Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
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Accession | NC_009697 |
Length | 3,863,450 |
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The map label for this gene is 153932347
Identifier: 153932347
GI number: 153932347
Start: 2563917
End: 2564783
Strand: Reverse
Name: 153932347
Synonym: CLB_2437
Alternate gene names: NA
Gene position: 2564783-2563917 (Counterclockwise)
Preceding gene: 153933375
Following gene: 153930993
Centisome position: 66.39
GC content: 30.91
Gene sequence:
>867_bases TTGCAAAAATTAATATATAGAAATTCTAAAGGACAAGAAGTAACTTTAAGTAACTCTCGTCCTTTTGTTTTGGAAAAGAT AGAAAATGTAGCTAATACAGCAACTAGTATAAATACATCTATAAGTGCGGGACAAGATGGAGTTAGTATAGATAATATAT CTATTAAAGAAAAACTATTGCCTATAACGGGAGGATTAGTAGGTGATAGTTTTGAGGATATAGATAGAAAAAGAGAATAT TTAACAAATATATTTAATCCTAAGTTTCATGGGGAACTTGTTTATACAAATAATGCAACAAGTAGAAAAATTAAAGGAAG AGTGCAAGATATAACCTTTCAAGACAAGGTTGGATCTATTCAAAAATTCTTAGTACAAATTTTAGTTCCCAATCCATTTT GGGAAGATATCTACACTAAAAAAGAAGAAGTGGCCTTATGGGTCGGTGATTTTGAATTTCCTTTAGAAATTCCATCAGAA GGTATAGAAATGGGACATAGAGTTAGCAATTTAATTGTTAATATAAATAATACTGGAGCCGTTCCTTGCGGAATGAGAAT ACAATTTAAAGCACTTGCTACAGTAGTAAATCCTTCATTGTTTAATGTTAATACTAGAGAATTTATAAAAATTAATAGAA CACTTAGTGCTGGGGATGTTTTAGAAGTTACTACGGAGTTTAGTAACAAAAGAATAGAACTTGTAAAAAATAATGGAGTT ACGCAGAATGTCTTCAATTGGATTGATTTAGATTCGGAGTTCTTACAGCTAGAGGTAGGAGATAACTTGTTTAGATATGA TGCGGAAAGTGGTATAGATAATTTAGAGGTAGCAATTTATCATACTTCGCTGTATTTGGGGGTGTAG
Upstream 100 bases:
>100_bases TTTAATGTGTATGCCTCCGGCAATAATGGAGGTAGTAGAAGTATAGAAAGTGAATTAAGAAGTTTAGCCTTTTCTATGGC ATAAGAAGGGAGTATTAGAG
Downstream 100 bases:
>100_bases ATTATTAAGACAGCTAAAATATTAGATAAGGATATAAATCTATTAGGTGTTATAGACAATTATGAAAGCTTTTCTATAAC TAGAAGATTCTTTGAATGTG
Product: putative phage tail protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage-Related Tail Protein; Phage-Related Protein; Tail Protein; Tail Component Family Protein
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MQKLIYRNSKGQEVTLSNSRPFVLEKIENVANTATSINTSISAGQDGVSIDNISIKEKLLPITGGLVGDSFEDIDRKREY LTNIFNPKFHGELVYTNNATSRKIKGRVQDITFQDKVGSIQKFLVQILVPNPFWEDIYTKKEEVALWVGDFEFPLEIPSE GIEMGHRVSNLIVNINNTGAVPCGMRIQFKALATVVNPSLFNVNTREFIKINRTLSAGDVLEVTTEFSNKRIELVKNNGV TQNVFNWIDLDSEFLQLEVGDNLFRYDAESGIDNLEVAIYHTSLYLGV
Sequences:
>Translated_288_residues MQKLIYRNSKGQEVTLSNSRPFVLEKIENVANTATSINTSISAGQDGVSIDNISIKEKLLPITGGLVGDSFEDIDRKREY LTNIFNPKFHGELVYTNNATSRKIKGRVQDITFQDKVGSIQKFLVQILVPNPFWEDIYTKKEEVALWVGDFEFPLEIPSE GIEMGHRVSNLIVNINNTGAVPCGMRIQFKALATVVNPSLFNVNTREFIKINRTLSAGDVLEVTTEFSNKRIELVKNNGV TQNVFNWIDLDSEFLQLEVGDNLFRYDAESGIDNLEVAIYHTSLYLGV >Mature_288_residues MQKLIYRNSKGQEVTLSNSRPFVLEKIENVANTATSINTSISAGQDGVSIDNISIKEKLLPITGGLVGDSFEDIDRKREY LTNIFNPKFHGELVYTNNATSRKIKGRVQDITFQDKVGSIQKFLVQILVPNPFWEDIYTKKEEVALWVGDFEFPLEIPSE GIEMGHRVSNLIVNINNTGAVPCGMRIQFKALATVVNPSLFNVNTREFIKINRTLSAGDVLEVTTEFSNKRIELVKNNGV TQNVFNWIDLDSEFLQLEVGDNLFRYDAESGIDNLEVAIYHTSLYLGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32413; Mature: 32413
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLIYRNSKGQEVTLSNSRPFVLEKIENVANTATSINTSISAGQDGVSIDNISIKEKLL CCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCEEHHHHEE PITGGLVGDSFEDIDRKREYLTNIFNPKFHGELVYTNNATSRKIKGRVQDITFQDKVGSI EECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCCEEEEEEHHHHHHH QKFLVQILVPNPFWEDIYTKKEEVALWVGDFEFPLEIPSEGIEMGHRVSNLIVNINNTGA HHHHHHHHCCCCCHHHHHCCCCCEEEEEECEECCCCCCCHHHHHHHCEEEEEEEECCCCC VPCGMRIQFKALATVVNPSLFNVNTREFIKINRTLSAGDVLEVTTEFSNKRIELVKNNGV CCCCCEEEHHHHHHHHCCCEECCCCHHEEEEECEECCCCEEEEEECCCCCEEEEEECCCC TQNVFNWIDLDSEFLQLEVGDNLFRYDAESGIDNLEVAIYHTSLYLGV CHHHHHHHCCCCEEEEEEECCCEEEECHHCCCCCEEEEEEEEEEEEEC >Mature Secondary Structure MQKLIYRNSKGQEVTLSNSRPFVLEKIENVANTATSINTSISAGQDGVSIDNISIKEKLL CCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCEEHHHHEE PITGGLVGDSFEDIDRKREYLTNIFNPKFHGELVYTNNATSRKIKGRVQDITFQDKVGSI EECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCCEEEEEEHHHHHHH QKFLVQILVPNPFWEDIYTKKEEVALWVGDFEFPLEIPSEGIEMGHRVSNLIVNINNTGA HHHHHHHHCCCCCHHHHHCCCCCEEEEEECEECCCCCCCHHHHHHHCEEEEEEEECCCCC VPCGMRIQFKALATVVNPSLFNVNTREFIKINRTLSAGDVLEVTTEFSNKRIELVKNNGV CCCCCEEEHHHHHHHHCCCEECCCCHHEEEEECEECCCCEEEEEECCCCCEEEEEECCCC TQNVFNWIDLDSEFLQLEVGDNLFRYDAESGIDNLEVAIYHTSLYLGV CHHHHHHHCCCCEEEEEEECCCEEEECHHCCCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA