Definition | Clostridium botulinum A str. Hall, complete genome. |
---|---|
Accession | NC_009698 |
Length | 3,760,560 |
Click here to switch to the map view.
The map label for this gene is 153937554
Identifier: 153937554
GI number: 153937554
Start: 1446624
End: 1446896
Strand: Reverse
Name: 153937554
Synonym: CLC_1389
Alternate gene names: NA
Gene position: 1446896-1446624 (Counterclockwise)
Preceding gene: 153937791
Following gene: 153935168
Centisome position: 38.48
GC content: 29.3
Gene sequence:
>273_bases ATGACTGTTATCAATAAACTTAATCAAACAATGGAAGCGTTAAAAGGCACAGAATCTAATTGCAGAACTTTTTCTATGGA TACAGATGATCCTAATGCAAAACAAATGTTTAATCAAATAGCTGAAAATATGAAAATGTGTGAAAACATGTTACAAAGCA GAATTAACTTTGTTATGAGTGAAGAACCACAATATCAACCTGAAGAACAACAAAAACAAATACAACAACAAATTCAAATG CAACAACAGCAACAAGATGAACAAAATCAATAA
Upstream 100 bases:
>100_bases TACCCCTCCATTTATTTTCATTGTAAATTTTTTAATAGTATAAATTTATTTATATTATGAAATACTAAATAATGAATTAT AAAAATTGGAGGTATTATAA
Downstream 100 bases:
>100_bases CAATAAAAGACACATTTATTAAAGAAATTCTTATAAATAAAACACTATCAAATTATGTAAAAATATTTGATAGTGTTTTA TTATATTTAATCATTAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMKMCENMLQSRINFVMSEEPQYQPEEQQKQIQQQIQM QQQQQDEQNQ
Sequences:
>Translated_90_residues MTVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMKMCENMLQSRINFVMSEEPQYQPEEQQKQIQQQIQM QQQQQDEQNQ >Mature_89_residues TVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMKMCENMLQSRINFVMSEEPQYQPEEQQKQIQQQIQMQ QQQQDEQNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10694; Mature: 10563
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 9.0 %Met (Mature Protein) 11.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMKMCENMLQSRINFVMS CHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC EEPQYQPEEQQKQIQQQIQMQQQQQDEQNQ CCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMKMCENMLQSRINFVMS HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC EEPQYQPEEQQKQIQQQIQMQQQQQDEQNQ CCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA