| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is engA
Identifier: 153932865
GI number: 153932865
Start: 2530191
End: 2531510
Strand: Reverse
Name: engA
Synonym: CLB_2396
Alternate gene names: 153932865
Gene position: 2531510-2530191 (Counterclockwise)
Preceding gene: 153931168
Following gene: 153933141
Centisome position: 65.52
GC content: 30.45
Gene sequence:
>1320_bases ATGGCAAAACCTATAGTTGCAATAGTAGGAAGACCTAATGTAGGGAAATCTACACTATTTAATAAGTTAGCAGGAAAAAG AATATCTATAGTACAAGATACACCAGGGGTGACAAGAGACAGAATTTATGCAGAGGCAGAATGGCTAAATTACAAATTTA CAATGATAGATACAGGTGGTATAGAACCAAAAAGTGAAGATATAATAGTATCTCAAATGAGAAGACAGGCGCAAATAGCT ATAGAAATGGCTAATGTAATAATATTTTTAGTAGATGGAAAAGAAGGATTAGCACCAGCAGACAAAGAAGTAGCACAAAT GCTTAGAAAAAGTAAGAAACCTGTAGTGCTTGTAGTAAATAAAATTGATAAATTGAAAGATGAGAATAATGCTTATGAGT TTTATAATCTAGGTATAGGGGATCCTGTAACCATATCTTCATCACAGGCATTAGGCTTAGGTGATATGCTAGATAGAGTT GTAGAATATTTTAAAGATGATGAATCAGCTGGAGAAGATGATGAGAGAATAAATATAGCTTTTATAGGTAAACCCAATGT AGGGAAATCATCACTTATAAATAAGTTATTAGGAGAAGAAAGACTTATAGTAAGTGATATACCGGGAACCACCAGGGATT CCATAGATAGTTATGTAGATACAGATTTTGGTGAGTTTACTTTAATAGATACCGCAGGATTAAGACGTAAGAGTAAAGTA AAAGAAGAAATAGAAAGATATTCTGTAATAAGGACTTATGCATCTATAGAAAGAGCAGATGTATGTATACTTATGATAGA TGCTACAGAGGGTATATCTGAGCAGGATCAAAAAATTATAGGATATGCTCATGATATAAATAAAGCTATTTTAGTTATAG TTAATAAGTGGGATCTAGTTGAAAAAGACGATAAGACTATGGATAAATTTAAAAAAGAGTTAAAAGTTAATTTATCCTTC ATGCCTTATGCAAAATACTTATTTATATCTGCTAAAACAGGCCAAAGGGTTGTAAAAGTTTTACAAACCGCTAAAGAATG TTATGATAATTATAATAAGAGAGTAAAAACAGGAGTTTTAAATGATGTAATAAGTCAAGCTATTATGATGAAAGAGCCTC CTATAGTAGGAACAAAAAGATTAAAAATTTACTATGTAACTCAAATAGGAACAAAACCACCAACTTTTATTTTCTTTGTA AATGATCCAGCTTGCATACATTTCTCTTATCAAAGATATTTAGAAAATCAATTAAGAGAAAATTTTGATTTCCAAGGTAC AGGAATAAAATCAGAGTTTAGAGAAAGAAAAGAAAAATAA
Upstream 100 bases:
>100_bases AAGAATTAAGCAATAGTTTAAAAAGAGAAATTTTAGTATGCGATTATACAGGAGAAGACTTAATAGATATAATAAATAAA CACAGCAAGGAGGAATAAAA
Downstream 100 bases:
>100_bases ATTTAAAGATATCCTATAGCTACTGCCACTTAAACTTATTATATAGAGAGTTTTAAGTGGCAGTGAACGCATAGGAATTT TTAATATAAACTTATTTCTT
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MAKPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGIEPKSEDIIVSQMRRQAQIA IEMANVIIFLVDGKEGLAPADKEVAQMLRKSKKPVVLVVNKIDKLKDENNAYEFYNLGIGDPVTISSSQALGLGDMLDRV VEYFKDDESAGEDDERINIAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTDFGEFTLIDTAGLRRKSKV KEEIERYSVIRTYASIERADVCILMIDATEGISEQDQKIIGYAHDINKAILVIVNKWDLVEKDDKTMDKFKKELKVNLSF MPYAKYLFISAKTGQRVVKVLQTAKECYDNYNKRVKTGVLNDVISQAIMMKEPPIVGTKRLKIYYVTQIGTKPPTFIFFV NDPACIHFSYQRYLENQLRENFDFQGTGIKSEFRERKEK
Sequences:
>Translated_439_residues MAKPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGIEPKSEDIIVSQMRRQAQIA IEMANVIIFLVDGKEGLAPADKEVAQMLRKSKKPVVLVVNKIDKLKDENNAYEFYNLGIGDPVTISSSQALGLGDMLDRV VEYFKDDESAGEDDERINIAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTDFGEFTLIDTAGLRRKSKV KEEIERYSVIRTYASIERADVCILMIDATEGISEQDQKIIGYAHDINKAILVIVNKWDLVEKDDKTMDKFKKELKVNLSF MPYAKYLFISAKTGQRVVKVLQTAKECYDNYNKRVKTGVLNDVISQAIMMKEPPIVGTKRLKIYYVTQIGTKPPTFIFFV NDPACIHFSYQRYLENQLRENFDFQGTGIKSEFRERKEK >Mature_438_residues AKPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGIEPKSEDIIVSQMRRQAQIAI EMANVIIFLVDGKEGLAPADKEVAQMLRKSKKPVVLVVNKIDKLKDENNAYEFYNLGIGDPVTISSSQALGLGDMLDRVV EYFKDDESAGEDDERINIAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTDFGEFTLIDTAGLRRKSKVK EEIERYSVIRTYASIERADVCILMIDATEGISEQDQKIIGYAHDINKAILVIVNKWDLVEKDDKTMDKFKKELKVNLSFM PYAKYLFISAKTGQRVVKVLQTAKECYDNYNKRVKTGVLNDVISQAIMMKEPPIVGTKRLKIYYVTQIGTKPPTFIFFVN DPACIHFSYQRYLENQLRENFDFQGTGIKSEFRERKEK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=460, Percent_Identity=39.5652173913043, Blast_Score=345, Evalue=4e-96, Organism=Escherichia coli, GI1788919, Length=123, Percent_Identity=39.8373983739837, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI2367268, Length=95, Percent_Identity=44.2105263157895, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17507259, Length=213, Percent_Identity=29.5774647887324, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=224, Percent_Identity=31.6964285714286, Blast_Score=97, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_CLOB1 (A7FW89)
Other databases:
- EMBL: CP000726 - RefSeq: YP_001384700.1 - ProteinModelPortal: A7FW89 - SMR: A7FW89 - STRING: A7FW89 - GeneID: 5394713 - GenomeReviews: CP000726_GR - KEGG: cba:CLB_2396 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: KCEKAFD - ProtClustDB: PRK00093 - BioCyc: CBOT441770:CLB_2396-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 49752; Mature: 49621
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGG CCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHEEEEEEEEEEEEEEEECCC IEPKSEDIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADKEVAQMLRKSKKPVVLVVN CCCCCCHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEE KIDKLKDENNAYEFYNLGIGDPVTISSSQALGLGDMLDRVVEYFKDDESAGEDDERINIA CHHHHCCCCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE FIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTDFGEFTLIDTAGLRRKSKV EEECCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHH KEEIERYSVIRTYASIERADVCILMIDATEGISEQDQKIIGYAHDINKAILVIVNKWDLV HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHEEEHCCCCCEEEEEEECCCCC EKDDKTMDKFKKELKVNLSFMPYAKYLFISAKTGQRVVKVLQTAKECYDNYNKRVKTGVL CCCHHHHHHHHHHHEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NDVISQAIMMKEPPIVGTKRLKIYYVTQIGTKPPTFIFFVNDPACIHFSYQRYLENQLRE HHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCEEEEHHHHHHHHHHHHH NFDFQGTGIKSEFRERKEK CCCCCCCCCHHHHHHHCCC >Mature Secondary Structure AKPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGG CCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHEEEEEEEEEEEEEEEECCC IEPKSEDIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADKEVAQMLRKSKKPVVLVVN CCCCCCHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEE KIDKLKDENNAYEFYNLGIGDPVTISSSQALGLGDMLDRVVEYFKDDESAGEDDERINIA CHHHHCCCCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE FIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTDFGEFTLIDTAGLRRKSKV EEECCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHH KEEIERYSVIRTYASIERADVCILMIDATEGISEQDQKIIGYAHDINKAILVIVNKWDLV HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHEEEHCCCCCEEEEEEECCCCC EKDDKTMDKFKKELKVNLSFMPYAKYLFISAKTGQRVVKVLQTAKECYDNYNKRVKTGVL CCCHHHHHHHHHHHEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NDVISQAIMMKEPPIVGTKRLKIYYVTQIGTKPPTFIFFVNDPACIHFSYQRYLENQLRE HHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCEEEEHHHHHHHHHHHHH NFDFQGTGIKSEFRERKEK CCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA