Click here to switch to the map view.

The map label for this gene is yobV [H]

Identifier: 153936393

GI number: 153936393

Start: 1655278

End: 1656222

Strand: Reverse

Name: yobV [H]

Synonym: CLC_1583

Alternate gene names: 153936393

Gene position: 1656222-1655278 (Counterclockwise)

Preceding gene: 153937036

Following gene: 153937024

Centisome position: 44.04

GC content: 25.08

Gene sequence:

>945_bases
ATGAAAATTAATAGATTATTGGCAATTGTTGTAATGCTTTTAAATAGAGAAAAAATATCTGCATCAGAATTAGCTGAAAA
ATTTGAGGTTTCTGTAAGAACAATTTATAGAGATATTGAAGCAATTAATCTTGCTGGAATTCCTATAGTTTCTCAAATTG
GAAATAATGGAGGATTTTATATTATAGATAACTATAAAATCAATCATCAACTTTTAACATTAGAAGATATGATTTCAATT
ATAGAAGCTCTAAAAAATATGAATAAATTTTTAGATAATAAAAATGTTGAAATGGCCATTGAAAAGGTAAAAAATATTGT
TCCTAAAGAAAAAAAAGAAGTATTTGATTTGCATTTTGAGCAAATGTGTATAGATACATTACCTTGGGGCTTTAAAAAAT
GTGAAGAAGAAAACTTAAAATACAAAATTATATATGATGCTGTAGATAACAAAAACTGTATAGCCTTTGATTATAGAAAC
TCAAAAGGTGAATATAATTGGAGGGAGATAGAGCCATTAACTCTTGTTTTTAAAGGTTTCTCATGGTATTTATTTTCCTT
TTGCAAATTAAAAAATGATTACCGACTTTTCAAATTATCAAGAATGGAAAATTTAACTGTTCCACATGAAAAAATTAATG
AAAATAGAATTTCCTATAAAGAATATATAAATATTAGTGAGAGTGAACAAGTACCTACAAGAGTTGTATTAAAGTTTTCT
GAAAGAGTTAGATATAGAATAGACGATTGTTTTGATAAAGATGAAATAAAGTTTCAAGAAGATGGTAGTGTAATTGTAGA
TACATATTTATTAGAAGATGACTGGATATATTCCATGATATTAAGTTACGGAGAATGTGTGGAAGTACTTGAACCCAATC
ATATTAGAGAAATTATAAAGGATAAATGTAAAAAAATTAATGATATATATTCAAATATGACATAG

Upstream 100 bases:

>100_bases
TTATGCAATTCCCTCAACAATTTCTCTCTAACCAATCTTACAAGTTATTAATTTGATATAATAAAATAGTCATTTCAAAT
TATGGGGGGTTTATAGATTC

Downstream 100 bases:

>100_bases
TGTTGTCAAAGCCTTCCTATATAATACAAATATAAGCATAAGGAAGGGGAATAAAATATGTAACAAAGATATTGTCAAAG
TTGTGGAATGCCAATGAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKINRLLAIVVMLLNREKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFYIIDNYKINHQLLTLEDMISI
IEALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFEQMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRN
SKGEYNWREIEPLTLVFKGFSWYLFSFCKLKNDYRLFKLSRMENLTVPHEKINENRISYKEYINISESEQVPTRVVLKFS
ERVRYRIDDCFDKDEIKFQEDGSVIVDTYLLEDDWIYSMILSYGECVEVLEPNHIREIIKDKCKKINDIYSNMT

Sequences:

>Translated_314_residues
MKINRLLAIVVMLLNREKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFYIIDNYKINHQLLTLEDMISI
IEALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFEQMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRN
SKGEYNWREIEPLTLVFKGFSWYLFSFCKLKNDYRLFKLSRMENLTVPHEKINENRISYKEYINISESEQVPTRVVLKFS
ERVRYRIDDCFDKDEIKFQEDGSVIVDTYLLEDDWIYSMILSYGECVEVLEPNHIREIIKDKCKKINDIYSNMT
>Mature_314_residues
MKINRLLAIVVMLLNREKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFYIIDNYKINHQLLTLEDMISI
IEALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFEQMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRN
SKGEYNWREIEPLTLVFKGFSWYLFSFCKLKNDYRLFKLSRMENLTVPHEKINENRISYKEYINISESEQVPTRVVLKFS
ERVRYRIDDCFDKDEIKFQEDGSVIVDTYLLEDDWIYSMILSYGECVEVLEPNHIREIIKDKCKKINDIYSNMT

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 37240; Mature: 37240

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINRLLAIVVMLLNREKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFY
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCEE
IIDNYKINHQLLTLEDMISIIEALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFE
EEECEEECCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
QMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRNSKGEYNWREIEPLTLVFKGF
HHHHHHCCCCHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEECCHHHEEHHHH
SWYLFSFCKLKNDYRLFKLSRMENLTVPHEKINENRISYKEYINISESEQVPTRVVLKFS
HHHHHHHHHHCCCCCEEEEHHHCCCCCCHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHH
ERVRYRIDDCFDKDEIKFQEDGSVIVDTYLLEDDWIYSMILSYGECVEVLEPNHIREIIK
HHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHH
DKCKKINDIYSNMT
HHHHHHHHHHHCCC
>Mature Secondary Structure
MKINRLLAIVVMLLNREKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFY
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCEE
IIDNYKINHQLLTLEDMISIIEALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFE
EEECEEECCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
QMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRNSKGEYNWREIEPLTLVFKGF
HHHHHHCCCCHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEECCHHHEEHHHH
SWYLFSFCKLKNDYRLFKLSRMENLTVPHEKINENRISYKEYINISESEQVPTRVVLKFS
HHHHHHHHHHCCCCCEEEEHHHCCCCCCHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHH
ERVRYRIDDCFDKDEIKFQEDGSVIVDTYLLEDDWIYSMILSYGECVEVLEPNHIREIIK
HHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHH
DKCKKINDIYSNMT
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]