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The map label for this gene is yfiK [H]

Identifier: 152974058

GI number: 152974058

Start: 225670

End: 226332

Strand: Direct

Name: yfiK [H]

Synonym: Bcer98_0214

Alternate gene names: 152974058

Gene position: 225670-226332 (Clockwise)

Preceding gene: 152974057

Following gene: 152974059

Centisome position: 5.52

GC content: 36.95

Gene sequence:

>663_bases
ATGATTCGTATTATGATTGTGGACGATCAGCCATTGATTCGTGACGGTTTAGCAATGTTATTAAACTTGCGCCCAGAACT
TGAGGTGGTAGGGACAGCAAGTGATGGGGATGAAGTTGTTGAGAAAATAGAAAAACTGCAACCTGAAATTATTTTGATGG
ATATTCGAATGCCTCGAGTAAATGGGGTGGAAGGAACAAGATTGGTAAGGGGAAAATTTCCAGAAGTCAAAGTACTTATG
TTAACGACGTTTAATGATAGTGAACTTATTTTTGAGGCGTTAGAACAAGGTGCAAGTGGTTATTTATTGAAGGATATGGA
GACAGATGCGATTGTTCAAGCAATATTAACAGTCCATGGCGGAGGTGCTGTTCTTCCGCAAGATATAACAGCGCAAATTG
TAAAGGAATTAAAAAGAACAAAAGTTGTAGACACATCAGAACAAAGTGTTCCAAATCAAATAGAACAATTAACAGAACGT
GAAATAGATGTATTAAGGGAAATCGGCCTTGGACTTAATAATAAAGAGATTGCTGAAAAGTTGTTTATTACAGAGGGTAC
TGTAAAAAATCATGTTTCCAACTTAATTGGTAAGTTAGAGCTTAGAGATCGGACGCAAGCAGCTATATATGCAGTGAGAT
ATGGTATTACTACATACACATGA

Upstream 100 bases:

>100_bases
ATGGAGGAGTAATTCGGTTTGAAAGTGAGATAGAGAAGGGATTTCGGCTAAAAGCTGAGTTCCCGTTAAAAGAAAAAACA
TGGGTAATAGGAGGAACGAA

Downstream 100 bases:

>100_bases
CTTTTAGCATAGAGAAATCGAAAAAAGTAGCCAATGATGCTGCTTTTTTATTTTACATTTCTATCTGAGGAAGGATGGAA
GAGAGGGGGCATTTTTTTAC

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MIRIMIVDDQPLIRDGLAMLLNLRPELEVVGTASDGDEVVEKIEKLQPEIILMDIRMPRVNGVEGTRLVRGKFPEVKVLM
LTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHGGGAVLPQDITAQIVKELKRTKVVDTSEQSVPNQIEQLTER
EIDVLREIGLGLNNKEIAEKLFITEGTVKNHVSNLIGKLELRDRTQAAIYAVRYGITTYT

Sequences:

>Translated_220_residues
MIRIMIVDDQPLIRDGLAMLLNLRPELEVVGTASDGDEVVEKIEKLQPEIILMDIRMPRVNGVEGTRLVRGKFPEVKVLM
LTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHGGGAVLPQDITAQIVKELKRTKVVDTSEQSVPNQIEQLTER
EIDVLREIGLGLNNKEIAEKLFITEGTVKNHVSNLIGKLELRDRTQAAIYAVRYGITTYT
>Mature_220_residues
MIRIMIVDDQPLIRDGLAMLLNLRPELEVVGTASDGDEVVEKIEKLQPEIILMDIRMPRVNGVEGTRLVRGKFPEVKVLM
LTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHGGGAVLPQDITAQIVKELKRTKVVDTSEQSVPNQIEQLTER
EIDVLREIGLGLNNKEIAEKLFITEGTVKNHVSNLIGKLELRDRTQAAIYAVRYGITTYT

Specific function: Member of the two-component regulatory system yfiJ/yfiK [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=208, Percent_Identity=35.5769230769231, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787473, Length=207, Percent_Identity=38.1642512077295, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788222, Length=218, Percent_Identity=28.4403669724771, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1786747, Length=211, Percent_Identity=28.436018957346, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1790102, Length=209, Percent_Identity=29.1866028708134, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1788712, Length=209, Percent_Identity=28.2296650717703, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI87082052, Length=109, Percent_Identity=35.7798165137615, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1789937, Length=212, Percent_Identity=26.8867924528302, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24538; Mature: 24538

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIMIVDDQPLIRDGLAMLLNLRPELEVVGTASDGDEVVEKIEKLQPEIILMDIRMPRV
CEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCC
NGVEGTRLVRGKFPEVKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHG
CCCCCCEEECCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCC
GGAVLPQDITAQIVKELKRTKVVDTSEQSVPNQIEQLTEREIDVLREIGLGLNNKEIAEK
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LFITEGTVKNHVSNLIGKLELRDRTQAAIYAVRYGITTYT
HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEECC
>Mature Secondary Structure
MIRIMIVDDQPLIRDGLAMLLNLRPELEVVGTASDGDEVVEKIEKLQPEIILMDIRMPRV
CEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCC
NGVEGTRLVRGKFPEVKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHG
CCCCCCEEECCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCC
GGAVLPQDITAQIVKELKRTKVVDTSEQSVPNQIEQLTEREIDVLREIGLGLNNKEIAEK
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LFITEGTVKNHVSNLIGKLELRDRTQAAIYAVRYGITTYT
HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]