Click here to switch to the map view.

The map label for this gene is 150398522

Identifier: 150398522

GI number: 150398522

Start: 3530877

End: 3532298

Strand: Direct

Name: 150398522

Synonym: Smed_3333

Alternate gene names: NA

Gene position: 3530877-3532298 (Clockwise)

Preceding gene: 150398521

Following gene: 150398523

Centisome position: 93.36

GC content: 63.36

Gene sequence:

>1422_bases
ATGACGGAAGCCCCGCGCGTCCGGCTTGTCGGCGCTGAGATTTTCGAGCGGCCGGTCGAGTTCCGTTTCCCTTTCCGCTT
CGGGGCGGCGCGCGTTACGAACGCGCCGCAGGCCTTCGTTCGGGTGCGGGTGGAGGATGCGAGCGGCCGATCCACCATCG
GTAGGTCCGCCGAGATGATGATGCCGAAATGGTTCGACAAGAATCCGAGCCTTTCGCCGGAAGATAATGTCGGGCAGCTT
CGCGCGTCTTTGCGTCTGGCCGCCGAAGGGTTGAAATCCTTGCAGGCGGAGACCGCTTTCGGCCTGCATGTTGCCGCAGA
GACCGAACACCACCAGGCGGCGGCAACGCATGGCCTGCCGCCTCTCGTCGCATCCTACGGCCTGGCGCTCCTTGACCGCG
CCATCCTTGATGCGGTGTGCCGCATGATGGGAGCATGCGCCGCCGAAGCGGTCAGAAACAACCTGCTCGGCGTCAGCGGC
GTCGCCGCGCCGGATCTCGCCGGTTTCGACCTCACGCGCTTCCTCTCGCGTCTAAACGTTTCGTCGCGGCTCGCCGTGCG
GCACACGATCGGACTTGCGGACGTTCTGACTGTGGCCGATCTCGGCGCGATGCAGCGGCCGGCGGACGGTCTTCCTCAAA
CGCTCGAAGATGTGATCGCCGCCTATGGTCACAGGTATTTCAAGATCAAGGTTTCCGGCAGGCCGGCAGAAGATATCGAG
CGCCTCGTCGCCATCGCGGCCATACTCGATGACCGTGTCGGCGATTACAGGGCGACACTCGACGGCAATGAACAGTTCGA
GAATATCGACCTGGTCTGCGATCTTCTCGATCGGATCGAAGAAGAGCCGCGTCTCAAGCGACTCCGGGCGTCGATGCTCT
TTTTTGAACAGCCGATCGCGCGTGCAGAGGCGCTGTCGAAGCCGGTCGTCGCCGCCGCGCAACGGATGCCCCTGGAAATC
GACGAGTCCGACGGCGACATGGGTGCGTTTCTCCGGGCTCGTGAGCTTGGTTATGCCGGCATCTCCTCGAAGTCATGCAA
GGGCTTCTATCGGGCACTCATCAATCGCGCCCGGGTGGAAAAGTGGAACGCCGAGGCGGGCTCATCCCATTATTTCATGT
CCGCCGAGGACCTGACGACGCAAGCGGGTTTGGCCCTGCAGCAGGATCTGGTGCTGGCATCACTTGTCGGCGCCGGTCAC
GTCGAGCGCAACGGTCACCATTATGTCGACGGAATGGCGGGGGCACCCGAGGGCGAGCAATTGGCCTATCTGTCGCATCA
CGGCGATCTATACGAAGGCGCCGCCGGGCAGACGCGGCTCGCCATACAGGCGGGTGAAATCACCTTTGCAACAGCCTTGC
GATCCGTCGGCCTCGGCTCATCCGTCGACCCGGACTGGGCCGCGATGAGGCCCGTTTCGTGA

Upstream 100 bases:

>100_bases
CCGTCTGGCGGACAGAGCCGGCGTTCTCCAGGATCCGGAGCTGGCCGCCGGGCGCATGCGGCGCGTCCTCGCCGTCAACG
GCGTCGCGTGAGGCCCCGGC

Downstream 100 bases:

>100_bases
AGAATGCGAGGAGAGTACCATGCAGGTCGAAGGCCTTTCCATCAATCTGGCGACCATCCGGGAGCAATGCGGCTTCGCCG
AAGCCGTGGATGTCTGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MTEAPRVRLVGAEIFERPVEFRFPFRFGAARVTNAPQAFVRVRVEDASGRSTIGRSAEMMMPKWFDKNPSLSPEDNVGQL
RASLRLAAEGLKSLQAETAFGLHVAAETEHHQAAATHGLPPLVASYGLALLDRAILDAVCRMMGACAAEAVRNNLLGVSG
VAAPDLAGFDLTRFLSRLNVSSRLAVRHTIGLADVLTVADLGAMQRPADGLPQTLEDVIAAYGHRYFKIKVSGRPAEDIE
RLVAIAAILDDRVGDYRATLDGNEQFENIDLVCDLLDRIEEEPRLKRLRASMLFFEQPIARAEALSKPVVAAAQRMPLEI
DESDGDMGAFLRARELGYAGISSKSCKGFYRALINRARVEKWNAEAGSSHYFMSAEDLTTQAGLALQQDLVLASLVGAGH
VERNGHHYVDGMAGAPEGEQLAYLSHHGDLYEGAAGQTRLAIQAGEITFATALRSVGLGSSVDPDWAAMRPVS

Sequences:

>Translated_473_residues
MTEAPRVRLVGAEIFERPVEFRFPFRFGAARVTNAPQAFVRVRVEDASGRSTIGRSAEMMMPKWFDKNPSLSPEDNVGQL
RASLRLAAEGLKSLQAETAFGLHVAAETEHHQAAATHGLPPLVASYGLALLDRAILDAVCRMMGACAAEAVRNNLLGVSG
VAAPDLAGFDLTRFLSRLNVSSRLAVRHTIGLADVLTVADLGAMQRPADGLPQTLEDVIAAYGHRYFKIKVSGRPAEDIE
RLVAIAAILDDRVGDYRATLDGNEQFENIDLVCDLLDRIEEEPRLKRLRASMLFFEQPIARAEALSKPVVAAAQRMPLEI
DESDGDMGAFLRARELGYAGISSKSCKGFYRALINRARVEKWNAEAGSSHYFMSAEDLTTQAGLALQQDLVLASLVGAGH
VERNGHHYVDGMAGAPEGEQLAYLSHHGDLYEGAAGQTRLAIQAGEITFATALRSVGLGSSVDPDWAAMRPVS
>Mature_472_residues
TEAPRVRLVGAEIFERPVEFRFPFRFGAARVTNAPQAFVRVRVEDASGRSTIGRSAEMMMPKWFDKNPSLSPEDNVGQLR
ASLRLAAEGLKSLQAETAFGLHVAAETEHHQAAATHGLPPLVASYGLALLDRAILDAVCRMMGACAAEAVRNNLLGVSGV
AAPDLAGFDLTRFLSRLNVSSRLAVRHTIGLADVLTVADLGAMQRPADGLPQTLEDVIAAYGHRYFKIKVSGRPAEDIER
LVAIAAILDDRVGDYRATLDGNEQFENIDLVCDLLDRIEEEPRLKRLRASMLFFEQPIARAEALSKPVVAAAQRMPLEID
ESDGDMGAFLRARELGYAGISSKSCKGFYRALINRARVEKWNAEAGSSHYFMSAEDLTTQAGLALQQDLVLASLVGAGHV
ERNGHHYVDGMAGAPEGEQLAYLSHHGDLYEGAAGQTRLAIQAGEITFATALRSVGLGSSVDPDWAAMRPVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51161; Mature: 51030

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAPRVRLVGAEIFERPVEFRFPFRFGAARVTNAPQAFVRVRVEDASGRSTIGRSAEMM
CCCCCCEEEECHHHHCCCCCEECCCCCCCHHHCCCCCEEEEEEEECCCCCCHHCCCHHHC
MPKWFDKNPSLSPEDNVGQLRASLRLAAEGLKSLQAETAFGLHVAAETEHHQAAATHGLP
CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHCCCC
PLVASYGLALLDRAILDAVCRMMGACAAEAVRNNLLGVSGVAAPDLAGFDLTRFLSRLNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
SSRLAVRHTIGLADVLTVADLGAMQRPADGLPQTLEDVIAAYGHRYFKIKVSGRPAEDIE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHH
RLVAIAAILDDRVGDYRATLDGNEQFENIDLVCDLLDRIEEEPRLKRLRASMLFFEQPIA
HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RAEALSKPVVAAAQRMPLEIDESDGDMGAFLRARELGYAGISSKSCKGFYRALINRARVE
HHHHHCCHHHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
KWNAEAGSSHYFMSAEDLTTQAGLALQQDLVLASLVGAGHVERNGHHYVDGMAGAPEGEQ
HCCCCCCCCEEEECHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCE
LAYLSHHGDLYEGAAGQTRLAIQAGEITFATALRSVGLGSSVDPDWAAMRPVS
EEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEAPRVRLVGAEIFERPVEFRFPFRFGAARVTNAPQAFVRVRVEDASGRSTIGRSAEMM
CCCCCEEEECHHHHCCCCCEECCCCCCCHHHCCCCCEEEEEEEECCCCCCHHCCCHHHC
MPKWFDKNPSLSPEDNVGQLRASLRLAAEGLKSLQAETAFGLHVAAETEHHQAAATHGLP
CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHCCCC
PLVASYGLALLDRAILDAVCRMMGACAAEAVRNNLLGVSGVAAPDLAGFDLTRFLSRLNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
SSRLAVRHTIGLADVLTVADLGAMQRPADGLPQTLEDVIAAYGHRYFKIKVSGRPAEDIE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHH
RLVAIAAILDDRVGDYRATLDGNEQFENIDLVCDLLDRIEEEPRLKRLRASMLFFEQPIA
HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RAEALSKPVVAAAQRMPLEIDESDGDMGAFLRARELGYAGISSKSCKGFYRALINRARVE
HHHHHCCHHHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
KWNAEAGSSHYFMSAEDLTTQAGLALQQDLVLASLVGAGHVERNGHHYVDGMAGAPEGEQ
HCCCCCCCCEEEECHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCE
LAYLSHHGDLYEGAAGQTRLAIQAGEITFATALRSVGLGSSVDPDWAAMRPVS
EEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA