGTAGAATTTACTTGGACAAAAAACAAAAAATTAGA
AAATTTAAAAATACTCAAACCTTCAAAATATGATTTCTTAAACAAAAGTGCTTTAGAAACTATACATATAGCTTCTAAAA
AATTTCCACAATACGAAAAAACTTTCCATATAAAAATACCTTTGATATACAAACTAAACTATAAGTAA

Upstream 100 bases:

>100_bases
CTATAATTTTTGTTAAAAATTTATTTTTTAAACAATTTACAATGAAATTAAAGATATTTAAACTGAAAAATAAAAATTAA
AATCATAACGGAGAAAAAAG

Downstream 100 bases:

>100_bases
TTTAATAAAATTATCAAGAATAAGAGAAGACATTTAACAAGTCCGCAATGAGCTACTTTCCCCCTGCCAGTAAGGCGTAG
TATCATCACCCACGATGTGC

Product: protein TonB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKTFINNHKNQSSLITLFVFTPLFFVFLYSKNFLHIQPNDVIKENKFNMAIKHFVQNSSDIKPTQPTQTIQEPSNIQPKE
PVQEIIKKPKPRKEKPIIKPKKIIPPTNAKAISQSKKDTSSQQPIAQQQTPQTNSYQSVSLTSNSELLKEIKSAIDEALI
YPRQARKMRMSGEVLVEFTWTKNKKLENLKILKPSKYDFLNKSALETIHIASKKFPQYEKTFHIKIPLIYKLNYK

Sequences:

>Translated_235_residues
MKTFINNHKNQSSLITLFVFTPLFFVFLYSKNFLHIQPNDVIKENKFNMAIKHFVQNSSDIKPTQPTQTIQEPSNIQPKE
PVQEIIKKPKPRKEKPIIKPKKIIPPTNAKAISQSKKDTSSQQPIAQQQTPQTNSYQSVSLTSNSELLKEIKSAIDEALI
YPRQARKMRMSGEVLVEFTWTKNKKLENLKILKPSKYDFLNKSALETIHIASKKFPQYEKTFHIKIPLIYKLNYK
>Mature_235_residues
MKTFINNHKNQSSLITLFVFTPLFFVFLYSKNFLHIQPNDVIKENKFNMAIKHFVQNSSDIKPTQPTQTIQEPSNIQPKE
PVQEIIKKPKPRKEKPIIKPKKIIPPTNAKAISQSKKDTSSQQPIAQQQTPQTNSYQSVSLTSNSELLKEIKSAIDEALI
YPRQARKMRMSGEVLVEFTWTKNKKLENLKILKPSKYDFLNKSALETIHIASKKFPQYEKTFHIKIPLIYKLNYK

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 27313; Mature: 27313

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFINNHKNQSSLITLFVFTPLFFVFLYSKNFLHIQPNDVIKENKFNMAIKHFVQNSSD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCHHHHHHHHHHCCCCC
IKPTQPTQTIQEPSNIQPKEPVQEIIKKPKPRKEKPIIKPKKIIPPTNAKAISQSKKDTS
CCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
SQQPIAQQQTPQTNSYQSVSLTSNSELLKEIKSAIDEALIYPRQARKMRMSGEVLVEFTW
CCCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEE
TKNKKLENLKILKPSKYDFLNKSALETIHIASKKFPQYEKTFHIKIPLIYKLNYK
CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCC
>Mature Secondary Structure
MKTFINNHKNQSSLITLFVFTPLFFVFLYSKNFLHIQPNDVIKENKFNMAIKHFVQNSSD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCHHHHHHHHHHCCCCC
IKPTQPTQTIQEPSNIQPKEPVQEIIKKPKPRKEKPIIKPKKIIPPTNAKAISQSKKDTS
CCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
SQQPIAQQQTPQTNSYQSVSLTSNSELLKEIKSAIDEALIYPRQARKMRMSGEVLVEFTW
CCCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEE
TKNKKLENLKILKPSKYDFLNKSALETIHIASKKFPQYEKTFHIKIPLIYKLNYK
CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9190817 [H]