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The map label for this gene is 150398545

Identifier: 150398545

GI number: 150398545

Start: 3555560

End: 3556570

Strand: Direct

Name: 150398545

Synonym: Smed_3356

Alternate gene names: NA

Gene position: 3555560-3556570 (Clockwise)

Preceding gene: 150398544

Following gene: 150398546

Centisome position: 94.02

GC content: 60.93

Gene sequence:

>1011_bases
ATGTTCGGCATAGACATCACCGTCCTGGGATTGGCCGGCCTCGTCGCCTTGGCGGCGGCGGCGCTCGCCTATGGTTTGCT
CTATCCCCGGATCGAGACCGAAAAGAAAACCGAAGGCCGCCTGCTCCGGGTCAGCGCCGCCGAGACGGACCGAACCAAGA
TCAAGGCCGCGCGGGACCGCGTCAACGAGATGTCGAAGCGCCGCAAGTCCGTTCAGGATTCGCTGAAGGAACTCGAGAAG
AAGCAACAGGAAAAATCTGCCAATTCGGCACCTTCGATGAAGAAACGCCTGCTGCAGGCCAACCTTTCGATATCGGTCGC
GCAGTTCTATCTGTTCAGCGCGCTTTTCGGATTGTTCACCTTTGTCGTCGTCTTCCTGGCGGGCGCGGGGGCGCTCATTG
CCGCGGGTGTTGGGCTGACCGCCGCCGCCGGGCTGCCGCGCTGGATCGTCGGCTCCAGGATCAAACGCCGCTGCAGGAAG
TTCCTGGACGAGTTTCCGAACGCGCTCGATGTGATGGTCCGATCGATCAAGTCGGGGCTACCTCTGAACGACGCGCTGCG
ACTGATCGCAAGCGACGGACAGGAGCCGGTCAGGACGGAATTCCGGCGCGTTGTCGAGTCCCAGCAGGTGGGCCTCAACG
TTCCCGAAGCCTGCGCCCGCATGATCCACAGCATCCCGCTGCCGGAAGTGAATTTCTTCGCGATCGTCATCGCCATTCAG
GCGCAGGCGGGCGGCAATCTCTCCGAGGCGCTCGGCAACCTTTCCAAGGTGCTGCGCGAGCGCAGGAAGATGAAGGCGAA
GGTCAATGCGCTGTCCATGGAAGCCAAGGCATCCGCCTGCATTATCGGAGCACTGCCCTTCATCGTGGCAACGCTCGTCT
ATCTGACGTCGCCCGCCTACATGGCCATTCTTTTCACCGATCCGCGCGGTCACCTCATAATGGGCGCCTCCGCCGTGTGG
ATGAGCATCGGTATCTGGATGATGCGCAACATGATCAATTTCGATATTTGA

Upstream 100 bases:

>100_bases
CGGCTCGCCGCGACACTCGATGCGATGGAAAAGCAATAGAGCGGGATGAGGCCGCTGCTCTAGCGCAGCATACTTCTGAC
GCGAGGGGACAGACCGAGCG

Downstream 100 bases:

>100_bases
GGGCCAGACTGACGTGGACGGCTGGATAGAGACGCTTACCGATCCGAATATCATCGTCGCGGTGCTGGTTTCGATGGCCG
TGCTCGCTACCTTCTATTCG

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadB Protein; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Type II Secretion System Protein F; Secretion System Protein; Type II Secretion System; Type II Secretion System Protein F Domain; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Transmembrane Pilus Component Protein; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; Integral Membrane Protein; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MFGIDITVLGLAGLVALAAAALAYGLLYPRIETEKKTEGRLLRVSAAETDRTKIKAARDRVNEMSKRRKSVQDSLKELEK
KQQEKSANSAPSMKKRLLQANLSISVAQFYLFSALFGLFTFVVVFLAGAGALIAAGVGLTAAAGLPRWIVGSRIKRRCRK
FLDEFPNALDVMVRSIKSGLPLNDALRLIASDGQEPVRTEFRRVVESQQVGLNVPEACARMIHSIPLPEVNFFAIVIAIQ
AQAGGNLSEALGNLSKVLRERRKMKAKVNALSMEAKASACIIGALPFIVATLVYLTSPAYMAILFTDPRGHLIMGASAVW
MSIGIWMMRNMINFDI

Sequences:

>Translated_336_residues
MFGIDITVLGLAGLVALAAAALAYGLLYPRIETEKKTEGRLLRVSAAETDRTKIKAARDRVNEMSKRRKSVQDSLKELEK
KQQEKSANSAPSMKKRLLQANLSISVAQFYLFSALFGLFTFVVVFLAGAGALIAAGVGLTAAAGLPRWIVGSRIKRRCRK
FLDEFPNALDVMVRSIKSGLPLNDALRLIASDGQEPVRTEFRRVVESQQVGLNVPEACARMIHSIPLPEVNFFAIVIAIQ
AQAGGNLSEALGNLSKVLRERRKMKAKVNALSMEAKASACIIGALPFIVATLVYLTSPAYMAILFTDPRGHLIMGASAVW
MSIGIWMMRNMINFDI
>Mature_336_residues
MFGIDITVLGLAGLVALAAAALAYGLLYPRIETEKKTEGRLLRVSAAETDRTKIKAARDRVNEMSKRRKSVQDSLKELEK
KQQEKSANSAPSMKKRLLQANLSISVAQFYLFSALFGLFTFVVVFLAGAGALIAAGVGLTAAAGLPRWIVGSRIKRRCRK
FLDEFPNALDVMVRSIKSGLPLNDALRLIASDGQEPVRTEFRRVVESQQVGLNVPEACARMIHSIPLPEVNFFAIVIAIQ
AQAGGNLSEALGNLSKVLRERRKMKAKVNALSMEAKASACIIGALPFIVATLVYLTSPAYMAILFTDPRGHLIMGASAVW
MSIGIWMMRNMINFDI

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36696; Mature: 36696

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGIDITVLGLAGLVALAAAALAYGLLYPRIETEKKTEGRLLRVSAAETDRTKIKAARDR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
VNEMSKRRKSVQDSLKELEKKQQEKSANSAPSMKKRLLQANLSISVAQFYLFSALFGLFT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FVVVFLAGAGALIAAGVGLTAAAGLPRWIVGSRIKRRCRKFLDEFPNALDVMVRSIKSGL
HHHHHHHCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
PLNDALRLIASDGQEPVRTEFRRVVESQQVGLNVPEACARMIHSIPLPEVNFFAIVIAIQ
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEE
AQAGGNLSEALGNLSKVLRERRKMKAKVNALSMEAKASACIIGALPFIVATLVYLTSPAY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
MAILFTDPRGHLIMGASAVWMSIGIWMMRNMINFDI
EEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGIDITVLGLAGLVALAAAALAYGLLYPRIETEKKTEGRLLRVSAAETDRTKIKAARDR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
VNEMSKRRKSVQDSLKELEKKQQEKSANSAPSMKKRLLQANLSISVAQFYLFSALFGLFT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FVVVFLAGAGALIAAGVGLTAAAGLPRWIVGSRIKRRCRKFLDEFPNALDVMVRSIKSGL
HHHHHHHCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
PLNDALRLIASDGQEPVRTEFRRVVESQQVGLNVPEACARMIHSIPLPEVNFFAIVIAIQ
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEE
AQAGGNLSEALGNLSKVLRERRKMKAKVNALSMEAKASACIIGALPFIVATLVYLTSPAY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
MAILFTDPRGHLIMGASAVWMSIGIWMMRNMINFDI
EEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA