Click here to switch to the map view.

The map label for this gene is cccA [H]

Identifier: 152977396

GI number: 152977396

Start: 3778386

End: 3778724

Strand: Reverse

Name: cccA [H]

Synonym: Bcer98_3724

Alternate gene names: 152977396

Gene position: 3778724-3778386 (Counterclockwise)

Preceding gene: 152977397

Following gene: 152977395

Centisome position: 92.46

GC content: 40.71

Gene sequence:

>339_bases
ATGGGAGCGATAGAGTTGAAAAAAAAACTGTTGGCTGTTGTCTTAGGAACATCATTGGTTTTTGCCCTAGGGGCATGCGG
AAAGAAGGAGGAAGAGAAATCTTCTAATCAATCTGCAAGCACTGATACTGCAGAACAAATTTTCCAAAAGAGTTGTGCAG
GTTGTCATGCGAAGGATTTATCTGGAGCAACTGGACCTGATTTAAGAAAAGTAGGCGATAAATATGATGCCGCTGATATT
GAAGATATTATTAAAAAGGGCCGCGGATCAATGTCACCGGGATTGATTCAAGGTGAAGATGCAAAAAAAGTAGCGGAATG
GTTGGCAGAGCATAAATAA

Upstream 100 bases:

>100_bases
TTAAAATTATTCTATGTAGATTCGTTTTTCTTCATTTGGATTATGATTATAATGACAGATGAGTGCATAAGTGCATATGA
AAGATAAATAAATATGAATA

Downstream 100 bases:

>100_bases
GAAATGAGTTACTGAGGAGACAATTGAGAAACCGAGCAGACTTAAACTTTCATCAGATTATTTTTTTATGTATGAAACGA
GAGTTTGCTCGGGTTTTTTG

Product: cytochrome c-551

Products: NA

Alternate protein names: Cytochrome c551 [H]

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MGAIELKKKLLAVVLGTSLVFALGACGKKEEEKSSNQSASTDTAEQIFQKSCAGCHAKDLSGATGPDLRKVGDKYDAADI
EDIIKKGRGSMSPGLIQGEDAKKVAEWLAEHK

Sequences:

>Translated_112_residues
MGAIELKKKLLAVVLGTSLVFALGACGKKEEEKSSNQSASTDTAEQIFQKSCAGCHAKDLSGATGPDLRKVGDKYDAADI
EDIIKKGRGSMSPGLIQGEDAKKVAEWLAEHK
>Mature_111_residues
GAIELKKKLLAVVLGTSLVFALGACGKKEEEKSSNQSASTDTAEQIFQKSCAGCHAKDLSGATGPDLRKVGDKYDAADIE
DIIKKGRGSMSPGLIQGEDAKKVAEWLAEHK

Specific function: Appears to mediate electron flow from the cytochrome b6f complex to an alternative terminal oxidase [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012218
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11821; Mature: 11689

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAIELKKKLLAVVLGTSLVFALGACGKKEEEKSSNQSASTDTAEQIFQKSCAGCHAKDL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
SGATGPDLRKVGDKYDAADIEDIIKKGRGSMSPGLIQGEDAKKVAEWLAEHK
CCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
GAIELKKKLLAVVLGTSLVFALGACGKKEEEKSSNQSASTDTAEQIFQKSCAGCHAKDL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
SGATGPDLRKVGDKYDAADIEDIIKKGRGSMSPGLIQGEDAKKVAEWLAEHK
CCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7916623 [H]