Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150398504
Identifier: 150398504
GI number: 150398504
Start: 3507542
End: 3508582
Strand: Direct
Name: 150398504
Synonym: Smed_3314
Alternate gene names: NA
Gene position: 3507542-3508582 (Clockwise)
Preceding gene: 150398503
Following gene: 150398505
Centisome position: 92.75
GC content: 59.17
Gene sequence:
>1041_bases ATGGCAATCGCCTTCAAGCAGGAAACATTCCGGGATGATTTCAGCTATCGCAACAGTGCGGAAAACATTCGGCGCTTCCC GTTTCCGTTCGACCGCGACGAGTACATGTACGCAGTCAACATGGAACCGCATGTGAAGGGGCAGAAGGGCACCGCCTTCG AAAACCTGATCGACATCGATGAGCATTACGTCGCCGAGATGCGAGACCGGGCTCTGGTTCTCAAAGAGGACCCGCTGCGC TATCAGGCCCTGCCTCATATGATGGCCGCGCAATGGGATACGCTCGAACTTCTGATGGAGGAGCAGGCCGTCGGATTTCC CGAGCATTTCACGCTCGCCAGGAACGGCGATCAATGGCGCTGGATCAACCGGCCGCTCGGCATCGACGACACCTTCACCT TCGGCGATCGCTCGACGCTTCCCTGTGAGCCGCTCGAATACATCACCCGCCAAGCCCAGGGGGACTTCTGCATCGTCGAT CAGCGCGACGGCAATCTCTGGATGGATGCCGGCATGGTCACGACCCAGGCGGACTGGTCGCTCGATTTCGATATCGGCAT GAATTTCATGGAATGGCACGGACCGGTGCCGCTCGCCCATCAGATGGGGGTCTTCGACCGCGCGCTGAAATTTCTCCTGA ACCTGCAGCAGGGCAAGCCTACGCGCCGCTTCAACTGGACGATGACGATCAATCCGCGCCTCGATACCAGTCCGGAAAAC TATCATAAATGGGGTCCGGACCGTGCCACCGTCACGACGGGAAATGTCGGCGACAAGGTGCATCTGCGCGTCGAGGTGCA GAGCCTCTGGCGCCTTCCGCGCTCGAACGCCATCCTCTTCGTCATCCGCTGTTATCTGATGAATATGAATGAGCTCGTGA CGGTACCGAAATGGGCGCGCCGCTTTCCGCGCGTGCTCAGAACGCTGCCGCCGGAGCTTATCGATTACAAGGGCCTTACG CGCTATCGCCAGACCACGATCGACTGGCTTTCGAAATTCGACGACGGCGAGCCGACCAGTCCCGGCACCTTTCCGGATTG A
Upstream 100 bases:
>100_bases GGAAAACCGTCCAACAGTTTTCCGCCCAGAAATGTGTAGCTTCAAAGACTTGGATTGTTCGACGAAACAATCCATCGGGC CGACGAGGAGGAGAACGGGC
Downstream 100 bases:
>100_bases CGCCCTATCCAGCGCCAAGACGACCAAAATCAAAAGGGGAATGCTTCATGACAAGAGTTGCCGTCATCGGTGCCGGTCCA TCGGGCCTTGCTCAATTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MAIAFKQETFRDDFSYRNSAENIRRFPFPFDRDEYMYAVNMEPHVKGQKGTAFENLIDIDEHYVAEMRDRALVLKEDPLR YQALPHMMAAQWDTLELLMEEQAVGFPEHFTLARNGDQWRWINRPLGIDDTFTFGDRSTLPCEPLEYITRQAQGDFCIVD QRDGNLWMDAGMVTTQADWSLDFDIGMNFMEWHGPVPLAHQMGVFDRALKFLLNLQQGKPTRRFNWTMTINPRLDTSPEN YHKWGPDRATVTTGNVGDKVHLRVEVQSLWRLPRSNAILFVIRCYLMNMNELVTVPKWARRFPRVLRTLPPELIDYKGLT RYRQTTIDWLSKFDDGEPTSPGTFPD
Sequences:
>Translated_346_residues MAIAFKQETFRDDFSYRNSAENIRRFPFPFDRDEYMYAVNMEPHVKGQKGTAFENLIDIDEHYVAEMRDRALVLKEDPLR YQALPHMMAAQWDTLELLMEEQAVGFPEHFTLARNGDQWRWINRPLGIDDTFTFGDRSTLPCEPLEYITRQAQGDFCIVD QRDGNLWMDAGMVTTQADWSLDFDIGMNFMEWHGPVPLAHQMGVFDRALKFLLNLQQGKPTRRFNWTMTINPRLDTSPEN YHKWGPDRATVTTGNVGDKVHLRVEVQSLWRLPRSNAILFVIRCYLMNMNELVTVPKWARRFPRVLRTLPPELIDYKGLT RYRQTTIDWLSKFDDGEPTSPGTFPD >Mature_345_residues AIAFKQETFRDDFSYRNSAENIRRFPFPFDRDEYMYAVNMEPHVKGQKGTAFENLIDIDEHYVAEMRDRALVLKEDPLRY QALPHMMAAQWDTLELLMEEQAVGFPEHFTLARNGDQWRWINRPLGIDDTFTFGDRSTLPCEPLEYITRQAQGDFCIVDQ RDGNLWMDAGMVTTQADWSLDFDIGMNFMEWHGPVPLAHQMGVFDRALKFLLNLQQGKPTRRFNWTMTINPRLDTSPENY HKWGPDRATVTTGNVGDKVHLRVEVQSLWRLPRSNAILFVIRCYLMNMNELVTVPKWARRFPRVLRTLPPELIDYKGLTR YRQTTIDWLSKFDDGEPTSPGTFPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40597; Mature: 40465
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAFKQETFRDDFSYRNSAENIRRFPFPFDRDEYMYAVNMEPHVKGQKGTAFENLIDID CCEEECHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH EHYVAEMRDRALVLKEDPLRYQALPHMMAAQWDTLELLMEEQAVGFPEHFTLARNGDQWR HHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCEE WINRPLGIDDTFTFGDRSTLPCEPLEYITRQAQGDFCIVDQRDGNLWMDAGMVTTQADWS EECCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEECCEEEECCCCE LDFDIGMNFMEWHGPVPLAHQMGVFDRALKFLLNLQQGKPTRRFNWTMTINPRLDTSPEN EEHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC YHKWGPDRATVTTGNVGDKVHLRVEVQSLWRLPRSNAILFVIRCYLMNMNELVTVPKWAR HHCCCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCCCCEEHHHHHHCHHHHCCCCHHHH RFPRVLRTLPPELIDYKGLTRYRQTTIDWLSKFDDGEPTSPGTFPD HHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AIAFKQETFRDDFSYRNSAENIRRFPFPFDRDEYMYAVNMEPHVKGQKGTAFENLIDID CEEECHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH EHYVAEMRDRALVLKEDPLRYQALPHMMAAQWDTLELLMEEQAVGFPEHFTLARNGDQWR HHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCEE WINRPLGIDDTFTFGDRSTLPCEPLEYITRQAQGDFCIVDQRDGNLWMDAGMVTTQADWS EECCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEECCEEEECCCCE LDFDIGMNFMEWHGPVPLAHQMGVFDRALKFLLNLQQGKPTRRFNWTMTINPRLDTSPEN EEHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC YHKWGPDRATVTTGNVGDKVHLRVEVQSLWRLPRSNAILFVIRCYLMNMNELVTVPKWAR HHCCCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCCCCEEHHHHHHCHHHHCCCCHHHH RFPRVLRTLPPELIDYKGLTRYRQTTIDWLSKFDDGEPTSPGTFPD HHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA