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The map label for this gene is ydgM [C]

Identifier: 153935168

GI number: 153935168

Start: 1433896

End: 1435173

Strand: Reverse

Name: ydgM [C]

Synonym: CLC_1379

Alternate gene names: 153935168

Gene position: 1435173-1433896 (Counterclockwise)

Preceding gene: 153937554

Following gene: 153935945

Centisome position: 38.16

GC content: 33.18

Gene sequence:

>1278_bases
ATGTCACATATAGTCGGAAAAGATGCTTACAAAAGTTTAGAAGAAAGATTAAATAGGTTTCCACAAGGGGCTCCACCCTC
TGAAACACTTTATAAAATCTTATCCATGATGTTCACTAAAGAAGAAGCAGCAATGGTTGCAAAACTCCCTATAAAGTCAT
TTAACATAAAAACTGCTAGTGAACTTTGGGGAGTTAGTGAAGTCAAAGCTGCTAATATCCTTCAAGCCTTAGCTTCTAAA
GCATTAATTTTAGATCTTGAATGTGAAAGTGATGGAGAGCAAAAATATATGATGGCTCCTCCAATGGCTGGCTTTTTTGA
ATTTGCTTTAATGAGAGTTGGTACACACCTTGACCAAAAGGTTCTTAGTGAACTATTTCATCAATATCTTAATGTGGAAG
ATGATTTCTCTAAAGAGCTATTTTGGGGTACAGAAACAAAATTAGGTAGAGCCTTTGTTCAGGAGAGGGTTTTAAATGAT
GAAAATTCTATAAATATATTAGATTATGAAAAAGCAAGTTACATAATAAAAAATGCTAAACATATAGGTGTTAGTTCATG
TTATTGTCGACATAAAGCCCATCATTTAGGAGATGACTGTTACGCCCCTATGGAAACTTGCATGAGCTTTTCTACCACTG
CTTACACTCTTATAAAGCATAATTATGCTAGAAAAATAGATGCTTCTGAAGCTCTAGATATTTTAAATATGTGCTATGAT
TATAATCTAGTACAATGTGGAGAAAATGTTCAAAAGCAACCAAACTTTATTTGCAATTGTTGTAAATGCCATTGTGAAGC
ATTTGTATCTGCAAAAAAATTTGGATTCTTAGTTCCAGTTAATACCACCAGTTATTTACCTAACATAAATAAAGATAGGT
GTGTAGGCTGTGGAAAATGCACTAAAGTTTGTCCTATGGAAGCAATTAAATTAAAGGAAACTTCATTAGAAAATCATAAT
TCTAAAATAGCTGAACTCTCCGAAGATTTATGCCTTGGCTGTGGGGTTTGTGTGAAAAATTGCAAAACTAATGCTATTAA
GTTAGTTCGTAGAAAGGAAAGTGTTATCACACCTGTAACCACTGTTCATAGAGCAGTATTATCTGCAATAGAAAAAGGCC
AACTGCAAAATTTAATTTTTGATAATAACGCTCATTTAAGCCATAAAGCCATGGCTGCTATATTAGGAAGCATCCTTAAG
CTTTCTCCTGTAAAAAAAGCAATGGCAAGTAAACAAATGAAATCTGTTTATTTGGCTAAACTCCTAGAAAATACTTAA

Upstream 100 bases:

>100_bases
TATTATAGCAACATAATTATTCTTAATAATTACATTAAATTATTGCATTTATTACCAATCTATGCAATCATATAATTAAC
AATTAGATTGAGGTGAAAAC

Downstream 100 bases:

>100_bases
TAACTTTAAATAATTTTTTAAAATCACTGGAAATACATATAATTAATACAAAAAATAGAAATGAGGTTTTATCATTGATA
AAAATAGAAGATATTTTATC

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: Pyridine Nucleotide-Disulphide Oxidoreductase; Ferredoxin; 4Fe-4S Ferredoxin

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAMVAKLPIKSFNIKTASELWGVSEVKAANILQALASK
ALILDLECESDGEQKYMMAPPMAGFFEFALMRVGTHLDQKVLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLND
ENSINILDYEKASYIIKNAKHIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNYARKIDASEALDILNMCYD
YNLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVNTTSYLPNINKDRCVGCGKCTKVCPMEAIKLKETSLENHN
SKIAELSEDLCLGCGVCVKNCKTNAIKLVRRKESVITPVTTVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSILK
LSPVKKAMASKQMKSVYLAKLLENT

Sequences:

>Translated_425_residues
MSHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAMVAKLPIKSFNIKTASELWGVSEVKAANILQALASK
ALILDLECESDGEQKYMMAPPMAGFFEFALMRVGTHLDQKVLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLND
ENSINILDYEKASYIIKNAKHIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNYARKIDASEALDILNMCYD
YNLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVNTTSYLPNINKDRCVGCGKCTKVCPMEAIKLKETSLENHN
SKIAELSEDLCLGCGVCVKNCKTNAIKLVRRKESVITPVTTVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSILK
LSPVKKAMASKQMKSVYLAKLLENT
>Mature_424_residues
SHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAMVAKLPIKSFNIKTASELWGVSEVKAANILQALASKA
LILDLECESDGEQKYMMAPPMAGFFEFALMRVGTHLDQKVLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLNDE
NSINILDYEKASYIIKNAKHIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNYARKIDASEALDILNMCYDY
NLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVNTTSYLPNINKDRCVGCGKCTKVCPMEAIKLKETSLENHNS
KIAELSEDLCLGCGVCVKNCKTNAIKLVRRKESVITPVTTVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSILKL
SPVKKAMASKQMKSVYLAKLLENT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47534; Mature: 47403

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAMVAKLPIKSFNIKTAS
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ELWGVSEVKAANILQALASKALILDLECESDGEQKYMMAPPMAGFFEFALMRVGTHLDQK
HHCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHH
VLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLNDENSINILDYEKASYIIKNAK
HHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHH
HIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNYARKIDASEALDILNMCYD
HCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
YNLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVNTTSYLPNINKDRCVGCGKC
CCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCCCCCCCCCCC
TKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAIKLVRRKESVITPVT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH
TVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSILKLSPVKKAMASKQMKSVYLAK
HHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLENT
HHHCC
>Mature Secondary Structure 
SHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAMVAKLPIKSFNIKTAS
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ELWGVSEVKAANILQALASKALILDLECESDGEQKYMMAPPMAGFFEFALMRVGTHLDQK
HHCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHH
VLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLNDENSINILDYEKASYIIKNAK
HHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHH
HIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNYARKIDASEALDILNMCYD
HCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
YNLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVNTTSYLPNINKDRCVGCGKC
CCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCCCCCCCCCCC
TKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAIKLVRRKESVITPVT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH
TVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSILKLSPVKKAMASKQMKSVYLAK
HHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLENT
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA