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The map label for this gene is whiA [H]

Identifier: 152977371

GI number: 152977371

Start: 3751740

End: 3752690

Strand: Reverse

Name: whiA [H]

Synonym: Bcer98_3696

Alternate gene names: 152977371

Gene position: 3752690-3751740 (Counterclockwise)

Preceding gene: 152977372

Following gene: 152977370

Centisome position: 91.82

GC content: 34.38

Gene sequence:

>951_bases
GTGTCATTTGCTTCGGAAACAAAGAAAGAGCTCACAAAGCTTGAAATGAAAGAATGCTGTGAGAAAGCTGAGTTATCAGC
ATTACTTCGAATGAACGGGTCGCTTTCTTTTTCAAATCGTCGTCTATCCATAGATATTCAAACGGAAAACGCAGCAATTG
CGCGAAGGATTTATACACTTTTGAAAAAGGGCTATAACGTAACGGTAGAACTACTTGTTCGAAAAAAAATGCGATTAAAG
AAAAATAATGTCTATATCGTTCGGCTTGTTGAAAAATCACGCGAAATTTTAGCAGATCTTCAAATTGTTCGAGAGGACTT
TTCGTTTATCCGCAATATATCACAAGAATTAATTGAGAAGAAATGTTGTAAAAGATCGTATTTACGAGGAGCATTTTTAG
CAGGTGGTTCAGTAAATAACCCAGAAACATCATCTTATCATTTAGAAATCTTTTCGTTATATAAGGAACATAATGATTCT
ATATGTGAATTGATGAATGGATTTGATTTAAATAGTAAGACGTTGGAAAGGCGAAAAGGTTATATTACGTATTTAAAAGA
GGCAGAGAAAATTACGGAATTTTTAAATATTATTGGCGCGCATAATGCACTCTTAAAATTTGAAGATATTCGTATTGTTC
GCGATATGCGTAATTCCGTTAATCGCTTAGTAAATTGTGAAACAGCTAATCTCAACAAGACAATTGGTGCGGCATTAAGG
CAAATTGAAAATATTCGCTACATTGATGAGACGGTTGGCCTTGATATTTTGCCAGACAAATTAAGAGAGATTGCACAACT
AAGAGTTAATTATCAAGATGTAACATTGAAAGAATTAGGCGAGATGGTATCTGGAGGGAAAATTAGTAAATCAGGTATCA
ATCATCGTTTGCGTAAAATCGACGAAATTGCGGAGAAATTACGTGCGGGGGAAACAGTAGTAAAAAAATAA

Upstream 100 bases:

>100_bases
TTCATTGTTATAAATGTGCGTTGCCTCGTTTGAGGTAACGCTCCTCATTCATATAGGACAAGATTTTTGTTCCAAAATAT
TGTATAAGGAGGTGTTGACT

Downstream 100 bases:

>100_bases
AGGTAAAGGGGAAATGGAGCCGTGGTTCAAAAAAAAGTTGAGGTTGCACGAAAAGATGGTTTGCAAGCACGTCCGGCTGC
GTTGTTTGTGCAAGAGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSFASETKKELTKLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYNVTVELLVRKKMRLK
KNNVYIVRLVEKSREILADLQIVREDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDS
ICELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLKFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALR
QIENIRYIDETVGLDILPDKLREIAQLRVNYQDVTLKELGEMVSGGKISKSGINHRLRKIDEIAEKLRAGETVVKK

Sequences:

>Translated_316_residues
MSFASETKKELTKLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYNVTVELLVRKKMRLK
KNNVYIVRLVEKSREILADLQIVREDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDS
ICELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLKFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALR
QIENIRYIDETVGLDILPDKLREIAQLRVNYQDVTLKELGEMVSGGKISKSGINHRLRKIDEIAEKLRAGETVVKK
>Mature_315_residues
SFASETKKELTKLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYNVTVELLVRKKMRLKK
NNVYIVRLVEKSREILADLQIVREDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDSI
CELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLKFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALRQ
IENIRYIDETVGLDILPDKLREIAQLRVNYQDVTLKELGEMVSGGKISKSGINHRLRKIDEIAEKLRAGETVVKK

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 36357; Mature: 36226

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFASETKKELTKLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHH
LKKGYNVTVELLVRKKMRLKKNNVYIVRLVEKSREILADLQIVREDFSFIRNISQELIEK
HHCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDSICELMNGFDLNSKTLERRKG
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCC
YITYLKEAEKITEFLNIIGAHNALLKFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QIENIRYIDETVGLDILPDKLREIAQLRVNYQDVTLKELGEMVSGGKISKSGINHRLRKI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
DEIAEKLRAGETVVKK
HHHHHHHHCCHHHHCC
>Mature Secondary Structure 
SFASETKKELTKLEMKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHH
LKKGYNVTVELLVRKKMRLKKNNVYIVRLVEKSREILADLQIVREDFSFIRNISQELIEK
HHCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDSICELMNGFDLNSKTLERRKG
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCC
YITYLKEAEKITEFLNIIGAHNALLKFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QIENIRYIDETVGLDILPDKLREIAQLRVNYQDVTLKELGEMVSGGKISKSGINHRLRKI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
DEIAEKLRAGETVVKK
HHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA