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The map label for this gene is yeaX [H]

Identifier: 150398503

GI number: 150398503

Start: 3506466

End: 3507431

Strand: Direct

Name: yeaX [H]

Synonym: Smed_3313

Alternate gene names: 150398503

Gene position: 3506466-3507431 (Clockwise)

Preceding gene: 150398502

Following gene: 150398504

Centisome position: 92.72

GC content: 61.8

Gene sequence:

>966_bases
GTGAGCGGTGGTACCGAAATTCCCGTCCGCGTGACCAAGGTGACGCCCGTTGCGCATCGCATCAAGCGCTTCCGCTTCGA
GCGCCTGGATGGCCGGCCGATGCCGTACTTCTCCGGTGGCGCTCACGTCATCGTTTCGATGAACGACAATGGCCACCTCC
GGCGCAACGCCTACTCGCTGATGTCGCCGCCATATGATTGCTCGGCCTACGAGATCAGCGTTCTGCATGTCGATGATTCG
CGTGGCGGCTCGTCCTTCATGCACGAGAAGGTGCGCGAAGGCGACGAGATGAGGGTCTCCCATCCGGTCAATCTGTTCCA
GCCGGATTGGCGCGGCCGCAAACATCTGCTGATTGCCGGCGGCATCGGGATCACGCCCTTCATCGCCATGATGGAGCAGT
TTTCCCGCGAGGGTGCCCAGTTCGAATTGCATTATGCCATTCGGTCGCGCGACCGCGGCGCATATTGCGAGGACCTCGTC
GCCCACTACGGACGGCATCGGGTGAAGATCTATTGCGATGCCGAAGACAATCGCATTCCGGTCGCCCGCTTGCTCGACAG
CCAACCGCTCGGCACGCATCTCTATGTCTGCGGTCCCGCGGGCCTGATCGACGGCGTACTCAAGTCCGGGCTGGAGTCTG
GCTGGCCGGAGCAGAACCTGCATTCCGAGCGCTTTCTGTCCTCCCAGCCCGGCAAGCCCTTTTCGATCGAGCTGACGCGC
TCCGGCAAGACCGTCCATGTCGGTCATCATGAGAGCATGCTGGAGGCGATTGAGTCGGCCGGCGTCGATGCGCCCTTTCT
CTGTCGCGGCGGTGCCTGCGGGCAATGCGAAACAAGGGTCGCACTCTGCGACGGCAAGCTGCTGCACAACGACGTCTATC
TGACCGACGAAGAAAAGGCTTCCGGCCGAAAGGTGATGCTCTGCGTCTCTCGATTCGAGGGAAAGGCCTTGCATCTCGAC
CTCTAG

Upstream 100 bases:

>100_bases
TCGTACGCGACCATTACTCGCGGCGCCTCGGCGCCTTTCAGGGCGTCAATATCGATGCGGAAGAACCCGGCAGCGCACCT
GACCCGGAGGAGTTGTTCCT

Downstream 100 bases:

>100_bases
AGCCGTTCCGGGAAAACCGTCCAACAGTTTTCCGCCCAGAAATGTGTAGCTTCAAAGACTTGGATTGTTCGACGAAACAA
TCCATCGGGCCGACGAGGAG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSGGTEIPVRVTKVTPVAHRIKRFRFERLDGRPMPYFSGGAHVIVSMNDNGHLRRNAYSLMSPPYDCSAYEISVLHVDDS
RGGSSFMHEKVREGDEMRVSHPVNLFQPDWRGRKHLLIAGGIGITPFIAMMEQFSREGAQFELHYAIRSRDRGAYCEDLV
AHYGRHRVKIYCDAEDNRIPVARLLDSQPLGTHLYVCGPAGLIDGVLKSGLESGWPEQNLHSERFLSSQPGKPFSIELTR
SGKTVHVGHHESMLEAIESAGVDAPFLCRGGACGQCETRVALCDGKLLHNDVYLTDEEKASGRKVMLCVSRFEGKALHLD
L

Sequences:

>Translated_321_residues
MSGGTEIPVRVTKVTPVAHRIKRFRFERLDGRPMPYFSGGAHVIVSMNDNGHLRRNAYSLMSPPYDCSAYEISVLHVDDS
RGGSSFMHEKVREGDEMRVSHPVNLFQPDWRGRKHLLIAGGIGITPFIAMMEQFSREGAQFELHYAIRSRDRGAYCEDLV
AHYGRHRVKIYCDAEDNRIPVARLLDSQPLGTHLYVCGPAGLIDGVLKSGLESGWPEQNLHSERFLSSQPGKPFSIELTR
SGKTVHVGHHESMLEAIESAGVDAPFLCRGGACGQCETRVALCDGKLLHNDVYLTDEEKASGRKVMLCVSRFEGKALHLD
L
>Mature_320_residues
SGGTEIPVRVTKVTPVAHRIKRFRFERLDGRPMPYFSGGAHVIVSMNDNGHLRRNAYSLMSPPYDCSAYEISVLHVDDSR
GGSSFMHEKVREGDEMRVSHPVNLFQPDWRGRKHLLIAGGIGITPFIAMMEQFSREGAQFELHYAIRSRDRGAYCEDLVA
HYGRHRVKIYCDAEDNRIPVARLLDSQPLGTHLYVCGPAGLIDGVLKSGLESGWPEQNLHSERFLSSQPGKPFSIELTRS
GKTVHVGHHESMLEAIESAGVDAPFLCRGGACGQCETRVALCDGKLLHNDVYLTDEEKASGRKVMLCVSRFEGKALHLDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=323, Percent_Identity=40.5572755417957, Blast_Score=248, Evalue=3e-67,
Organism=Escherichia coli, GI1787658, Length=315, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35757; Mature: 35626

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGTEIPVRVTKVTPVAHRIKRFRFERLDGRPMPYFSGGAHVIVSMNDNGHLRRNAYSL
CCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCCEEECHHHH
MSPPYDCSAYEISVLHVDDSRGGSSFMHEKVREGDEMRVSHPVNLFQPDWRGRKHLLIAG
CCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEC
GIGITPFIAMMEQFSREGAQFELHYAIRSRDRGAYCEDLVAHYGRHRVKIYCDAEDNRIP
CCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCC
VARLLDSQPLGTHLYVCGPAGLIDGVLKSGLESGWPEQNLHSERFLSSQPGKPFSIELTR
HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEC
SGKTVHVGHHESMLEAIESAGVDAPFLCRGGACGQCETRVALCDGKLLHNDVYLTDEEKA
CCCEEEECCHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEECCEEEECEEEEECCCCC
SGRKVMLCVSRFEGKALHLDL
CCCEEEEEEECCCCCEEEEEC
>Mature Secondary Structure 
SGGTEIPVRVTKVTPVAHRIKRFRFERLDGRPMPYFSGGAHVIVSMNDNGHLRRNAYSL
CCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCCEEECHHHH
MSPPYDCSAYEISVLHVDDSRGGSSFMHEKVREGDEMRVSHPVNLFQPDWRGRKHLLIAG
CCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEC
GIGITPFIAMMEQFSREGAQFELHYAIRSRDRGAYCEDLVAHYGRHRVKIYCDAEDNRIP
CCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCC
VARLLDSQPLGTHLYVCGPAGLIDGVLKSGLESGWPEQNLHSERFLSSQPGKPFSIELTR
HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEC
SGKTVHVGHHESMLEAIESAGVDAPFLCRGGACGQCETRVALCDGKLLHNDVYLTDEEKA
CCCEEEECCHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEECCEEEECEEEEECCCCC
SGRKVMLCVSRFEGKALHLDL
CCCEEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]