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The map label for this gene is yvaP [H]

Identifier: 152977404

GI number: 152977404

Start: 3788663

End: 3788977

Strand: Reverse

Name: yvaP [H]

Synonym: Bcer98_3732

Alternate gene names: 152977404

Gene position: 3788977-3788663 (Counterclockwise)

Preceding gene: 152977405

Following gene: 152977403

Centisome position: 92.71

GC content: 39.68

Gene sequence:

>315_bases
ATGGAGCATAATTCTTGCTTATGTCCAAAGTTCGAGTCGGCCTTCACACTGCTTAGTAAGAAGTGGACGGGGTTAATTAT
TAAATCTTTATTAGAAGAGCCGAAGCGTTTTAGAGAAATCGCTGATATTATCCCGAATATGAGCGATCGTATGTTGTCAG
AGCGTCTAAAGGAATTAGAAAGCGAAGGCATTGTTGTTCGTAATGTGTATCCAGAAGTACCTGTCCGAATTGAATACGGA
CTAACTGATAAAGGAAAAGCACTGGAGAGTGTTATGAACGAGGTTCAAAATTGGGCTGAAAAATGGGTGAAATAA

Upstream 100 bases:

>100_bases
ATATTTAGGAATGATAAAATGTACATAATTTAAAATGAAGAAAGTTTTATTGCTTACTTTTTATAAGAAACTATATTACA
ATAAAAGAGAGGTGAAACAT

Downstream 100 bases:

>100_bases
AAGTAAGTTAAGTAATGCTTTGTATACTGGAAAAAACGTAGGGCGATCCTACGTTTTTTCTGTAACAAATAGATGACAAT
TATATAAAAAAACGATGTTT

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MEHNSCLCPKFESAFTLLSKKWTGLIIKSLLEEPKRFREIADIIPNMSDRMLSERLKELESEGIVVRNVYPEVPVRIEYG
LTDKGKALESVMNEVQNWAEKWVK

Sequences:

>Translated_104_residues
MEHNSCLCPKFESAFTLLSKKWTGLIIKSLLEEPKRFREIADIIPNMSDRMLSERLKELESEGIVVRNVYPEVPVRIEYG
LTDKGKALESVMNEVQNWAEKWVK
>Mature_104_residues
MEHNSCLCPKFESAFTLLSKKWTGLIIKSLLEEPKRFREIADIIPNMSDRMLSERLKELESEGIVVRNVYPEVPVRIEYG
LTDKGKALESVMNEVQNWAEKWVK

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12111; Mature: 12111

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHNSCLCPKFESAFTLLSKKWTGLIIKSLLEEPKRFREIADIIPNMSDRMLSERLKELE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SEGIVVRNVYPEVPVRIEYGLTDKGKALESVMNEVQNWAEKWVK
HCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEHNSCLCPKFESAFTLLSKKWTGLIIKSLLEEPKRFREIADIIPNMSDRMLSERLKELE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SEGIVVRNVYPEVPVRIEYGLTDKGKALESVMNEVQNWAEKWVK
HCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]