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The map label for this gene is tpn32 [H]

Identifier: 153950992

GI number: 153950992

Start: 1086936

End: 1087709

Strand: Direct

Name: tpn32 [H]

Synonym: JJD26997_1240

Alternate gene names: 153950992

Gene position: 1086936-1087709 (Clockwise)

Preceding gene: 153952628

Following gene: 153951885

Centisome position: 58.91

GC content: 31.65

Gene sequence:

>774_bases
ATGAAAATCAAATCTTTATTTATAGCAAGTATTTTAACATTAAGTCTTAATGCAAATGCATTAGAAACCATCACAGTTGC
AGCAACCCCTATCCCTCATGCTGAAATCCTAGAGCAAGTAAAACCTGATTTAGAAAAACAAGGCTATAAACTTGAAATCA
AAGAATTTACGGATTATGTTTTGCCTAATCTAGCTGTTGATAATGGAGAAGCCGATGCAAATTTTTTCCAACATACTCCT
TATTTGGAAGAATTTAATAAAAACAAAGGTACCAAACTTATCAAAGTAGCTGCCATACACATAGAACCTATGGCTGTTTA
CTCCAAGAAATATAAAAGTCTAGATGATATTAAAGAAGGGGCTAAAATCGCTATTCCAAATGATCCAACCAATGAAAGTA
GAGCTTTAGATATTATTGCAAAAAAAGGTTTGGTAAAATTTAAAGATAAGGCTTTAAAAACACCTCTTGATCTTATAGAC
AATCCTAAAAAAATTAAATTTGTAGAATTAAAGCCCGCACAACTTCCAAGAGCTTTAGATGATGTTGATTTTGCTGTAAT
TAACTCTAATTACGCTCTCTCTGCAAATCTAAATCCTGCAAAAGATAGCGTATTTATCGAAGATAAAGAAAGTCCGTATG
CAAACATTCTTGTTGTAAGAGTGGGACATGAAAACGATTCAAAAATCAAAGCCTTAATCCAAGCTCTACAAAGTGATAAA
ATCAAACAATTTATCATAGAAAAATACAACGGATCTGTTTTACCTGCTTTTTAA

Upstream 100 bases:

>100_bases
GCTAATCTGACTATCAACAAGTTTTTATACGCTTCTTCCTGATAGTCAGAGTGAATTTATTAAGATTAAAGCAAGCACAA
AATGACTAAAAAGGAAAAAA

Downstream 100 bases:

>100_bases
CTTTGTCCCTTATCTAGGGACTTTTTTCTTAAATACAAAGGAGTTTTTATGAATTTATTTAAAATTATTATACTAGCTTG
CATTTTAAATTTATCTAGTC

Product: NLPA family lipoprotein

Products: NA

Alternate protein names: 29 kDa protein [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKIKSLFIASILTLSLNANALETITVAATPIPHAEILEQVKPDLEKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTP
YLEEFNKNKGTKLIKVAAIHIEPMAVYSKKYKSLDDIKEGAKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDLID
NPKKIKFVELKPAQLPRALDDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILVVRVGHENDSKIKALIQALQSDK
IKQFIIEKYNGSVLPAF

Sequences:

>Translated_257_residues
MKIKSLFIASILTLSLNANALETITVAATPIPHAEILEQVKPDLEKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTP
YLEEFNKNKGTKLIKVAAIHIEPMAVYSKKYKSLDDIKEGAKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDLID
NPKKIKFVELKPAQLPRALDDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILVVRVGHENDSKIKALIQALQSDK
IKQFIIEKYNGSVLPAF
>Mature_257_residues
MKIKSLFIASILTLSLNANALETITVAATPIPHAEILEQVKPDLEKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTP
YLEEFNKNKGTKLIKVAAIHIEPMAVYSKKYKSLDDIKEGAKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDLID
NPKKIKFVELKPAQLPRALDDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILVVRVGHENDSKIKALIQALQSDK
IKQFIIEKYNGSVLPAF

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=228, Percent_Identity=45.6140350877193, Blast_Score=204, Evalue=5e-54,
Organism=Escherichia coli, GI1790093, Length=217, Percent_Identity=46.0829493087558, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28615; Mature: 28615

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKSLFIASILTLSLNANALETITVAATPIPHAEILEQVKPDLEKQGYKLEIKEFTDYV
CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHCCCHHHCCCEEEHHHHHHHH
LPNLAVDNGEADANFFQHTPYLEEFNKNKGTKLIKVAAIHIEPMAVYSKKYKSLDDIKEG
CCCEEECCCCCCCCHHHCCCCHHHHCCCCCCEEEEEEEEEECHHHHHHHHHCCHHHHHCC
AKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDLIDNPKKIKFVELKPAQLPRALD
CEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCEEEEEEECHHHCCCHHC
DVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILVVRVGHENDSKIKALIQALQSDK
CCCEEEEECCEEEECCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
IKQFIIEKYNGSVLPAF
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKIKSLFIASILTLSLNANALETITVAATPIPHAEILEQVKPDLEKQGYKLEIKEFTDYV
CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHCCCHHHCCCEEEHHHHHHHH
LPNLAVDNGEADANFFQHTPYLEEFNKNKGTKLIKVAAIHIEPMAVYSKKYKSLDDIKEG
CCCEEECCCCCCCCHHHCCCCHHHHCCCCCCEEEEEEEEEECHHHHHHHHHCCHHHHHCC
AKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDLIDNPKKIKFVELKPAQLPRALD
CEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCEEEEEEECHHHCCCHHC
DVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILVVRVGHENDSKIKALIQALQSDK
CCCEEEEECCEEEECCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
IKQFIIEKYNGSVLPAF
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]