Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
---|---|
Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is pheA [H]
Identifier: 150398614
GI number: 150398614
Start: 3633467
End: 3634321
Strand: Direct
Name: pheA [H]
Synonym: Smed_3428
Alternate gene names: 150398614
Gene position: 3633467-3634321 (Clockwise)
Preceding gene: 150398613
Following gene: 150398615
Centisome position: 96.08
GC content: 61.52
Gene sequence:
>855_bases GTGACAGCCAAGACCAACCGGATTTCCTTTCAGGGCGACTACGGCGCCAATTCCGACATGGCCTGCCGCGACATGTTCCC GGCGATGGAGCCGCTGCCCTGCCAAACCTTCGAAGATGCCTTCCTGGCGGTGGAAAACGGCGAGGCCGATCTCGCGATGA TCCCGATCGAGAACACGATCGCCGGTCGAGTCGCCGACATTCACCACCTCCTGCCGGAATCGCGCCTTAACATCGTCGGC GAATATTTCATGCCGATTCGCTTCCAGCTGATGGTGCTGCCCGGCGTCAAACGCGACGAGATACGTACGGTTCACAGCCA TATCCACGCGCTCGGACAATGCCGCAAGATCGTGCGTGCCAATGGCTGGAAGCCGGTGGTCGCGGGCGATACGGCCGGCG CCGCCAAGCTCGTCAGGGAAGTCGGAGACCGCTCCATGGCGGCGCTTGCTCCGCGCCTTGCCGCCGATCTCTACGGACTC GAAATCATCGCCGAGAACGTGGAAGACACCGACAGCAACGTCACGCGCTTCGTCGTGCTGTCGCGGGAAGAGAAACGGGC GGCGCGCACGTCAAAGGACGAGCTGATCATCACGACCTTTGTCTTCAACGTGCGCAATATCCCGGCGGCGCTCTACAAGG CCATGGGCGGTTTCGCGACGAACGGCATCAACATGACCAAGCTCGAGAGCTATCAGCTCGGCGGCAGGTTCGTGGCGACC CAGTTCTATGCGGATATCGAAGGTCACCCCGACGATATCGGCGTGCGCCACGCGATGGACGAGTTGCGCTTCTTCTCCGA AAACGTACGCATTCTCGGCACTTATCCGGCGCATCCGATGCGCGGTGTGCTCTGA
Upstream 100 bases:
>100_bases GATTCGGTGCCGCTCGGCGTCGACACGCCTGCAGATCTCGACAAGGCCCGCCGGATCCTTTCGGCCCGGGCCTGAGATTT TCACATCAAGGGGAACTGAC
Downstream 100 bases:
>100_bases AGATCGGCGCCGATGACGAAGGCGGTCTTGGGTCAGTGGCGCGCGAGATCATTTGAACCGCGCCGGAGCCACTGCGATTG ATCGTGGCTCCCCAACTCCG
Product: prephenate dehydratase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTAKTNRISFQGDYGANSDMACRDMFPAMEPLPCQTFEDAFLAVENGEADLAMIPIENTIAGRVADIHHLLPESRLNIVG EYFMPIRFQLMVLPGVKRDEIRTVHSHIHALGQCRKIVRANGWKPVVAGDTAGAAKLVREVGDRSMAALAPRLAADLYGL EIIAENVEDTDSNVTRFVVLSREEKRAARTSKDELIITTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGRFVAT QFYADIEGHPDDIGVRHAMDELRFFSENVRILGTYPAHPMRGVL
Sequences:
>Translated_284_residues MTAKTNRISFQGDYGANSDMACRDMFPAMEPLPCQTFEDAFLAVENGEADLAMIPIENTIAGRVADIHHLLPESRLNIVG EYFMPIRFQLMVLPGVKRDEIRTVHSHIHALGQCRKIVRANGWKPVVAGDTAGAAKLVREVGDRSMAALAPRLAADLYGL EIIAENVEDTDSNVTRFVVLSREEKRAARTSKDELIITTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGRFVAT QFYADIEGHPDDIGVRHAMDELRFFSENVRILGTYPAHPMRGVL >Mature_283_residues TAKTNRISFQGDYGANSDMACRDMFPAMEPLPCQTFEDAFLAVENGEADLAMIPIENTIAGRVADIHHLLPESRLNIVGE YFMPIRFQLMVLPGVKRDEIRTVHSHIHALGQCRKIVRANGWKPVVAGDTAGAAKLVREVGDRSMAALAPRLAADLYGLE IIAENVEDTDSNVTRFVVLSREEKRAARTSKDELIITTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGRFVATQ FYADIEGHPDDIGVRHAMDELRFFSENVRILGTYPAHPMRGVL
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=276, Percent_Identity=32.2463768115942, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010952 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 31484; Mature: 31352
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00857 PREPHENATE_DEHYDR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKTNRISFQGDYGANSDMACRDMFPAMEPLPCQTFEDAFLAVENGEADLAMIPIENTI CCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCHH AGRVADIHHLLPESRLNIVGEYFMPIRFQLMVLPGVKRDEIRTVHSHIHALGQCRKIVRA HHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC NGWKPVVAGDTAGAAKLVREVGDRSMAALAPRLAADLYGLEIIAENVEDTDSNVTRFVVL CCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE SREEKRAARTSKDELIITTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGRFVAT ECHHHHHHCCCCCCEEEEEEEHHHHCCHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEE QFYADIEGHPDDIGVRHAMDELRFFSENVRILGTYPAHPMRGVL EEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC >Mature Secondary Structure TAKTNRISFQGDYGANSDMACRDMFPAMEPLPCQTFEDAFLAVENGEADLAMIPIENTI CCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCHH AGRVADIHHLLPESRLNIVGEYFMPIRFQLMVLPGVKRDEIRTVHSHIHALGQCRKIVRA HHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC NGWKPVVAGDTAGAAKLVREVGDRSMAALAPRLAADLYGLEIIAENVEDTDSNVTRFVVL CCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE SREEKRAARTSKDELIITTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGRFVAT ECHHHHHHCCCCCCEEEEEEEHHHHCCHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEE QFYADIEGHPDDIGVRHAMDELRFFSENVRILGTYPAHPMRGVL EEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]