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The map label for this gene is nlpA [H]

Identifier: 153951885

GI number: 153951885

Start: 1087758

End: 1088528

Strand: Direct

Name: nlpA [H]

Synonym: JJD26997_1241

Alternate gene names: 153951885

Gene position: 1087758-1088528 (Clockwise)

Preceding gene: 153950992

Following gene: 153951137

Centisome position: 58.95

GC content: 29.96

Gene sequence:

>771_bases
ATGAATTTATTTAAAATTATTATACTAGCTTGCATTTTAAATTTATCTAGTCTATTTGCACAAAGCATTACTATAGGAGC
CACTCCAAATCCTTTTGGTAGCTTACTAGAACTAATGAAAGATGATTTTAAAAATAAAGGGTATGAGCTTAAAATAGTAG
AATTTTCAGACTATATTTTGCCCAATCGTGCATTAGAGGAAAAAGAGCTTGATGCAAATTTATATCAACACAAACCCTTT
TTAGAAGAATACAACCTAAAGAAAGGCTCAAATTTAATTGCAACAACGCCTGTACTTATAGCTCCAGTAGGAGTTTATAG
TAAAAAAATCAAAAATTTAGAAAATCTTAAAGAAGGTGCTAGAGTTGCTATACCTAATGATGCCACCAATGAAAGTAGAG
CTTTAGAGCTTTTAGAGAAAGCAAAATTAATAGAACTTAACAAAAATACTCTCAAAACCCCATTGGACATAAACAAAAAT
CCAAAAAAACTTAAATTTATAGAGCTTAAAGCCGCACAACTTCCAAGGGCTTTAGATGATGTTGATATTGCTATAATTAA
TTCTAATTTCGCACTTGGAGCTGGTCTTAATCCAAGCAAAGATACTATTTTTAGGGAAGATAAAAATAGCCCTTATGTAA
ATTATGTTGTGGTACGCTCAGAAGATAAAAATAGCGAAAAAACTAAAGCAATTGATGAAATTTTAAGAAGCGATAAATTT
AAAGCCATCATTAATGAACATTATAAAGATATATTAATCCCGGCTTTTTAG

Upstream 100 bases:

>100_bases
CAAACAATTTATCATAGAAAAATACAACGGATCTGTTTTACCTGCTTTTTAACTTTGTCCCTTATCTAGGGACTTTTTTC
TTAAATACAAAGGAGTTTTT

Downstream 100 bases:

>100_bases
GAGTATGGTATGAATATTAAAAAAATATTTTTAAGCGTTTTATTTACAATTAGTCTTAGTTTTGGAGCAGATAAAACCAT
AACCATAGGTGCAACACCAA

Product: NLPA family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNLFKIIILACILNLSSLFAQSITIGATPNPFGSLLELMKDDFKNKGYELKIVEFSDYILPNRALEEKELDANLYQHKPF
LEEYNLKKGSNLIATTPVLIAPVGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEDKNSEKTKAIDEILRSDKF
KAIINEHYKDILIPAF

Sequences:

>Translated_256_residues
MNLFKIIILACILNLSSLFAQSITIGATPNPFGSLLELMKDDFKNKGYELKIVEFSDYILPNRALEEKELDANLYQHKPF
LEEYNLKKGSNLIATTPVLIAPVGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEDKNSEKTKAIDEILRSDKF
KAIINEHYKDILIPAF
>Mature_256_residues
MNLFKIIILACILNLSSLFAQSITIGATPNPFGSLLELMKDDFKNKGYELKIVEFSDYILPNRALEEKELDANLYQHKPF
LEEYNLKKGSNLIATTPVLIAPVGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEDKNSEKTKAIDEILRSDKF
KAIINEHYKDILIPAF

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1790093, Length=227, Percent_Identity=47.5770925110132, Blast_Score=187, Evalue=5e-49,
Organism=Escherichia coli, GI1786396, Length=222, Percent_Identity=43.2432432432432, Blast_Score=182, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28847; Mature: 28847

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFKIIILACILNLSSLFAQSITIGATPNPFGSLLELMKDDFKNKGYELKIVEFSDYIL
CHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
PNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAPVGVYSKKIKNLENLKEGA
CCCCCCHHHHCCHHHHCCCCHHHCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHHHHCCC
RVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKNPKKLKFIELKAAQLPRALDD
EEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEEEHHHCCCHHCC
VDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEDKNSEKTKAIDEILRSDKF
CEEEEEECCEEECCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHH
KAIINEHYKDILIPAF
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNLFKIIILACILNLSSLFAQSITIGATPNPFGSLLELMKDDFKNKGYELKIVEFSDYIL
CHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
PNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAPVGVYSKKIKNLENLKEGA
CCCCCCHHHHCCHHHHCCCCHHHCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHHHHCCC
RVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKNPKKLKFIELKAAQLPRALDD
EEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEEEHHHCCCHHCC
VDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEDKNSEKTKAIDEILRSDKF
CEEEEEECCEEECCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHH
KAIINEHYKDILIPAF
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]