Definition | Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome. |
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Accession | NC_009674 |
Length | 4,087,024 |
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The map label for this gene is nupC [H]
Identifier: 152977316
GI number: 152977316
Start: 3700063
End: 3701244
Strand: Reverse
Name: nupC [H]
Synonym: Bcer98_3641
Alternate gene names: 152977316
Gene position: 3701244-3700063 (Counterclockwise)
Preceding gene: 152977317
Following gene: 152977315
Centisome position: 90.56
GC content: 35.53
Gene sequence:
>1182_bases ATGAAGTTTGTTATGTTTCTTGTAGGATTACTCGTTGTATTTATACTTGGTTTTCTTATAAGTACAGACCGAAAGAAAAT TAAGTATAAACCAATTGTGGTGATGCTTATGGTTCAATTGGCATTATCGTACTTCCTATTAAGTACACAGATTGGGTATA TTTTAGTAAAAGGAATTTCTGATGGATTTGGCGCCTTGCTCACATATGCTGAATCTGGAATCGTTTTCGTATTTGGGGGT CTTGTGAATAAGGGGGAAACCACATTCTTCCTCACAGCGTTATTACCAATTGTATTCTTCGCTGTATTAATTGGGATTTT GCAGCACTTCAAGATTTTACCACTGTTCATTCGCTCTGTTGGTTTTCTATTGAGTAAAGTAAATGGTTTAGGAAAACTAG AATCCTATAATGCAGTAGCAGCTGCAATCGTTGGTCAAGCAGAAGTATTTATTACGGTAAAAGATCAATTAAGTAAAATT CCAAAGCATCGTTTATATACACTTTGTGCATCTTCTATGTCAACAGTATCGATGTCAATTGTTGGTTCTTATATGAAAAT GATTGAGCCGAAATATGTAGTCACAGCACTTGTATTAAACTTATTTAGTGGATTCATTATCGTTCATATTATTAATCCGT ATGATATTACAGAAGAAGAAAATACGTTAAAATTAGAAAATAAAAAGAAGCAGTCATTCTTTGAAATGTTAGGCGAATAT ATTATGCTTGGCTTTACAATTGCAGTAACAGTAGCGGCAATGTTACTTGGTTTCGTAGCATTAATTACAGCCATTAATAG CTTGTTCGATGCGATTTTTGGAATGACATTCCAAGCTATTTTAGGATATATTTTCTCTCCTCTTGCATTTGTAATGGGCA TTCCGAAATCAGAAGTGGTAACAGCGGGTCAAATTATGGCAACAAAATTAGTGTCAAATGAGTTTGTCGCGATGCTTGAC CTTGGCAAAGTGGGAGGGGAATTATCTGCTCGCACAGTCGGTATTCTTTCGGTATTCCTTGTATCTTTTGCGAACTTTTC ATCTATTGGCATTATCGCAGGAGCAACGAAAGGAATTGACGAAAATCAATCAAATGTTGTGTCGTCGTTCGGATTACGCC TTGTATATGGCGCAACTTTAGTGAGTGTTTTATCAGCGATTATTGTTGGCGTAATGTTATAA
Upstream 100 bases:
>100_bases AAATAAAAGTTCGGATTATTGATTGTTTTGTATGGTCAGACATTCAATGTTTAATAATTTACTAAAATGTTGAATAAGTT TTAAACGGAGGATTTTATAT
Downstream 100 bases:
>100_bases AAGTTAAAAGCAGTGAGCGTAAACTCACTGCTTTTGTTTATAAGGGAAAAATTATGTTGCATTTCTGTTAGATAACGCTT ACAATTTGTATTGTAGGTGG
Product: Na+ dependent nucleoside transporter
Products: uridine [Cytoplasm]; thymidine [Cytoplasm]; inosine [Cytoplasm]; Deoxyuridine [Cytoplasm]; deoxyinosine [Cytoplasm]; deoxycytidine [Cytoplasm]; deoxyadenosine [Cytoplasm]; cytidine [Cytoplasm]; Proton [Cytoplasm]; adenosine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MKFVMFLVGLLVVFILGFLISTDRKKIKYKPIVVMLMVQLALSYFLLSTQIGYILVKGISDGFGALLTYAESGIVFVFGG LVNKGETTFFLTALLPIVFFAVLIGILQHFKILPLFIRSVGFLLSKVNGLGKLESYNAVAAAIVGQAEVFITVKDQLSKI PKHRLYTLCASSMSTVSMSIVGSYMKMIEPKYVVTALVLNLFSGFIIVHIINPYDITEEENTLKLENKKKQSFFEMLGEY IMLGFTIAVTVAAMLLGFVALITAINSLFDAIFGMTFQAILGYIFSPLAFVMGIPKSEVVTAGQIMATKLVSNEFVAMLD LGKVGGELSARTVGILSVFLVSFANFSSIGIIAGATKGIDENQSNVVSSFGLRLVYGATLVSVLSAIIVGVML
Sequences:
>Translated_393_residues MKFVMFLVGLLVVFILGFLISTDRKKIKYKPIVVMLMVQLALSYFLLSTQIGYILVKGISDGFGALLTYAESGIVFVFGG LVNKGETTFFLTALLPIVFFAVLIGILQHFKILPLFIRSVGFLLSKVNGLGKLESYNAVAAAIVGQAEVFITVKDQLSKI PKHRLYTLCASSMSTVSMSIVGSYMKMIEPKYVVTALVLNLFSGFIIVHIINPYDITEEENTLKLENKKKQSFFEMLGEY IMLGFTIAVTVAAMLLGFVALITAINSLFDAIFGMTFQAILGYIFSPLAFVMGIPKSEVVTAGQIMATKLVSNEFVAMLD LGKVGGELSARTVGILSVFLVSFANFSSIGIIAGATKGIDENQSNVVSSFGLRLVYGATLVSVLSAIIVGVML >Mature_393_residues MKFVMFLVGLLVVFILGFLISTDRKKIKYKPIVVMLMVQLALSYFLLSTQIGYILVKGISDGFGALLTYAESGIVFVFGG LVNKGETTFFLTALLPIVFFAVLIGILQHFKILPLFIRSVGFLLSKVNGLGKLESYNAVAAAIVGQAEVFITVKDQLSKI PKHRLYTLCASSMSTVSMSIVGSYMKMIEPKYVVTALVLNLFSGFIIVHIINPYDITEEENTLKLENKKKQSFFEMLGEY IMLGFTIAVTVAAMLLGFVALITAINSLFDAIFGMTFQAILGYIFSPLAFVMGIPKSEVVTAGQIMATKLVSNEFVAMLD LGKVGGELSARTVGILSVFLVSFANFSSIGIIAGATKGIDENQSNVVSSFGLRLVYGATLVSVLSAIIVGVML
Specific function: Transports Nucleosides With A High Affinity Except Guanosine And Deoxyguanosine. Driven By A Proton Motive Force. [C]
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI11545853, Length=412, Percent_Identity=26.2135922330097, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI42542381, Length=411, Percent_Identity=24.8175182481752, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI227116277, Length=410, Percent_Identity=22.9268292682927, Blast_Score=105, Evalue=9e-23, Organism=Escherichia coli, GI1788737, Length=398, Percent_Identity=57.5376884422111, Blast_Score=454, Evalue=1e-129, Organism=Escherichia coli, GI1788485, Length=410, Percent_Identity=29.5121951219512, Blast_Score=176, Evalue=3e-45, Organism=Escherichia coli, GI1788488, Length=413, Percent_Identity=30.2663438256659, Blast_Score=169, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17560276, Length=397, Percent_Identity=25.9445843828715, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71991794, Length=392, Percent_Identity=23.2142857142857, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI45552519, Length=402, Percent_Identity=25.3731343283582, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI45552517, Length=402, Percent_Identity=25.3731343283582, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI19921868, Length=402, Percent_Identity=25.3731343283582, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI281360430, Length=400, Percent_Identity=23.5, Blast_Score=108, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 42554; Mature: 42554
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVMFLVGLLVVFILGFLISTDRKKIKYKPIVVMLMVQLALSYFLLSTQIGYILVKGIS CHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC DGFGALLTYAESGIVFVFGGLVNKGETTFFLTALLPIVFFAVLIGILQHFKILPLFIRSV CHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFLLSKVNGLGKLESYNAVAAAIVGQAEVFITVKDQLSKIPKHRLYTLCASSMSTVSMSI HHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHH VGSYMKMIEPKYVVTALVLNLFSGFIIVHIINPYDITEEENTLKLENKKKQSFFEMLGEY HHHHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHH IMLGFTIAVTVAAMLLGFVALITAINSLFDAIFGMTFQAILGYIFSPLAFVMGIPKSEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TAGQIMATKLVSNEFVAMLDLGKVGGELSARTVGILSVFLVSFANFSSIGIIAGATKGID HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC ENQSNVVSSFGLRLVYGATLVSVLSAIIVGVML CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFVMFLVGLLVVFILGFLISTDRKKIKYKPIVVMLMVQLALSYFLLSTQIGYILVKGIS CHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC DGFGALLTYAESGIVFVFGGLVNKGETTFFLTALLPIVFFAVLIGILQHFKILPLFIRSV CHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFLLSKVNGLGKLESYNAVAAAIVGQAEVFITVKDQLSKIPKHRLYTLCASSMSTVSMSI HHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHH VGSYMKMIEPKYVVTALVLNLFSGFIIVHIINPYDITEEENTLKLENKKKQSFFEMLGEY HHHHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHH IMLGFTIAVTVAAMLLGFVALITAINSLFDAIFGMTFQAILGYIFSPLAFVMGIPKSEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TAGQIMATKLVSNEFVAMLDLGKVGGELSARTVGILSVFLVSFANFSSIGIIAGATKGID HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC ENQSNVVSSFGLRLVYGATLVSVLSAIIVGVML CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: uridine [Periplasm]; thymidine [Periplasm]; inosine [Periplasm]; Deoxyuridine [Periplasm]; deoxyinosine [Periplasm]; deoxycytidine [Periplasm]; deoxyadenosine [Periplasm]; cytidine [Periplasm]; Proton [Periplasm]; adenosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + uridine [Periplasm] = Proton [Cytoplasm] + uridine [Cytoplasm] Proton [Periplasm] + thymidine [Periplasm] = Proton [Cytoplasm] + thymidine [Cytoplasm] Proton [Periplasm] + inosine [Periplasm] = Proton [Cytoplasm] + inosine [Cytoplasm]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8550462; 8867804; 9384377 [H]