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The map label for this gene is yxaC [H]

Identifier: 152977351

GI number: 152977351

Start: 3735883

End: 3736575

Strand: Reverse

Name: yxaC [H]

Synonym: Bcer98_3676

Alternate gene names: 152977351

Gene position: 3736575-3735883 (Counterclockwise)

Preceding gene: 152977352

Following gene: 152977350

Centisome position: 91.43

GC content: 38.96

Gene sequence:

>693_bases
ATGAGTAGTATATTAATCGGGATTGGTTGGGTTCTTCTGACAGTGTTCATATATCAATTATCTAAAATGATTTATAAGAT
ATTGCCAACGCCGTTTACGATTCCAATGATTATCGCAACAGTACTCATGATTATTTTATTAATGATGTTGGATGTACCGT
ATCAACAATACATGCAAAGTGGCGGGGGCTGGATTTCTAAATTACTTGGACCAGGTGTTGTAGCATTTGCAATTCCGCTC
TATAAACAGCGCCATGTACTTCGAAAATATGTTGTGCCGATTGCTGGTGGTGTTATTGTGGGAACAACGGTTGCGATTGC
AAGTGACTTTATTATTGCGTCGCTGATGGGAACAGATAAAAGTTTAATTTTATCTTCTTTACCAAAATCAGTAACAATGC
CAGTTGCTATGAGCGTATCAGAACAAGTTGGTGGTGTGCCATCATTAACAGCAGCGTTCGTTGTTGTTGCTGGAATCAGT
GGGACGATTACAGGGCCTTTTTTATTGAAATGGAGCCGTGTGACAAATTCGGTTGGTAAAGGAATTGGATTTGGCTGTGC
TTCACATATTATGGGCGTTATGAGAGCGATGAAAAATAATGAGAGTGAAGGTGTTATTGGATCGGTAACAATGACATTAA
CGGCTATTTTAACGTGCTTACTGGGACCTTTATTTGCAATGATGCTTGTATAA

Upstream 100 bases:

>100_bases
TTTCTCTTTTCATTACAGTTGTAGCGAGCACATTTTTAATTATTATTGTCGCAGGACATACAGGACAATATCTTGCGACT
AGAAAGGAAAAAGAGACAAG

Downstream 100 bases:

>100_bases
TATAGAAAAGCGAGAGCAAGCGAACGGCTCTCGCTTTTCTGTACAATTTATGCTACAGTTAAACTAACTGAATCTTGTAG
GAGGTACGCTAAGATGCATA

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSSILIGIGWVLLTVFIYQLSKMIYKILPTPFTIPMIIATVLMIILLMMLDVPYQQYMQSGGGWISKLLGPGVVAFAIPL
YKQRHVLRKYVVPIAGGVIVGTTVAIASDFIIASLMGTDKSLILSSLPKSVTMPVAMSVSEQVGGVPSLTAAFVVVAGIS
GTITGPFLLKWSRVTNSVGKGIGFGCASHIMGVMRAMKNNESEGVIGSVTMTLTAILTCLLGPLFAMMLV

Sequences:

>Translated_230_residues
MSSILIGIGWVLLTVFIYQLSKMIYKILPTPFTIPMIIATVLMIILLMMLDVPYQQYMQSGGGWISKLLGPGVVAFAIPL
YKQRHVLRKYVVPIAGGVIVGTTVAIASDFIIASLMGTDKSLILSSLPKSVTMPVAMSVSEQVGGVPSLTAAFVVVAGIS
GTITGPFLLKWSRVTNSVGKGIGFGCASHIMGVMRAMKNNESEGVIGSVTMTLTAILTCLLGPLFAMMLV
>Mature_229_residues
SSILIGIGWVLLTVFIYQLSKMIYKILPTPFTIPMIIATVLMIILLMMLDVPYQQYMQSGGGWISKLLGPGVVAFAIPLY
KQRHVLRKYVVPIAGGVIVGTTVAIASDFIIASLMGTDKSLILSSLPKSVTMPVAMSVSEQVGGVPSLTAAFVVVAGISG
TITGPFLLKWSRVTNSVGKGIGFGCASHIMGVMRAMKNNESEGVIGSVTMTLTAILTCLLGPLFAMMLV

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=225, Percent_Identity=34.2222222222222, Blast_Score=124, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24372; Mature: 24241

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSILIGIGWVLLTVFIYQLSKMIYKILPTPFTIPMIIATVLMIILLMMLDVPYQQYMQS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHC
GGGWISKLLGPGVVAFAIPLYKQRHVLRKYVVPIAGGVIVGTTVAIASDFIIASLMGTDK
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH
SLILSSLPKSVTMPVAMSVSEQVGGVPSLTAAFVVVAGISGTITGPFLLKWSRVTNSVGK
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
GIGFGCASHIMGVMRAMKNNESEGVIGSVTMTLTAILTCLLGPLFAMMLV
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SSILIGIGWVLLTVFIYQLSKMIYKILPTPFTIPMIIATVLMIILLMMLDVPYQQYMQS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHC
GGGWISKLLGPGVVAFAIPLYKQRHVLRKYVVPIAGGVIVGTTVAIASDFIIASLMGTDK
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH
SLILSSLPKSVTMPVAMSVSEQVGGVPSLTAAFVVVAGISGTITGPFLLKWSRVTNSVGK
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
GIGFGCASHIMGVMRAMKNNESEGVIGSVTMTLTAILTCLLGPLFAMMLV
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]