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The map label for this gene is yvcK [H]

Identifier: 152977372

GI number: 152977372

Start: 3752778

End: 3753731

Strand: Reverse

Name: yvcK [H]

Synonym: Bcer98_3697

Alternate gene names: 152977372

Gene position: 3753731-3752778 (Counterclockwise)

Preceding gene: 152977373

Following gene: 152977371

Centisome position: 91.85

GC content: 38.89

Gene sequence:

>954_bases
ATGAAAAAAGAGAGAAAACCTAAAATTGTCATCATGGGAGGAGGAACTGGACTTTCTGTTTTATTAAGAGGATTAAAGCA
ATATCCTGTTGATATTACAGCAGTTGTTACAATCGCTGATGATGGTGGCAGTTCGGGTAGGTTACGTGATGAGCTAGAAA
TTCCACCCCCTGGTGACATTCGTAACGTACTTGTTGCGTTATCGGATGTAGAGCCACTGGTGGAAGCTTTATTTCAGCAT
CGTTTTACAACAGGAGACGGACTGAAGGGTCATGCGTTAGGAAATCTATTATTGGCAGGTATGACCGCGATTACAGGAGA
CTTTTTCCATGCGATTACAGAAACGAGTAAAGTATTAAATGTTAGAGGACGTGTATTACCAGCAGCGAATCAAAGCGCCG
TACTTCATGCGGAACTAGAAGATGGAGAAGTTGTAACAGGTGAATCAAAAATTCCTTATTACGGAAAGAAGATTAACCGT
GTCTTTTTAACTCCAGAAGATGTAGAGCCATTGCATGAGACGTTAGCTGAGATTAAACGAGCTGATTTACTTGTTTTCGG
TCCGGGAAGTTTGTATACGAGTATATTGCCGAATTTAGTTGTTAACAAAATTGGGGACGCTGTTCTTGCTGCAAAAGCGA
AGAAGGTATATGTATGTAATGTTATGACACAAGCCGGTGAGACAATGGGATATACTGCTTTTGATCATGTCCAGGCGTTA
CATGATCATTTAGGACAACCATTTATCGATACTGCAATTGTGAATAACCGTGATATTCCCTGTGAATTACGTAAGTTATA
TGAGAAAGAAATGTCTGCCCCAGTTGTAGTGGATGAAGAACGTTTTACTGAAAATAATATTGAGGTTATTCCAGCCCAAT
TAGCGAAATATGATAATCATGTTGTAAGACATGATACGTTAAAGCTAGCTTCTATTTTATATTCATTGTTATAA

Upstream 100 bases:

>100_bases
TTCTGTTACGCTTGCAGAGTACCTTGGGAAACATTTGAAACCAGATTATAGTGTTCATGTATCTCATCGTGATGTGGAGA
AGAGAAAGGGCCATTAAAGG

Downstream 100 bases:

>100_bases
ATGTGCGTTGCCTCGTTTGAGGTAACGCTCCTCATTCATATAGGACAAGATTTTTGTTCCAAAATATTGTATAAGGAGGT
GTTGACTGTGTCATTTGCTT

Product: protein of unknown function UPF0052 and CofD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKKERKPKIVIMGGGTGLSVLLRGLKQYPVDITAVVTIADDGGSSGRLRDELEIPPPGDIRNVLVALSDVEPLVEALFQH
RFTTGDGLKGHALGNLLLAGMTAITGDFFHAITETSKVLNVRGRVLPAANQSAVLHAELEDGEVVTGESKIPYYGKKINR
VFLTPEDVEPLHETLAEIKRADLLVFGPGSLYTSILPNLVVNKIGDAVLAAKAKKVYVCNVMTQAGETMGYTAFDHVQAL
HDHLGQPFIDTAIVNNRDIPCELRKLYEKEMSAPVVVDEERFTENNIEVIPAQLAKYDNHVVRHDTLKLASILYSLL

Sequences:

>Translated_317_residues
MKKERKPKIVIMGGGTGLSVLLRGLKQYPVDITAVVTIADDGGSSGRLRDELEIPPPGDIRNVLVALSDVEPLVEALFQH
RFTTGDGLKGHALGNLLLAGMTAITGDFFHAITETSKVLNVRGRVLPAANQSAVLHAELEDGEVVTGESKIPYYGKKINR
VFLTPEDVEPLHETLAEIKRADLLVFGPGSLYTSILPNLVVNKIGDAVLAAKAKKVYVCNVMTQAGETMGYTAFDHVQAL
HDHLGQPFIDTAIVNNRDIPCELRKLYEKEMSAPVVVDEERFTENNIEVIPAQLAKYDNHVVRHDTLKLASILYSLL
>Mature_317_residues
MKKERKPKIVIMGGGTGLSVLLRGLKQYPVDITAVVTIADDGGSSGRLRDELEIPPPGDIRNVLVALSDVEPLVEALFQH
RFTTGDGLKGHALGNLLLAGMTAITGDFFHAITETSKVLNVRGRVLPAANQSAVLHAELEDGEVVTGESKIPYYGKKINR
VFLTPEDVEPLHETLAEIKRADLLVFGPGSLYTSILPNLVVNKIGDAVLAAKAKKVYVCNVMTQAGETMGYTAFDHVQAL
HDHLGQPFIDTAIVNNRDIPCELRKLYEKEMSAPVVVDEERFTENNIEVIPAQLAKYDNHVVRHDTLKLASILYSLL

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=248, Percent_Identity=31.8548387096774, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 34622; Mature: 34622

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKERKPKIVIMGGGTGLSVLLRGLKQYPVDITAVVTIADDGGSSGRLRDELEIPPPGDI
CCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHH
RNVLVALSDVEPLVEALFQHRFTTGDGLKGHALGNLLLAGMTAITGDFFHAITETSKVLN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRGRVLPAANQSAVLHAELEDGEVVTGESKIPYYGKKINRVFLTPEDVEPLHETLAEIKR
CCCCEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
ADLLVFGPGSLYTSILPNLVVNKIGDAVLAAKAKKVYVCNVMTQAGETMGYTAFDHVQAL
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHHHHHH
HDHLGQPFIDTAIVNNRDIPCELRKLYEKEMSAPVVVDEERFTENNIEVIPAQLAKYDNH
HHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCEEECHHHCCCCCCEEEHHHHHHCCCC
VVRHDTLKLASILYSLL
CHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKKERKPKIVIMGGGTGLSVLLRGLKQYPVDITAVVTIADDGGSSGRLRDELEIPPPGDI
CCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHH
RNVLVALSDVEPLVEALFQHRFTTGDGLKGHALGNLLLAGMTAITGDFFHAITETSKVLN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRGRVLPAANQSAVLHAELEDGEVVTGESKIPYYGKKINRVFLTPEDVEPLHETLAEIKR
CCCCEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
ADLLVFGPGSLYTSILPNLVVNKIGDAVLAAKAKKVYVCNVMTQAGETMGYTAFDHVQAL
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHHHHHH
HDHLGQPFIDTAIVNNRDIPCELRKLYEKEMSAPVVVDEERFTENNIEVIPAQLAKYDNH
HHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCEEECHHHCCCCCCEEEHHHHHHCCCC
VVRHDTLKLASILYSLL
CHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]