| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153931168
Identifier: 153931168
GI number: 153931168
Start: 2531513
End: 2532847
Strand: Reverse
Name: 153931168
Synonym: CLB_2397
Alternate gene names: NA
Gene position: 2532847-2531513 (Counterclockwise)
Preceding gene: 153933449
Following gene: 153932865
Centisome position: 65.56
GC content: 28.01
Gene sequence:
>1335_bases ATGAAAAAGGAAATACTAAAAGTAGAAAGAGGTAGCATAGCAGAGGAACTTGAAATAGAAGAGGGCGATTTTTTACTGTC TATAAATAATAAAGAAGTTAAAGATATTATCGACTATAAATTTTTAGTTTGTGATGAATACTTAGAAGTTGAAATAGAAA AAAATAACGGGGAAATTTGGGAACTAGAGATAGAAAAGGATTATGATGAGGATTTAGGAATAGAATTTAAAGCAGCTATA TTAGATGTACCTCAAAGATGCCATAATAATTGCTTATTTTGTTTTATAGATCAACTACCAAAAGGTATGAGAGAAACCCT ATATTTTAAAGATGATGATTCAAGATTATCTTTTCTTCAAGGAAATTTTCTTACCCTTACAAATATGAAGGATGAAGACA TAGACAGAATAATAAATTATAAAATAAGTCCTATAAATATATCTGTACATACTACAAATCCAGAACTTAGGGTCAAACTT TTAAATAATAGATTTGCAGGTAATTTATATGACAGGATGAAAAAGCTAGCCCAGGGTGGCATAAAAATGGATTGTCAGGT AGTTTTATGTCCAGGACTTAATAATGGAGAGGAACTAAAAAGAACCATTGAAGATTTATATGCTCTTTATCCTCAGGTTG AAAATTTAGCAGTAGTTCCAATAGGTGTTACAAAATTTAGAGAAGGTTTATATCAATTTGAACTTTTTAATAAAGAAACT GCTAATAAAGAATTAAATATGGTAGAGGAATATCAAAACAAATTTATAAAGGAAATAGGAAAACCTTTTGTAAGATTATC TGATGAATTCTATGTTATAGCAGAAAAAGAAGTGCCTAAAGAAGATTTTTATGATGGATTTAAACAATTAGAAGATGGTG TAGGGGTTATAAGGATATTTAGAAATAATATAAAGGATAATGTAAACAAACTTTCAACTAAAGCTAAGGGTAGTTTTTCA CTTATAACAGGACAATCTGCTTATAAAGAGGTAATAGAGGCTAGTAAAATGATAAATAATCATAGCAATGATATAGATAT AGAAGTTATAAAAATAGATAATAATTTTTTTGGAAAGACCATTACTGTAGCTGGACTTATAACAGCTAAGGATATAATAG AACAAACACAGGAGAAAAATTTAGGAAAGTATGTTATAATTCCAGATGTAATGCTTAGGAAAGGATATGAATTAGCAGAT ATATCCGAACAAGTTTTCTTAGATGATGTAACACTAAAAGAATTAAGCAATAGTTTAAAAAGAGAAATTTTAGTATGCGA TTATACAGGAGAAGACTTAATAGATATAATAAATAAACACAGCAAGGAGGAATAA
Upstream 100 bases:
>100_bases TTTTGTATTTTAAAAATTGAATTTCAAGTTGTAAATTGACTAAATTACTATATTAATGTAATATAATTTAATGATAAATA TAAAATTTGGAGTTGAAAAA
Downstream 100 bases:
>100_bases AAATGGCAAAACCTATAGTTGCAATAGTAGGAAGACCTAATGTAGGGAAATCTACACTATTTAATAAGTTAGCAGGAAAA AGAATATCTATAGTACAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIEKNNGEIWELEIEKDYDEDLGIEFKAAI LDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKL LNNRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGLYQFELFNKET ANKELNMVEEYQNKFIKEIGKPFVRLSDEFYVIAEKEVPKEDFYDGFKQLEDGVGVIRIFRNNIKDNVNKLSTKAKGSFS LITGQSAYKEVIEASKMINNHSNDIDIEVIKIDNNFFGKTITVAGLITAKDIIEQTQEKNLGKYVIIPDVMLRKGYELAD ISEQVFLDDVTLKELSNSLKREILVCDYTGEDLIDIINKHSKEE
Sequences:
>Translated_444_residues MKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIEKNNGEIWELEIEKDYDEDLGIEFKAAI LDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKL LNNRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGLYQFELFNKET ANKELNMVEEYQNKFIKEIGKPFVRLSDEFYVIAEKEVPKEDFYDGFKQLEDGVGVIRIFRNNIKDNVNKLSTKAKGSFS LITGQSAYKEVIEASKMINNHSNDIDIEVIKIDNNFFGKTITVAGLITAKDIIEQTQEKNLGKYVIIPDVMLRKGYELAD ISEQVFLDDVTLKELSNSLKREILVCDYTGEDLIDIINKHSKEE >Mature_444_residues MKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIEKNNGEIWELEIEKDYDEDLGIEFKAAI LDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKL LNNRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGLYQFELFNKET ANKELNMVEEYQNKFIKEIGKPFVRLSDEFYVIAEKEVPKEDFYDGFKQLEDGVGVIRIFRNNIKDNVNKLSTKAKGSFS LITGQSAYKEVIEASKMINNHSNDIDIEVIKIDNNFFGKTITVAGLITAKDIIEQTQEKNLGKYVIIPDVMLRKGYELAD ISEQVFLDDVTLKELSNSLKREILVCDYTGEDLIDIINKHSKEE
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51250; Mature: 51250
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIEKNNGEIW CCCHHHEECCCCCHHHEEECCCCEEEEECCCHHHHHHHHHHEEECCEEEEEEECCCCCEE ELEIEKDYDEDLGIEFKAAILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQ EEEECCCCCCCCCCEEEHHHHHCHHHHCCCEEEEEHHHCCCCHHHCEEEECCCCCEEEEC GNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKLLNNRFAGNLYDRMKKLAQGG CCEEEEECCCHHHHHHHHCEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCC IKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGLYQFELFNKET CCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCHHHEEEECCCC ANKELNMVEEYQNKFIKEIGKPFVRLSDEFYVIAEKEVPKEDFYDGFKQLEDGVGVIRIF CCCHHHHHHHHHHHHHHHHCCHHEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCEEHHH RNNIKDNVNKLSTKAKGSFSLITGQSAYKEVIEASKMINNHSNDIDIEVIKIDNNFFGKT HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCE ITVAGLITAKDIIEQTQEKNLGKYVIIPDVMLRKGYELADISEQVFLDDVTLKELSNSLK EEEEHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCHHCCCHHHHCCCHHHHHHHHHHH REILVCDYTGEDLIDIINKHSKEE HEEEEEECCCHHHHHHHHHCCCCC >Mature Secondary Structure MKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIEKNNGEIW CCCHHHEECCCCCHHHEEECCCCEEEEECCCHHHHHHHHHHEEECCEEEEEEECCCCCEE ELEIEKDYDEDLGIEFKAAILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQ EEEECCCCCCCCCCEEEHHHHHCHHHHCCCEEEEEHHHCCCCHHHCEEEECCCCCEEEEC GNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKLLNNRFAGNLYDRMKKLAQGG CCEEEEECCCHHHHHHHHCEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCC IKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGLYQFELFNKET CCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCHHHEEEECCCC ANKELNMVEEYQNKFIKEIGKPFVRLSDEFYVIAEKEVPKEDFYDGFKQLEDGVGVIRIF CCCHHHHHHHHHHHHHHHHCCHHEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCEEHHH RNNIKDNVNKLSTKAKGSFSLITGQSAYKEVIEASKMINNHSNDIDIEVIKIDNNFFGKT HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCE ITVAGLITAKDIIEQTQEKNLGKYVIIPDVMLRKGYELADISEQVFLDDVTLKELSNSLK EEEEHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCHHCCCHHHHCCCHHHHHHHHHHH REILVCDYTGEDLIDIINKHSKEE HEEEEEECCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA