Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
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Accession | NC_009697 |
Length | 3,863,450 |
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The map label for this gene is 153930993
Identifier: 153930993
GI number: 153930993
Start: 2562846
End: 2563724
Strand: Reverse
Name: 153930993
Synonym: CLB_2436
Alternate gene names: NA
Gene position: 2563724-2562846 (Counterclockwise)
Preceding gene: 153932347
Following gene: 153932944
Centisome position: 66.36
GC content: 30.94
Gene sequence:
>879_bases GTGGGATTAATATTACACCGGGAGTTTGTTTATGGAGAAGGGGGACAGGAAACAGAGACACTTTTAATAAAAGGTGTAAC GCTCCAAGGACTAGCTAAAAGAAGAATTATAATACATGATACAGGACAAGAATTTGATAGTTGTATTGGTAACCAGGAAA CTATAATGAAATATTTTGTAAATAGGAACTGTGTTAATCCAACAGACTTGAATAGAAGAATAGATAACTTGATTGTGGCA GTAGATAAAAAACGTGGTGAAAATGATAGGTGGAGAGGGGCTTATGAAAGCTTAGACGAAAAGTTAAAAGAAATAGGTGA ATATAGCAAGCTTGGTTGGAACATTGTACTAGATCATAAGCAAAAGAAATTTATATTTGATGTAATGCAAGGGAAAAACT TAACAGTTAATCAAAACACTAACCCTCCAGTTATTTTTCGTTCTGATTTTAATAACATAAAGACTAGACATTATACAGAA AGCATTATTAATAGTAGAAATTCTCTTTACATTGGAAGTAAAGAAAAGTTAGTTTTAAACCTTGGTGATATAACTGGATT TGAAAGAATGGAAACATTTTTAGATAGTACATCAGAAGAAGTAGAGGATATAAAAAAAGAAGGTTTAGTTAAGCTTGAAG AGATTAAAGAACTAAAAACATTTGAATTAGAAATTAATCCAAATAGTACATTTGTGTATGAAGAAGACTATGATTTAGGG GATATAGTTACTATCCAGGATAAGAAATTAAAAGTAACTATGGATAGTAGAATTGTAGAAATACAGGAAGTCTACGGTAA TGATGGTATGAAACTTAAAGCTACTTTTGGTACAAGAATACCAAGCTTACTGGCTGTGTTAAAAAGGATGGTGAAATAA
Upstream 100 bases:
>100_bases TGAATGTGGAGAATTTGAATTTAAAATTAATTCTAATAAACTTCATACGGATAAATTAGTAAAAAATAACTTGATTCTCT TAGGAAAAGATTATAACAAG
Downstream 100 bases:
>100_bases TGGAAAAGAGCTTTGTTTTCAATAGTGTAAATGGGGATAGGAGATATAAAGCAGAAGATTTTAGAGAATACTTTGCAAGC TTTATTGGGAATGGTGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Minor Protein N- Region
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MGLILHREFVYGEGGQETETLLIKGVTLQGLAKRRIIIHDTGQEFDSCIGNQETIMKYFVNRNCVNPTDLNRRIDNLIVA VDKKRGENDRWRGAYESLDEKLKEIGEYSKLGWNIVLDHKQKKFIFDVMQGKNLTVNQNTNPPVIFRSDFNNIKTRHYTE SIINSRNSLYIGSKEKLVLNLGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNSTFVYEEDYDLG DIVTIQDKKLKVTMDSRIVEIQEVYGNDGMKLKATFGTRIPSLLAVLKRMVK
Sequences:
>Translated_292_residues MGLILHREFVYGEGGQETETLLIKGVTLQGLAKRRIIIHDTGQEFDSCIGNQETIMKYFVNRNCVNPTDLNRRIDNLIVA VDKKRGENDRWRGAYESLDEKLKEIGEYSKLGWNIVLDHKQKKFIFDVMQGKNLTVNQNTNPPVIFRSDFNNIKTRHYTE SIINSRNSLYIGSKEKLVLNLGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNSTFVYEEDYDLG DIVTIQDKKLKVTMDSRIVEIQEVYGNDGMKLKATFGTRIPSLLAVLKRMVK >Mature_291_residues GLILHREFVYGEGGQETETLLIKGVTLQGLAKRRIIIHDTGQEFDSCIGNQETIMKYFVNRNCVNPTDLNRRIDNLIVAV DKKRGENDRWRGAYESLDEKLKEIGEYSKLGWNIVLDHKQKKFIFDVMQGKNLTVNQNTNPPVIFRSDFNNIKTRHYTES IINSRNSLYIGSKEKLVLNLGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNSTFVYEEDYDLGD IVTIQDKKLKVTMDSRIVEIQEVYGNDGMKLKATFGTRIPSLLAVLKRMVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33681; Mature: 33550
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLILHREFVYGEGGQETETLLIKGVTLQGLAKRRIIIHDTGQEFDSCIGNQETIMKYFV CCEEEEEEEEECCCCCCCEEEEEECCCHHHHHHCEEEEEECCHHHHHHCCCHHHHHHHHH NRNCVNPTDLNRRIDNLIVAVDKKRGENDRWRGAYESLDEKLKEIGEYSKLGWNIVLDHK CCCCCCHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC QKKFIFDVMQGKNLTVNQNTNPPVIFRSDFNNIKTRHYTESIINSRNSLYIGSKEKLVLN CHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCEEEEE LGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNSTFVYEEDYDLG ECCCCCHHHHHHHHCCCHHHHHHHHHHCCEEHHHHHCCEEEEEEECCCCEEEEECCCCCC DIVTIQDKKLKVTMDSRIVEIQEVYGNDGMKLKATFGTRIPSLLAVLKRMVK CEEEEECCEEEEEECCHHEEEHHHHCCCCCEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure GLILHREFVYGEGGQETETLLIKGVTLQGLAKRRIIIHDTGQEFDSCIGNQETIMKYFV CEEEEEEEEECCCCCCCEEEEEECCCHHHHHHCEEEEEECCHHHHHHCCCHHHHHHHHH NRNCVNPTDLNRRIDNLIVAVDKKRGENDRWRGAYESLDEKLKEIGEYSKLGWNIVLDHK CCCCCCHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC QKKFIFDVMQGKNLTVNQNTNPPVIFRSDFNNIKTRHYTESIINSRNSLYIGSKEKLVLN CHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCEEEEE LGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNSTFVYEEDYDLG ECCCCCHHHHHHHHCCCHHHHHHHHHHCCEEHHHHHCCEEEEEEECCCCEEEEECCCCCC DIVTIQDKKLKVTMDSRIVEIQEVYGNDGMKLKATFGTRIPSLLAVLKRMVK CEEEEECCEEEEEECCHHEEEHHHHCCCCCEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA