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The map label for this gene is rsmC [H]

Identifier: 150398633

GI number: 150398633

Start: 3656090

End: 3657106

Strand: Direct

Name: rsmC [H]

Synonym: Smed_3447

Alternate gene names: 150398633

Gene position: 3656090-3657106 (Clockwise)

Preceding gene: 150398632

Following gene: 150398637

Centisome position: 96.67

GC content: 64.01

Gene sequence:

>1017_bases
ATGAGCCGCGACGCGCTGAAAACACTGTTCCATCCCTTCGCCACCGGGGTCATCGATCCGCCGGGAGAGGGCGAGCGGGT
GCTCTTCCTCGGCGCCGAGGCTGGCTACCGGTTGCCGGAAGGCTTCGCTGCGGAAGTCTCTGCTGTACAGCCTCTCAGAC
CCCTTTACCGGGCGCTTACGGCAGCTCGCGTCGATGTGGTGCCGGTTGCGGACGGGGATGGCTACGACGCTGCGCTCGTT
CTCAGCGGCAAGCACAAGGGCGAGAATGAAGACCGGATCGCGGAGGCGCTGAAGCGCACCCGCGCCGGTGCGCTGATCGT
GGTTGCGGGCGGCAAGGAGGACGGCATTCAGTCGCTGCGAAAGAGGATCGACAAGTTCGGTTGGGACGGCGACGCAATGC
CGAAGTATCACGGCGTCGTCTTCTGGTTCACCCGGCCGGAAAGCGCCGCCGAAGCCATCTCTGCGCTCGCCAAGGTTCCG
GTGCGCGTCGATGGACTGTTCGAGGCTGCCCCCGGCATGTTCTCGCATGATCGCGTCGATGCGGGCTCGGAACTGCTCGC
GTCGCGCCTGCCGCGCGACTTCACCGGTCATGCGGCGGATTTCGGTGCCGGCTGGGGATATCTGTCCGTCAGGCTCGCTG
AGGCTTCGCCAACCCTCAAGGGCATCGATCTGTTCGAGGCGGATTTCGAAGCACTGGAAGCGGCACGCGCGAATATGGCG
GCGAACGCGCCTTCGACACCGGCCCGATTCTATTGGCACGACCTGTCAACGGAAGACACGCGCGACAAATACGACCTTAT
CGTCATGAACCCGCCCTTTCATGAAGGCCATGCCGCCGAGCCGGCGCTCGGTGCGGCTATGATCAAGGCAGCCGCCAAGG
CACTGAAGCATGGCGGCCGACTGATGCTCGTCGCCAATCGCGGGCTTCCCTATGAGCCGGTTCTGGCGGAAAATTTCAAG
GAGATGGGCGAGACCTGCCGTAACGCGCGCTTCAAGGTGCTCTGGGCGAAAAGGTAA

Upstream 100 bases:

>100_bases
AACGACGTATTTTCCGGGAGAAGCCACATATTCTGGAAGTGCTCGAAATGCGGCCCCCTCGCCGCGTTCCGAGAGGTTAA
CCAAGAACGGAATTGAACCT

Downstream 100 bases:

>100_bases
AAGGGCGAACCGCTCCCGCAAACCGGGGCGAAGGGGACTCGCTGCATCACCTGAACCCGCCCCCACCGTCCTATCGAGGG
GAGAGAGGGGCGCAGCCAAA

Product: methyltransferase small

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSRDALKTLFHPFATGVIDPPGEGERVLFLGAEAGYRLPEGFAAEVSAVQPLRPLYRALTAARVDVVPVADGDGYDAALV
LSGKHKGENEDRIAEALKRTRAGALIVVAGGKEDGIQSLRKRIDKFGWDGDAMPKYHGVVFWFTRPESAAEAISALAKVP
VRVDGLFEAAPGMFSHDRVDAGSELLASRLPRDFTGHAADFGAGWGYLSVRLAEASPTLKGIDLFEADFEALEAARANMA
ANAPSTPARFYWHDLSTEDTRDKYDLIVMNPPFHEGHAAEPALGAAMIKAAAKALKHGGRLMLVANRGLPYEPVLAENFK
EMGETCRNARFKVLWAKR

Sequences:

>Translated_338_residues
MSRDALKTLFHPFATGVIDPPGEGERVLFLGAEAGYRLPEGFAAEVSAVQPLRPLYRALTAARVDVVPVADGDGYDAALV
LSGKHKGENEDRIAEALKRTRAGALIVVAGGKEDGIQSLRKRIDKFGWDGDAMPKYHGVVFWFTRPESAAEAISALAKVP
VRVDGLFEAAPGMFSHDRVDAGSELLASRLPRDFTGHAADFGAGWGYLSVRLAEASPTLKGIDLFEADFEALEAARANMA
ANAPSTPARFYWHDLSTEDTRDKYDLIVMNPPFHEGHAAEPALGAAMIKAAAKALKHGGRLMLVANRGLPYEPVLAENFK
EMGETCRNARFKVLWAKR
>Mature_337_residues
SRDALKTLFHPFATGVIDPPGEGERVLFLGAEAGYRLPEGFAAEVSAVQPLRPLYRALTAARVDVVPVADGDGYDAALVL
SGKHKGENEDRIAEALKRTRAGALIVVAGGKEDGIQSLRKRIDKFGWDGDAMPKYHGVVFWFTRPESAAEAISALAKVPV
RVDGLFEAAPGMFSHDRVDAGSELLASRLPRDFTGHAADFGAGWGYLSVRLAEASPTLKGIDLFEADFEALEAARANMAA
NAPSTPARFYWHDLSTEDTRDKYDLIVMNPPFHEGHAAEPALGAAMIKAAAKALKHGGRLMLVANRGLPYEPVLAENFKE
MGETCRNARFKVLWAKR

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=277, Percent_Identity=30.6859205776173, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082206, Length=169, Percent_Identity=28.4023668639053, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 36598; Mature: 36467

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDALKTLFHPFATGVIDPPGEGERVLFLGAEAGYRLPEGFAAEVSAVQPLRPLYRALT
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AARVDVVPVADGDGYDAALVLSGKHKGENEDRIAEALKRTRAGALIVVAGGKEDGIQSLR
HHHEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
KRIDKFGWDGDAMPKYHGVVFWFTRPESAAEAISALAKVPVRVDGLFEAAPGMFSHDRVD
HHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEECCHHHHCCCCCCCCCCC
AGSELLASRLPRDFTGHAADFGAGWGYLSVRLAEASPTLKGIDLFEADFEALEAARANMA
CHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
ANAPSTPARFYWHDLSTEDTRDKYDLIVMNPPFHEGHAAEPALGAAMIKAAAKALKHGGR
CCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
LMLVANRGLPYEPVLAENFKEMGETCRNARFKVLWAKR
EEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECC
>Mature Secondary Structure 
SRDALKTLFHPFATGVIDPPGEGERVLFLGAEAGYRLPEGFAAEVSAVQPLRPLYRALT
CHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AARVDVVPVADGDGYDAALVLSGKHKGENEDRIAEALKRTRAGALIVVAGGKEDGIQSLR
HHHEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
KRIDKFGWDGDAMPKYHGVVFWFTRPESAAEAISALAKVPVRVDGLFEAAPGMFSHDRVD
HHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEECCHHHHCCCCCCCCCCC
AGSELLASRLPRDFTGHAADFGAGWGYLSVRLAEASPTLKGIDLFEADFEALEAARANMA
CHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
ANAPSTPARFYWHDLSTEDTRDKYDLIVMNPPFHEGHAAEPALGAAMIKAAAKALKHGGR
CCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
LMLVANRGLPYEPVLAENFKEMGETCRNARFKVLWAKR
EEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA